ACMS : Alternate Conformations in Main and Side Chains of Protein Structures

1DL8 Back

HEADER    DNA                                     08-DEC-99   1DL8              
TITLE     CRYSTAL STRUCTURE OF 5-F-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)           
TITLE    2 ACRIDINE-4-CARBOXAMIDE BOUND TO D(CGTACG)2                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-D(*CP*GP*TP*AP*CP*G)-3');                          
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES                                                       
KEYWDS    INTERCALATION, DNA, ACRIDINE                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.ADAMS,J.M.GUSS,C.A.COLLYER,W.A.DENNY,L.P.WAKELIN                    
REVDAT   3   24-FEB-09 1DL8    1       VERSN                                    
REVDAT   2   01-APR-03 1DL8    1       JRNL                                     
REVDAT   1   30-OCT-00 1DL8    0                                                
JRNL        AUTH   A.ADAMS,J.M.GUSS,C.A.COLLYER,W.A.DENNY,A.S.PRAKASH,          
JRNL        AUTH 2 L.P.WAKELIN                                                  
JRNL        TITL   ACRIDINECARBOXAMIDE TOPOISOMERASE POISONS:                   
JRNL        TITL 2 STRUCTURAL AND KINETIC STUDIES OF THE DNA                    
JRNL        TITL 3 COMPLEXES OF 5-SUBSTITUTED                                   
JRNL        TITL 4 9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-                
JRNL        TITL 5 CARBOXAMIDES.                                                
JRNL        REF    MOL.PHARMACOL.                V.  58   649 2000              
JRNL        REFN                   ISSN 0026-895X                               
JRNL        PMID   10953060                                                     
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.55 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : SHELXL-97                                            
REMARK   3   AUTHORS     : G.M.SHELDRICK                                        
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 16.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.3                           
REMARK   3   CROSS-VALIDATION METHOD           : FREE R                         
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (NO CUTOFF).                         
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : 0.216                  
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : 0.214                  
REMARK   3   FREE R VALUE                  (NO CUTOFF) : 0.269                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 8.300                  
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : 248                    
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : 2978                   
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F).                     
REMARK   3   R VALUE   (WORKING + TEST SET, F>4SIG(F)) : 0.209                  
REMARK   3   R VALUE          (WORKING SET, F>4SIG(F)) : 0.207                  
REMARK   3   FREE R VALUE                  (F>4SIG(F)) : 0.262                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 8.300                  
REMARK   3   FREE R VALUE TEST SET COUNT   (F>4SIG(F)) : 227                    
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (F>4SIG(F)) : 2720                   
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS      : 0                                             
REMARK   3   NUCLEIC ACID ATOMS : 120                                           
REMARK   3   HETEROGEN ATOMS    : 48                                            
REMARK   3   SOLVENT ATOMS      : 22                                            
REMARK   3                                                                      
REMARK   3  MODEL REFINEMENT.                                                   
REMARK   3   OCCUPANCY SUM OF NON-HYDROGEN ATOMS      : 174.38                  
REMARK   3   OCCUPANCY SUM OF HYDROGEN ATOMS          : NULL                    
REMARK   3   NUMBER OF DISCRETELY DISORDERED RESIDUES : 1                       
REMARK   3   NUMBER OF LEAST-SQUARES PARAMETERS       : 755                     
REMARK   3   NUMBER OF RESTRAINTS                     : 1032                    
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM RESTRAINT TARGET VALUES.                        
REMARK   3   BOND LENGTHS                         (A) : 0.012                   
REMARK   3   ANGLE DISTANCES                      (A) : 0.021                   
REMARK   3   SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL                    
REMARK   3   DISTANCES FROM RESTRAINT PLANES      (A) : NULL                    
REMARK   3   ZERO CHIRAL VOLUMES               (A**3) : NULL                    
REMARK   3   NON-ZERO CHIRAL VOLUMES           (A**3) : NULL                    
REMARK   3   ANTI-BUMPING DISTANCE RESTRAINTS     (A) : NULL                    
REMARK   3   RIGID-BOND ADP COMPONENTS         (A**2) : NULL                    
REMARK   3   SIMILAR ADP COMPONENTS            (A**2) : NULL                    
REMARK   3   APPROXIMATELY ISOTROPIC ADPS      (A**2) : NULL                    
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED: MOEWS & KRETSINGER: J.MOL.BIOL. 91(1973) 201-228      
REMARK   3                                                                      
REMARK   3  STEREOCHEMISTRY TARGET VALUES : NULL                                
REMARK   3   SPECIAL CASE: NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1DL8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-99.                  
REMARK 100 THE RCSB ID CODE IS RCSB010179.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 20-MAR-98                          
REMARK 200  TEMPERATURE           (KELVIN) : 110                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS II                    
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 3006                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.550                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.5                               
REMARK 200  DATA REDUNDANCY                : 9.600                              
REMARK 200  R MERGE                    (I) : 0.05500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200   FOR THE DATA SET  : 36.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.61                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.3                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.40                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.24300                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200   FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NDB ID DD0015                                        
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 56.60                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, SODIUM CACODYLATE, SPERMINE,        
REMARK 280  NACL, MGCL2, PH 6.5, VAPOR DIFFUSION, TEMPERATURE 291K              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z                                                 
REMARK 290       5555   Y,-X+Y,Z+1/3                                            
REMARK 290       6555   X-Y,X,Z+2/3                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       13.13333            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       26.26667            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       13.13333            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       26.26667            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       30.14000            
REMARK 350   BIOMT2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DC A1001   C5'    DC A1001   C4'     0.086                       
REMARK 500     DC A1001   C3'    DC A1001   C2'     0.094                       
REMARK 500     DC A1001   O4'    DC A1001   C1'     0.129                       
REMARK 500     DG A1002   C5'    DG A1002   C4'     0.107                       
REMARK 500     DG A1002   C3'    DG A1002   C2'     0.079                       
REMARK 500     DG A1002   C2'    DG A1002   C1'     0.071                       
REMARK 500     DG A1002   O4'    DG A1002   C1'     0.114                       
REMARK 500     DT A1003   C5'    DT A1003   C4'     0.111                       
REMARK 500     DT A1003   C2'    DT A1003   C1'     0.075                       
REMARK 500     DT A1003   O4'    DT A1003   C1'     0.124                       
REMARK 500     DA A1004   C5'    DA A1004   C4'     0.115                       
REMARK 500     DA A1004   O4'    DA A1004   C1'     0.114                       
REMARK 500     DC A1005   C5'    DC A1005   C4'     0.108                       
REMARK 500     DC A1005   C3'    DC A1005   C2'     0.076                       
REMARK 500     DC A1005   C2'    DC A1005   C1'     0.091                       
REMARK 500     DC A1005   O4'    DC A1005   C1'     0.090                       
REMARK 500     DG A1006   C5'    DG A1006   C4'     0.120                       
REMARK 500     DG A1006   C3'    DG A1006   C2'     0.072                       
REMARK 500     DG A1006   O4'    DG A1006   C1'     0.104                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC A1001   O5' -  C5' -  C4' ANGL. DEV. =  -6.1 DEGREES          
REMARK 500     DC A1001   O4' -  C4' -  C3' ANGL. DEV. =   6.4 DEGREES          
REMARK 500     DC A1001   C4' -  C3' -  C2' ANGL. DEV. =  -8.8 DEGREES          
REMARK 500     DC A1001   O4' -  C1' -  C2' ANGL. DEV. =  -5.9 DEGREES          
REMARK 500     DC A1001   N1  -  C1' -  C2' ANGL. DEV. =  12.3 DEGREES          
REMARK 500     DG A1002   O5' -  C5' -  C4' ANGL. DEV. =  -5.4 DEGREES          
REMARK 500     DG A1002   O4' -  C4' -  C3' ANGL. DEV. =   4.9 DEGREES          
REMARK 500     DG A1002   C4' -  C3' -  C2' ANGL. DEV. =  -7.6 DEGREES          
REMARK 500     DG A1002   O4' -  C1' -  C2' ANGL. DEV. =  -6.4 DEGREES          
REMARK 500     DG A1002   O4' -  C1' -  N9  ANGL. DEV. =  -7.8 DEGREES          
REMARK 500     DG A1002   C6  -  N1  -  C2  ANGL. DEV. =  -4.4 DEGREES          
REMARK 500     DT A1003   O5' -  C5' -  C4' ANGL. DEV. = -11.3 DEGREES          
REMARK 500     DT A1003   O4' -  C4' -  C3' ANGL. DEV. =   6.3 DEGREES          
REMARK 500     DT A1003   C4' -  C3' -  C2' ANGL. DEV. =  -5.2 DEGREES          
REMARK 500     DT A1003   O4' -  C1' -  C2' ANGL. DEV. =  -7.6 DEGREES          
REMARK 500     DT A1003   C2  -  N3  -  C4  ANGL. DEV. =   4.1 DEGREES          
REMARK 500     DT A1003   N3  -  C2  -  O2  ANGL. DEV. =   5.3 DEGREES          
REMARK 500     DG A1002   C3' -  O3' -  P   ANGL. DEV. =  -8.5 DEGREES          
REMARK 500     DA A1004   O5' -  C5' -  C4' ANGL. DEV. =  -8.2 DEGREES          
REMARK 500     DA A1004   O4' -  C4' -  C3' ANGL. DEV. =   8.4 DEGREES          
REMARK 500     DA A1004   C4' -  C3' -  C2' ANGL. DEV. =  -5.4 DEGREES          
REMARK 500     DA A1004   O4' -  C1' -  C2' ANGL. DEV. =  -5.4 DEGREES          
REMARK 500     DA A1004   O4' -  C1' -  N9  ANGL. DEV. =  -8.0 DEGREES          
REMARK 500     DA A1004   N7  -  C8  -  N9  ANGL. DEV. =  -3.2 DEGREES          
REMARK 500     DC A1005   O5' -  C5' -  C4' ANGL. DEV. =  -7.4 DEGREES          
REMARK 500     DC A1005   O4' -  C4' -  C3' ANGL. DEV. =   6.7 DEGREES          
REMARK 500     DC A1005   C4' -  C3' -  C2' ANGL. DEV. =  -4.8 DEGREES          
REMARK 500     DC A1005   O4' -  C1' -  C2' ANGL. DEV. =  -8.0 DEGREES          
REMARK 500     DC A1005   O4' -  C1' -  N1  ANGL. DEV. =   4.6 DEGREES          
REMARK 500     DC A1005   C6  -  N1  -  C2  ANGL. DEV. =   5.4 DEGREES          
REMARK 500     DC A1005   N3  -  C4  -  C5  ANGL. DEV. =   4.3 DEGREES          
REMARK 500     DC A1005   C5  -  C6  -  N1  ANGL. DEV. =  -4.4 DEGREES          
REMARK 500     DC A1005   C5  -  C4  -  N4  ANGL. DEV. =  -5.2 DEGREES          
REMARK 500     DG A1006   O5' -  C5' -  C4' ANGL. DEV. =  -5.0 DEGREES          
REMARK 500     DG A1006   P   -  O5' -  C5' ANGL. DEV. = -12.3 DEGREES          
REMARK 500     DG A1006   O4' -  C4' -  C3' ANGL. DEV. =   5.9 DEGREES          
REMARK 500     DG A1006   C4' -  C3' -  C2' ANGL. DEV. =  -5.7 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DA7 A 3014                
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DA7 A 3015                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: DD0015   RELATED DB: NDB                                 
REMARK 900 9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-CARBOXAMIDE             
REMARK 900 BOUND TO D(CGTACG)2                                                  
REMARK 900 RELATED ID: DDB074   RELATED DB: NDB                                 
REMARK 900 6-BR-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-                   
REMARK 900 CARBOXAMIDE BOUND TO D(CG(5-BRU)ACG)2                                
DBREF  1DL8 A 1001  1006  PDB    1DL8     1DL8          1001   1006             
SEQRES   1 A    6   DC  DG  DT  DA  DC  DG                                      
HET    DA7  A3014      24                                                       
HET    DA7  A3015      24                                                       
HETNAM     DA7 5-FLUORO-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-           
HETNAM   2 DA7  CARBOXAMIDE                                                     
FORMUL   2  DA7    2(C18 H19 F N4 O)                                            
FORMUL   4  HOH   *22(H2 O)                                                     
SITE     1 AC1  8  DC A1001   DG A1002   DA A1004   DC A1005                    
SITE     2 AC1  8  DG A1006  DA7 A3015  HOH A4007  HOH A4014                    
SITE     1 AC2  5  DC A1001   DC A1005   DG A1006  DA7 A3014                    
SITE     2 AC2  5 HOH A4018                                                     
CRYST1   30.140   30.140   39.400  90.00  90.00 120.00 P 64          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.033178  0.019156  0.000000        0.00000                         
SCALE2      0.000000  0.038311  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.025381        0.00000                         
ATOM      1  O5'  DC A1001      20.233  10.705  27.131  1.00 14.45           O  
ATOM      2  C5'  DC A1001      19.357  11.811  27.329  1.00 15.30           C  
ATOM      3  C4'  DC A1001      18.547  11.889  25.954  1.00 16.26           C  
ATOM      4  O4'  DC A1001      19.316  12.290  24.812  1.00 16.97           O  
ATOM      5  C3'  DC A1001      17.693  10.597  25.678  1.00 14.61           C  
ATOM      6  O3'  DC A1001      16.484  10.904  26.381  1.00 14.54           O  
ATOM      7  C2'  DC A1001      17.417  10.992  24.140  1.00 16.23           C  
ATOM      8  C1'  DC A1001      18.793  11.519  23.574  1.00 18.28           C  
ATOM      9  N1   DC A1001      19.878  10.726  23.109  1.00 13.17           N  
ATOM     10  C2   DC A1001      20.015  10.735  21.733  1.00 10.24           C  
ATOM     11  O2   DC A1001      19.230  11.382  21.021  1.00 15.82           O  
ATOM     12  N3   DC A1001      21.028  10.007  21.183  1.00 11.43           N  
ATOM     13  C4   DC A1001      21.863   9.315  21.957  1.00 13.52           C  
ATOM     14  N4   DC A1001      22.843   8.617  21.364  1.00 16.00           N  
ATOM     15  C5   DC A1001      21.739   9.298  23.404  1.00 16.80           C  
ATOM     16  C6   DC A1001      20.726  10.025  23.909  1.00 12.11           C  
ATOM     17  P    DG A1002      15.495   9.646  26.688  1.00 19.85           P  
ATOM     18  OP1  DG A1002      14.379  10.066  27.568  1.00 19.23           O  
ATOM     19  OP2  DG A1002      16.328   8.509  27.113  1.00 18.77           O  
ATOM     20  O5'  DG A1002      14.897   9.401  25.222  1.00 17.27           O  
ATOM     21  C5'  DG A1002      13.891   8.421  25.176  1.00 20.87           C  
ATOM     22  C4'  DG A1002      13.362   8.476  23.647  1.00 24.05           C  
ATOM     23  O4'  DG A1002      14.322   7.992  22.660  1.00 19.34           O  
ATOM     24  C3'  DG A1002      12.002   7.672  23.553  1.00 19.24           C  
ATOM     25  O3'  DG A1002      11.425   8.235  22.397  1.00 18.13           O  
ATOM     26  C2'  DG A1002      12.692   6.306  23.096  1.00 22.81           C  
ATOM     27  C1'  DG A1002      13.840   6.666  22.057  1.00 22.24           C  
ATOM     28  N9   DG A1002      15.116   5.831  22.183  1.00 16.97           N  
ATOM     29  C8   DG A1002      15.769   5.412  23.331  1.00 15.93           C  
ATOM     30  N7   DG A1002      16.860   4.696  23.067  1.00 20.84           N  
ATOM     31  C5   DG A1002      16.899   4.659  21.670  1.00 15.35           C  
ATOM     32  C6   DG A1002      17.835   4.040  20.820  1.00 15.42           C  
ATOM     33  O6   DG A1002      18.837   3.387  21.111  1.00 16.20           O  
ATOM     34  N1   DG A1002      17.565   4.207  19.440  1.00 12.13           N  
ATOM     35  C2   DG A1002      16.475   4.918  19.023  1.00 17.01           C  
ATOM     36  N2   DG A1002      16.305   5.019  17.676  1.00 11.10           N  
ATOM     37  N3   DG A1002      15.594   5.501  19.808  1.00 19.33           N  
ATOM     38  C4   DG A1002      15.849   5.343  21.136  1.00 16.25           C  
ATOM     39  P    DT A1003       9.913   7.665  22.152  1.00 23.22           P  
ATOM     40  OP1  DT A1003       9.087   8.804  21.746  1.00 25.54           O  
ATOM     41  OP2  DT A1003       9.557   6.774  23.262  1.00 27.63           O  
ATOM     42  O5'  DT A1003      10.224   6.723  20.885  1.00 18.43           O  
ATOM     43  C5'  DT A1003      10.600   7.356  19.691  1.00 13.00           C  
ATOM     44  C4'  DT A1003      10.709   6.034  18.755  1.00 22.52           C  
ATOM     45  O4'  DT A1003      11.919   5.278  19.022  1.00 30.00           O  
ATOM     46  C3'  DT A1003       9.408   5.167  18.944  1.00 28.57           C  
ATOM     47  O3'  DT A1003       9.284   4.638  17.632  1.00 37.57           O  
ATOM     48  C2'  DT A1003      10.072   4.006  19.801  1.00 22.44           C  
ATOM     49  C1'  DT A1003      11.543   3.794  19.225  1.00 23.11           C  
ATOM     50  N1   DT A1003      12.557   3.179  20.009  1.00 26.24           N  
ATOM     51  C2   DT A1003      13.590   2.643  19.228  1.00 22.78           C  
ATOM     52  O2   DT A1003      13.556   2.730  18.000  1.00 19.74           O  
ATOM     53  N3   DT A1003      14.550   2.063  19.991  1.00 17.57           N  
ATOM     54  C4   DT A1003      14.662   1.923  21.345  1.00 17.10           C  
ATOM     55  O4   DT A1003      15.625   1.354  21.829  1.00 26.93           O  
ATOM     56  C5   DT A1003      13.554   2.502  22.081  1.00 21.77           C  
ATOM     57  C7   DT A1003      13.516   2.443  23.601  1.00 26.25           C  
ATOM     58  C6   DT A1003      12.579   3.091  21.369  1.00 23.65           C  
ATOM     59  P    DA A1004       7.844   4.664  16.853  1.00 35.06           P  
ATOM     60  OP1  DA A1004       7.504   6.044  16.546  1.00 49.72           O  
ATOM     61  OP2  DA A1004       6.997   3.680  17.561  1.00 28.04           O  
ATOM     62  O5'  DA A1004       8.289   3.947  15.484  1.00 26.40           O  
ATOM     63  C5'  DA A1004       9.187   4.536  14.588  1.00 29.84           C  
ATOM     64  C4'  DA A1004       9.865   3.222  13.910  1.00 14.86           C  
ATOM     65  O4'  DA A1004      10.762   2.533  14.813  1.00 15.74           O  
ATOM     66  C3'  DA A1004       8.758   2.323  13.295  1.00 16.10           C  
ATOM     67  O3'  DA A1004       9.362   1.860  12.101  1.00 14.48           O  
ATOM     68  C2'  DA A1004       8.876   1.141  14.340  1.00 12.91           C  
ATOM     69  C1'  DA A1004      10.363   1.052  14.856  1.00 19.32           C  
ATOM     70  N9   DA A1004      10.536   0.777  16.334  1.00 16.98           N  
ATOM     71  C8   DA A1004       9.670   1.077  17.365  1.00 17.17           C  
ATOM     72  N7   DA A1004      10.168   0.684  18.519  1.00 15.44           N  
ATOM     73  C5   DA A1004      11.408   0.100  18.234  1.00 17.85           C  
ATOM     74  C6   DA A1004      12.429  -0.506  19.019  1.00 12.40           C  
ATOM     75  N6   DA A1004      12.284  -0.603  20.352  1.00 17.16           N  
ATOM     76  N1   DA A1004      13.527  -0.975  18.422  1.00 13.88           N  
ATOM     77  C2   DA A1004      13.641  -0.863  17.092  1.00 10.38           C  
ATOM     78  N3   DA A1004      12.739  -0.306  16.230  1.00 18.86           N  
ATOM     79  C4   DA A1004      11.650   0.154  16.885  1.00 16.50           C  
ATOM     80  P    DC A1005       8.550   0.779  11.149  1.00 17.31           P  
ATOM     81  OP1  DC A1005       9.001   1.080   9.760  1.00 18.34           O  
ATOM     82  OP2  DC A1005       7.143   0.802  11.565  1.00 19.25           O  
ATOM     83  O5'  DC A1005       9.203  -0.597  11.570  1.00 13.64           O  
ATOM     84  C5'  DC A1005      10.545  -0.776  11.167  1.00 14.75           C  
ATOM     85  C4'  DC A1005      10.924  -2.183  11.875  1.00 14.53           C  
ATOM     86  O4'  DC A1005      11.007  -2.004  13.336  1.00 14.68           O  
ATOM     87  C3'  DC A1005       9.908  -3.274  11.463  1.00 14.24           C  
ATOM     88  O3'  DC A1005      10.671  -4.444  11.287  1.00 14.30           O  
ATOM     89  C2'  DC A1005       9.191  -3.430  12.878  1.00 11.67           C  
ATOM     90  C1'  DC A1005      10.366  -3.221  13.958  1.00 14.57           C  
ATOM     91  N1   DC A1005      10.009  -3.023  15.316  1.00 11.72           N  
ATOM     92  C2   DC A1005      10.976  -3.437  16.211  1.00 12.47           C  
ATOM     93  O2   DC A1005      12.037  -3.926  15.851  1.00 13.78           O  
ATOM     94  N3   DC A1005      10.709  -3.289  17.545  1.00 11.34           N  
ATOM     95  C4   DC A1005       9.538  -2.748  17.883  1.00 15.17           C  
ATOM     96  N4   DC A1005       9.249  -2.582  19.207  1.00 17.42           N  
ATOM     97  C5   DC A1005       8.530  -2.313  16.991  1.00 10.05           C  
ATOM     98  C6   DC A1005       8.796  -2.464  15.646  1.00 12.01           C  
ATOM     99  P    DG A1006      10.107  -5.509  10.175  1.00 18.84           P  
ATOM    100  OP1  DG A1006      10.731  -5.137   8.853  1.00 22.53           O  
ATOM    101  OP2  DG A1006       8.657  -5.552  10.302  1.00 15.88           O  
ATOM    102  O5'  DG A1006      10.852  -6.826  10.587  1.00 18.36           O  
ATOM    103  C5'  DG A1006      10.363  -7.246  11.797  1.00 16.62           C  
ATOM    104  C4'  DG A1006      10.795  -8.817  11.885  1.00 20.17           C  
ATOM    105  O4'  DG A1006      10.502  -9.222  13.268  1.00 19.82           O  
ATOM    106  C3'  DG A1006       9.965  -9.645  10.847  1.00 21.74           C  
ATOM    107  O3'  DG A1006      10.669 -10.876  10.774  1.00 25.49           O  
ATOM    108  C2'  DG A1006       8.733  -9.951  11.805  1.00 23.83           C  
ATOM    109  C1'  DG A1006       9.318 -10.181  13.248  1.00 20.94           C  
ATOM    110  N9   DG A1006       8.430  -9.706  14.393  1.00 18.61           N  
ATOM    111  C8   DG A1006       7.236  -9.055  14.374  1.00 14.01           C  
ATOM    112  N7   DG A1006       6.748  -8.796  15.577  1.00 16.43           N  
ATOM    113  C5   DG A1006       7.712  -9.328  16.432  1.00 18.41           C  
ATOM    114  C6   DG A1006       7.743  -9.353  17.844  1.00 14.61           C  
ATOM    115  O6   DG A1006       6.885  -8.891  18.632  1.00 12.51           O  
ATOM    116  N1   DG A1006       8.905  -9.988  18.334  1.00 13.76           N  
ATOM    117  C2   DG A1006       9.888 -10.521  17.538  1.00  7.69           C  
ATOM    118  N2   DG A1006      10.968 -11.112  18.137  1.00 13.89           N  
ATOM    119  N3   DG A1006       9.863 -10.497  16.205  1.00 10.36           N  
ATOM    120  C4   DG A1006       8.751  -9.887  15.723  1.00 14.24           C  
TER     121       DG A1006                                                      
HETATM  122  C8  DA7 A3014      19.714   7.034  15.752  1.00 14.78           C  
HETATM  123  C7  DA7 A3014      20.838   6.469  15.181  1.00 12.96           C  
HETATM  124  C6  DA7 A3014      21.835   5.908  15.986  1.00 14.84           C  
HETATM  125  C5  DA7 A3014      21.656   5.863  17.363  1.00 16.62           C  
HETATM  126  F   DA7 A3014      22.574   5.193  18.155  1.00 25.11           F  
HETATM  127  N10 DA7 A3014      20.448   6.373  19.297  1.00 15.38           N  
HETATM  128  C4  DA7 A3014      19.412   6.980  21.380  1.00 25.87           C  
HETATM  129  C3  DA7 A3014      18.328   7.605  22.028  1.00 23.05           C  
HETATM  130  C2  DA7 A3014      17.345   8.268  21.342  1.00 21.43           C  
HETATM  131  C1  DA7 A3014      17.402   8.316  19.968  1.00 21.42           C  
HETATM  132  C13 DA7 A3014      19.538   7.047  17.165  1.00 18.42           C  
HETATM  133  C14 DA7 A3014      20.540   6.420  17.977  1.00 19.79           C  
HETATM  134  C12 DA7 A3014      19.493   7.011  19.954  1.00 22.60           C  
HETATM  135  C11 DA7 A3014      18.440   7.706  19.242  1.00 19.78           C  
HETATM  136  C9  DA7 A3014      18.489   7.735  17.820  1.00 18.90           C  
HETATM  137  N9  DA7 A3014      17.489   8.311  17.109  1.00 21.55           N  
HETATM  138  C15 DA7 A3014      20.379   6.131  22.229  1.00 27.25           C  
HETATM  139  O15 DA7 A3014      21.364   5.625  21.687  1.00 19.70           O  
HETATM  140  N16 DA7 A3014      20.113   5.934  23.550  1.00 38.95           N  
HETATM  141  C17 DA7 A3014      21.061   5.133  24.373  1.00 29.98           C  
HETATM  142  C18 DA7 A3014      20.848   3.630  24.122  0.50 26.71           C  
HETATM  143  N19 DA7 A3014      19.390   3.297  23.936  0.50 24.39           N  
HETATM  144  C20 DA7 A3014      19.241   1.880  23.480  0.50 14.30           C  
HETATM  145  C21 DA7 A3014      18.627   3.558  25.202  0.50 29.50           C  
HETATM  146  C8 ADA7 A3015       9.021 -13.845  22.131  0.50 26.57           C  
HETATM  147  C7 ADA7 A3015       8.408 -13.508  23.333  0.50 26.23           C  
HETATM  148  C6 ADA7 A3015       7.174 -12.877  23.329  0.50 20.18           C  
HETATM  149  C5 ADA7 A3015       6.602 -12.452  22.132  0.50  9.85           C  
HETATM  150  F  ADA7 A3015       5.346 -11.852  22.172  0.50 13.40           F  
HETATM  151  N10ADA7 A3015       6.566 -12.483  19.813  0.50 14.11           N  
HETATM  152  C4 ADA7 A3015       6.299 -12.292  17.472  0.50 14.75           C  
HETATM  153  C3 ADA7 A3015       6.840 -12.550  16.202  0.50 17.95           C  
HETATM  154  C2 ADA7 A3015       8.038 -13.211  16.059  0.50 10.09           C  
HETATM  155  C1 ADA7 A3015       8.762 -13.630  17.150  0.50 12.18           C  
HETATM  156  C13ADA7 A3015       8.447 -13.477  20.894  0.50 14.07           C  
HETATM  157  C14ADA7 A3015       7.168 -12.835  20.917  0.50  8.93           C  
HETATM  158  C12ADA7 A3015       7.092 -12.671  18.613  0.50  8.03           C  
HETATM  159  C11ADA7 A3015       8.308 -13.429  18.464  0.50 15.27           C  
HETATM  160  C9 ADA7 A3015       8.985 -13.872  19.635  0.50  7.33           C  
HETATM  161  N9 ADA7 A3015      10.204 -14.460  19.647  0.50 11.23           N  
HETATM  162  C15ADA7 A3015       4.973 -11.506  17.651  0.50 21.65           C  
HETATM  163  O15ADA7 A3015       4.446 -11.452  18.775  0.50 11.66           O  
HETATM  164  N16ADA7 A3015       4.388 -10.838  16.626  0.50 23.07           N  
HETATM  165  C17ADA7 A3015       3.098 -10.139  16.766  0.38 15.30           C  
HETATM  166  C18ADA7 A3015       3.232  -8.620  16.917  0.38 12.58           C  
HETATM  167  N19ADA7 A3015       4.180  -7.949  15.964  0.38 10.47           N  
HETATM  168  C20ADA7 A3015       3.567  -7.709  14.628  0.38 17.78           C  
HETATM  169  C21ADA7 A3015       4.763  -6.692  16.520  0.38 18.80           C  
HETATM  170  O   HOH A4001      22.864  11.696  26.721  1.00 12.26           O  
HETATM  171  O   HOH A4002      11.846   9.857  28.011  1.00 14.55           O  
HETATM  172  O   HOH A4003      13.046  -5.880   7.578  1.00 17.62           O  
HETATM  173  O   HOH A4004      12.152 -12.662  12.695  1.00 18.94           O  
HETATM  174  O   HOH A4005      14.238   7.720  18.823  1.00 27.27           O  
HETATM  175  O   HOH A4006      19.993   8.944  29.279  1.00 23.62           O  
HETATM  176  O   HOH A4007      18.582   7.288  25.556  1.00 24.25           O  
HETATM  177  O   HOH A4008       6.804  -6.854  11.886  1.00 34.18           O  
HETATM  178  O   HOH A4009       6.846  -4.139   9.672  1.00 39.67           O  
HETATM  179  O   HOH A4010       9.626   0.373  20.932  1.00 28.39           O  
HETATM  180  O   HOH A4011      15.032   6.616  28.210  1.00 26.48           O  
HETATM  181  O   HOH A4012      17.382   8.677  29.625  1.00 25.57           O  
HETATM  182  O   HOH A4013       6.256  -1.190  13.542  1.00 31.33           O  
HETATM  183  O   HOH A4014      24.095   5.418  21.545  1.00 33.81           O  
HETATM  184  O   HOH A4015       9.965 -14.142  13.263  1.00 22.81           O  
HETATM  185  O   HOH A4016       6.683  -1.933  20.054  1.00 36.58           O  
HETATM  186  O   HOH A4017       6.472   0.762  17.090  1.00 34.50           O  
HETATM  187  O   HOH A4018      10.612  -2.634   8.554  1.00 23.75           O  
HETATM  188  O   HOH A4019       8.445  -0.862   7.786  1.00 18.74           O  
HETATM  189  O   HOH A4020      12.997   5.790  26.459  0.50 23.35           O  
HETATM  190  O   HOH A4021      14.069   4.801  26.499  0.50 21.35           O  
HETATM  191  O   HOH A4022       5.560  -4.700  13.912  1.00 32.95           O  
CONECT  122  123  132                                                           
CONECT  123  122  124                                                           
CONECT  124  123  125                                                           
CONECT  125  124  126  133                                                      
CONECT  126  125                                                                
CONECT  127  133  134                                                           
CONECT  128  129  134  138                                                      
CONECT  129  128  130                                                           
CONECT  130  129  131                                                           
CONECT  131  130  135                                                           
CONECT  132  122  133  136                                                      
CONECT  133  125  127  132                                                      
CONECT  134  127  128  135                                                      
CONECT  135  131  134  136                                                      
CONECT  136  132  135  137                                                      
CONECT  137  136                                                                
CONECT  138  128  139  140                                                      
CONECT  139  138                                                                
CONECT  140  138  141                                                           
CONECT  141  140  142                                                           
CONECT  142  141  143                                                           
CONECT  143  142  144  145                                                      
CONECT  144  143                                                                
CONECT  145  143                                                                
CONECT  146  147  156                                                           
CONECT  147  146  148                                                           
CONECT  148  147  149                                                           
CONECT  149  148  150  157                                                      
CONECT  150  149                                                                
CONECT  151  157  158                                                           
CONECT  152  153  158  162                                                      
CONECT  153  152  154                                                           
CONECT  154  153  155                                                           
CONECT  155  154  159                                                           
CONECT  156  146  157  160                                                      
CONECT  157  149  151  156                                                      
CONECT  158  151  152  159                                                      
CONECT  159  155  158  160                                                      
CONECT  160  156  159  161                                                      
CONECT  161  160                                                                
CONECT  162  152  163  164                                                      
CONECT  163  162                                                                
CONECT  164  162  165                                                           
CONECT  165  164  166                                                           
CONECT  166  165  167                                                           
CONECT  167  166  168  169                                                      
CONECT  168  167                                                                
CONECT  169  167                                                                
MASTER      295    0    2    0    0    0    4    6  190    1   48    1          
END