1S23
HEADER DNA 08-JAN-04 1S23 TITLE CRYSTAL STRUCTURE ANALYSIS OF THE B-DNA DECAMER CGCAATTGCG COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS DEOXYOLIGONUCLEOTIDE, COBALT, VARIABILITY, DNA EXPDTA X-RAY DIFFRACTION AUTHOR N.VALLS,G.WRIGHT,R.A.STEINER,G.N.MURSHUDOV,J.A.SUBIRANA REVDAT 3 14-FEB-24 1S23 1 REMARK LINK REVDAT 2 24-FEB-09 1S23 1 VERSN REVDAT 1 06-APR-04 1S23 0 JRNL AUTH N.VALLS,G.WRIGHT,R.A.STEINER,G.N.MURSHUDOV,J.A.SUBIRANA JRNL TITL DNA VARIABILITY IN FIVE CRYSTAL STRUCTURES OF D(CGCAATTGCG). JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 680 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 15039556 JRNL DOI 10.1107/S0907444904002896 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.19 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 3746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 414 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 221 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4590 REMARK 3 BIN FREE R VALUE SET COUNT : 26 REMARK 3 BIN FREE R VALUE : 0.4160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 202 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 2.26000 REMARK 3 B33 (A**2) : -2.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.747 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 238 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 101 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 369 ; 2.595 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): 258 ; 1.431 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 33 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 117 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 20 ; 0.130 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 102 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 51 ; 0.098 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 18 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.279 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 16 ; 0.354 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 238 ; 2.305 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 369 ; 3.387 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1S23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021269. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.917 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4174 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23000 REMARK 200 R SYM FOR SHELL (I) : 0.60000 REMARK 200 FOR SHELL : 2.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NDB ENTRY UDJ031 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, ACRIDINE(RGR), CACODYLATE, REMARK 280 CALCIUM CHLORIDE, COBALT CHLORIDE, SPERMINE , PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 13.11000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.16800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.17950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.16800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 13.11000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.17950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 13.11000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 22.17950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 26.16800 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 22.17950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 13.11000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 26.16800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 88.71800 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 26.16800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CO CO A 300 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 322 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 323 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 334 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 1 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC A 3 C2 - N3 - C4 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC A 3 N3 - C4 - C5 ANGL. DEV. = -3.6 DEGREES REMARK 500 DA A 4 O4' - C1' - N9 ANGL. DEV. = -5.0 DEGREES REMARK 500 DA A 5 O4' - C1' - N9 ANGL. DEV. = -5.4 DEGREES REMARK 500 DT A 6 O4' - C1' - N1 ANGL. DEV. = -5.2 DEGREES REMARK 500 DT A 6 C2 - N3 - C4 ANGL. DEV. = 3.8 DEGREES REMARK 500 DT A 7 C6 - C5 - C7 ANGL. DEV. = -3.9 DEGREES REMARK 500 DG A 8 O4' - C1' - N9 ANGL. DEV. = -5.0 DEGREES REMARK 500 DC A 9 P - O5' - C5' ANGL. DEV. = -18.2 DEGREES REMARK 500 DC A 9 P - O5' - C5' ANGL. DEV. = 15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 300 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 10 N7 REMARK 620 2 DG A 10 N7 176.9 REMARK 620 3 HOH A 324 O 95.7 82.3 REMARK 620 4 HOH A 324 O 82.5 95.4 96.8 REMARK 620 5 HOH A 325 O 95.1 87.2 166.6 92.5 REMARK 620 6 HOH A 325 O 87.6 94.9 92.7 166.8 79.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 300 DBREF 1S23 A 1 10 PDB 1S23 1S23 1 10 SEQRES 1 A 10 DC DG DC DA DA DT DT DG DC DG HET CO A 300 1 HETNAM CO COBALT (II) ION FORMUL 2 CO CO 2+ FORMUL 3 HOH *46(H2 O) LINK N7 DG A 10 CO CO A 300 1555 1555 2.18 LINK N7 DG A 10 CO CO A 300 6675 1555 2.18 LINK CO CO A 300 O HOH A 324 1555 1555 1.98 LINK CO CO A 300 O HOH A 324 1555 6675 1.98 LINK CO CO A 300 O HOH A 325 1555 1555 1.94 LINK CO CO A 300 O HOH A 325 1555 6675 1.94 SITE 1 AC1 3 DG A 10 HOH A 324 HOH A 325 CRYST1 26.220 44.359 52.336 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.038139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022543 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019107 0.00000 ATOM 1 O5' DC A 1 24.424 49.478 26.375 1.00 61.53 O ATOM 2 C5' DC A 1 25.269 50.557 26.833 1.00 59.46 C ATOM 3 C4' DC A 1 26.391 50.097 27.764 1.00 58.35 C ATOM 4 O4' DC A 1 25.967 50.213 29.153 1.00 57.30 O ATOM 5 C3' DC A 1 26.889 48.654 27.580 1.00 56.72 C ATOM 6 O3' DC A 1 28.271 48.642 27.200 1.00 53.93 O ATOM 7 C2' DC A 1 26.708 47.968 28.930 1.00 56.41 C ATOM 8 C1' DC A 1 25.825 48.928 29.731 1.00 56.01 C ATOM 9 N1 DC A 1 24.352 48.519 29.779 1.00 54.44 N ATOM 10 C2 DC A 1 24.008 47.329 30.460 1.00 54.33 C ATOM 11 O2 DC A 1 24.909 46.625 30.991 1.00 56.49 O ATOM 12 N3 DC A 1 22.685 46.975 30.502 1.00 51.85 N ATOM 13 C4 DC A 1 21.736 47.744 29.921 1.00 50.80 C ATOM 14 N4 DC A 1 20.458 47.345 29.993 1.00 46.24 N ATOM 15 C5 DC A 1 22.078 48.960 29.236 1.00 51.66 C ATOM 16 C6 DC A 1 23.378 49.309 29.200 1.00 52.69 C ATOM 17 P DG A 2 28.710 47.915 25.838 1.00 50.01 P ATOM 18 OP1 DG A 2 30.176 47.732 25.958 1.00 53.56 O ATOM 19 OP2 DG A 2 28.102 48.610 24.680 1.00 48.11 O ATOM 20 O5' DG A 2 28.055 46.447 26.011 1.00 43.58 O ATOM 21 C5' DG A 2 28.564 45.475 26.907 1.00 40.03 C ATOM 22 C4' DG A 2 28.508 44.113 26.244 1.00 35.74 C ATOM 23 O4' DG A 2 27.125 43.698 26.052 1.00 33.30 O ATOM 24 C3' DG A 2 29.119 44.130 24.863 1.00 34.49 C ATOM 25 O3' DG A 2 29.756 42.895 24.687 1.00 35.76 O ATOM 26 C2' DG A 2 27.919 44.343 23.932 1.00 33.24 C ATOM 27 C1' DG A 2 26.782 43.655 24.676 1.00 30.82 C ATOM 28 N9 DG A 2 25.480 44.316 24.572 1.00 28.37 N ATOM 29 C8 DG A 2 25.188 45.649 24.602 1.00 28.10 C ATOM 30 N7 DG A 2 23.930 45.924 24.502 1.00 27.16 N ATOM 31 C5 DG A 2 23.329 44.680 24.476 1.00 26.96 C ATOM 32 C6 DG A 2 21.963 44.331 24.412 1.00 25.58 C ATOM 33 O6 DG A 2 20.986 45.080 24.377 1.00 24.50 O ATOM 34 N1 DG A 2 21.781 42.940 24.410 1.00 22.76 N ATOM 35 C2 DG A 2 22.788 41.998 24.441 1.00 23.71 C ATOM 36 N2 DG A 2 22.405 40.689 24.426 1.00 21.08 N ATOM 37 N3 DG A 2 24.061 42.330 24.494 1.00 25.44 N ATOM 38 C4 DG A 2 24.260 43.675 24.547 1.00 26.55 C ATOM 39 P DC A 3 30.508 42.454 23.359 1.00 38.49 P ATOM 40 OP1 DC A 3 31.456 41.472 23.932 1.00 37.84 O ATOM 41 OP2 DC A 3 30.899 43.613 22.527 1.00 38.07 O ATOM 42 O5' DC A 3 29.426 41.637 22.506 1.00 33.24 O ATOM 43 C5' DC A 3 28.878 40.469 23.079 1.00 32.17 C ATOM 44 C4' DC A 3 27.715 39.996 22.215 1.00 26.99 C ATOM 45 O4' DC A 3 26.680 40.974 22.336 1.00 26.28 O ATOM 46 C3' DC A 3 28.012 39.907 20.729 1.00 29.68 C ATOM 47 O3' DC A 3 28.179 38.575 20.366 1.00 31.69 O ATOM 48 C2' DC A 3 26.845 40.644 20.048 1.00 29.19 C ATOM 49 C1' DC A 3 25.880 40.870 21.187 1.00 26.66 C ATOM 50 N1 DC A 3 25.079 42.094 21.110 1.00 22.01 N ATOM 51 C2 DC A 3 23.698 42.004 21.199 1.00 22.38 C ATOM 52 O2 DC A 3 23.151 40.859 21.262 1.00 23.69 O ATOM 53 N3 DC A 3 22.982 43.157 21.164 1.00 22.66 N ATOM 54 C4 DC A 3 23.536 44.364 21.090 1.00 26.94 C ATOM 55 N4 DC A 3 22.741 45.488 21.071 1.00 25.39 N ATOM 56 C5 DC A 3 24.956 44.454 21.039 1.00 25.34 C ATOM 57 C6 DC A 3 25.669 43.338 21.064 1.00 24.52 C ATOM 58 P DA A 4 28.267 38.165 18.848 1.00 34.49 P ATOM 59 OP1 DA A 4 29.065 36.907 18.840 1.00 34.27 O ATOM 60 OP2 DA A 4 28.604 39.348 17.999 1.00 36.02 O ATOM 61 O5' DA A 4 26.782 37.736 18.459 1.00 31.47 O ATOM 62 C5' DA A 4 26.066 36.907 19.303 1.00 29.29 C ATOM 63 C4' DA A 4 24.711 36.612 18.670 1.00 28.79 C ATOM 64 O4' DA A 4 23.976 37.848 18.819 1.00 27.95 O ATOM 65 C3' DA A 4 24.676 36.273 17.182 1.00 30.35 C ATOM 66 O3' DA A 4 23.797 35.186 16.949 1.00 33.12 O ATOM 67 C2' DA A 4 24.222 37.577 16.547 1.00 26.65 C ATOM 68 C1' DA A 4 23.367 38.184 17.600 1.00 26.60 C ATOM 69 N9 DA A 4 23.346 39.637 17.634 1.00 23.40 N ATOM 70 C8 DA A 4 24.422 40.447 17.529 1.00 23.71 C ATOM 71 N7 DA A 4 24.135 41.716 17.618 1.00 24.32 N ATOM 72 C5 DA A 4 22.760 41.730 17.772 1.00 21.20 C ATOM 73 C6 DA A 4 21.858 42.791 17.857 1.00 24.64 C ATOM 74 N6 DA A 4 22.275 44.045 17.845 1.00 22.83 N ATOM 75 N1 DA A 4 20.553 42.513 17.953 1.00 24.57 N ATOM 76 C2 DA A 4 20.213 41.213 18.003 1.00 22.01 C ATOM 77 N3 DA A 4 20.971 40.100 17.874 1.00 26.50 N ATOM 78 C4 DA A 4 22.253 40.449 17.760 1.00 25.18 C ATOM 79 P DA A 5 23.464 34.587 15.482 1.00 36.90 P ATOM 80 OP1 DA A 5 23.172 33.152 15.653 1.00 36.79 O ATOM 81 OP2 DA A 5 24.447 35.065 14.497 1.00 36.73 O ATOM 82 O5' DA A 5 22.072 35.290 15.146 1.00 35.83 O ATOM 83 C5' DA A 5 21.051 35.344 16.093 1.00 33.94 C ATOM 84 C4' DA A 5 19.888 36.130 15.554 1.00 33.51 C ATOM 85 O4' DA A 5 20.145 37.568 15.703 1.00 31.53 O ATOM 86 C3' DA A 5 19.524 35.844 14.075 1.00 31.72 C ATOM 87 O3' DA A 5 18.133 35.532 14.048 1.00 35.13 O ATOM 88 C2' DA A 5 19.906 37.153 13.399 1.00 30.99 C ATOM 89 C1' DA A 5 19.735 38.194 14.494 1.00 28.64 C ATOM 90 N9 DA A 5 20.599 39.361 14.432 1.00 25.64 N ATOM 91 C8 DA A 5 21.954 39.321 14.306 1.00 27.13 C ATOM 92 N7 DA A 5 22.524 40.494 14.302 1.00 26.50 N ATOM 93 C5 DA A 5 21.450 41.363 14.445 1.00 22.56 C ATOM 94 C6 DA A 5 21.381 42.765 14.531 1.00 20.55 C ATOM 95 N6 DA A 5 22.460 43.559 14.449 1.00 23.61 N ATOM 96 N1 DA A 5 20.166 43.335 14.672 1.00 25.50 N ATOM 97 C2 DA A 5 19.097 42.535 14.746 1.00 23.38 C ATOM 98 N3 DA A 5 19.047 41.204 14.700 1.00 25.12 N ATOM 99 C4 DA A 5 20.264 40.681 14.551 1.00 24.98 C ATOM 100 P DT A 6 17.289 35.235 12.701 1.00 34.91 P ATOM 101 OP1 DT A 6 16.126 34.473 13.173 1.00 39.65 O ATOM 102 OP2 DT A 6 18.171 34.787 11.605 1.00 38.81 O ATOM 103 O5' DT A 6 16.728 36.676 12.325 1.00 31.50 O ATOM 104 C5' DT A 6 15.899 37.288 13.250 1.00 30.33 C ATOM 105 C4' DT A 6 15.587 38.695 12.828 1.00 32.49 C ATOM 106 O4' DT A 6 16.803 39.487 12.758 1.00 32.31 O ATOM 107 C3' DT A 6 14.923 38.800 11.451 1.00 34.08 C ATOM 108 O3' DT A 6 13.604 39.357 11.592 1.00 36.05 O ATOM 109 C2' DT A 6 15.900 39.662 10.651 1.00 31.56 C ATOM 110 C1' DT A 6 16.619 40.444 11.736 1.00 31.25 C ATOM 111 N1 DT A 6 17.988 40.916 11.482 1.00 26.09 N ATOM 112 C2 DT A 6 18.293 42.257 11.570 1.00 23.60 C ATOM 113 O2 DT A 6 17.509 43.162 11.815 1.00 26.40 O ATOM 114 N3 DT A 6 19.612 42.517 11.341 1.00 22.06 N ATOM 115 C4 DT A 6 20.645 41.688 11.049 1.00 22.67 C ATOM 116 O4 DT A 6 21.802 42.127 10.922 1.00 22.97 O ATOM 117 C5 DT A 6 20.265 40.303 10.992 1.00 24.51 C ATOM 118 C7 DT A 6 21.284 39.245 10.668 1.00 28.05 C ATOM 119 C6 DT A 6 18.971 39.998 11.181 1.00 24.42 C ATOM 120 P DT A 7 12.697 39.513 10.255 1.00 39.17 P ATOM 121 OP1 DT A 7 11.298 39.393 10.652 1.00 39.31 O ATOM 122 OP2 DT A 7 13.288 38.673 9.191 1.00 36.59 O ATOM 123 O5' DT A 7 12.962 41.046 9.885 1.00 34.87 O ATOM 124 C5' DT A 7 12.792 42.025 10.825 1.00 34.70 C ATOM 125 C4' DT A 7 13.218 43.377 10.275 1.00 34.49 C ATOM 126 O4' DT A 7 14.660 43.486 10.082 1.00 30.29 O ATOM 127 C3' DT A 7 12.589 43.711 8.927 1.00 33.23 C ATOM 128 O3' DT A 7 11.871 44.968 9.081 1.00 34.71 O ATOM 129 C2' DT A 7 13.760 43.732 7.953 1.00 33.06 C ATOM 130 C1' DT A 7 14.920 44.129 8.853 1.00 31.88 C ATOM 131 N1 DT A 7 16.324 43.694 8.501 1.00 27.56 N ATOM 132 C2 DT A 7 17.358 44.612 8.563 1.00 25.22 C ATOM 133 O2 DT A 7 17.176 45.771 8.843 1.00 25.78 O ATOM 134 N3 DT A 7 18.613 44.135 8.310 1.00 24.84 N ATOM 135 C4 DT A 7 18.942 42.837 7.978 1.00 25.21 C ATOM 136 O4 DT A 7 20.110 42.528 7.754 1.00 30.22 O ATOM 137 C5 DT A 7 17.811 41.931 7.915 1.00 25.30 C ATOM 138 C7 DT A 7 17.964 40.490 7.582 1.00 27.21 C ATOM 139 C6 DT A 7 16.586 42.409 8.195 1.00 23.74 C ATOM 140 P DG A 8 10.992 45.548 7.864 1.00 37.23 P ATOM 141 OP1 DG A 8 10.094 46.557 8.426 1.00 37.72 O ATOM 142 OP2 DG A 8 10.618 44.446 6.932 1.00 38.80 O ATOM 143 O5' DG A 8 12.109 46.367 7.067 1.00 36.90 O ATOM 144 C5' DG A 8 12.614 47.492 7.733 1.00 36.38 C ATOM 145 C4'A DG A 8 13.656 48.194 6.921 0.50 36.66 C ATOM 146 C4'B DG A 8 13.485 48.190 6.713 0.50 38.12 C ATOM 147 O4'A DG A 8 14.811 47.338 6.751 0.50 34.58 O ATOM 148 O4'B DG A 8 14.747 47.474 6.701 0.50 36.35 O ATOM 149 C3'A DG A 8 13.162 48.546 5.535 0.50 35.01 C ATOM 150 C3'B DG A 8 12.905 48.142 5.287 0.50 37.51 C ATOM 151 O3'A DG A 8 13.358 49.927 5.390 0.50 33.85 O ATOM 152 O3'B DG A 8 12.554 49.445 4.700 0.50 40.37 O ATOM 153 C2'A DG A 8 13.995 47.654 4.616 0.50 34.96 C ATOM 154 C2'B DG A 8 13.973 47.386 4.495 0.50 37.16 C ATOM 155 C1'A DG A 8 15.278 47.504 5.427 0.50 33.26 C ATOM 156 C1'B DG A 8 15.224 47.470 5.378 0.50 34.71 C ATOM 157 N9 DG A 8 16.170 46.363 5.247 1.00 31.59 N ATOM 158 C8 DG A 8 15.856 45.035 5.210 1.00 30.17 C ATOM 159 N7 DG A 8 16.872 44.261 5.089 1.00 26.33 N ATOM 160 C5 DG A 8 17.968 45.108 5.060 1.00 26.09 C ATOM 161 C6 DG A 8 19.351 44.797 4.962 1.00 26.33 C ATOM 162 O6 DG A 8 19.865 43.664 4.881 1.00 27.10 O ATOM 163 N1 DG A 8 20.127 45.949 4.970 1.00 26.84 N ATOM 164 C2 DG A 8 19.620 47.218 5.059 1.00 22.09 C ATOM 165 N2 DG A 8 20.503 48.257 5.058 1.00 23.34 N ATOM 166 N3 DG A 8 18.330 47.509 5.174 1.00 26.45 N ATOM 167 C4 DG A 8 17.555 46.407 5.170 1.00 26.66 C ATOM 168 P A DC A 9 12.578 50.802 4.289 0.50 30.29 P ATOM 169 P B DC A 9 12.765 49.609 3.127 0.50 37.26 P ATOM 170 OP1A DC A 9 12.336 52.082 4.982 0.50 34.58 O ATOM 171 OP1B DC A 9 11.527 49.849 2.387 0.50 40.38 O ATOM 172 OP2A DC A 9 11.592 50.006 3.628 0.50 26.57 O ATOM 173 OP2B DC A 9 13.545 48.420 2.730 0.50 40.73 O ATOM 174 O5' DC A 9 13.687 50.959 3.115 1.00 34.00 O ATOM 175 C5' DC A 9 14.826 51.433 3.823 1.00 28.47 C ATOM 176 C4' DC A 9 16.090 51.451 2.998 1.00 26.16 C ATOM 177 O4' DC A 9 16.741 50.174 3.067 1.00 24.60 O ATOM 178 C3' DC A 9 15.954 51.803 1.515 1.00 23.23 C ATOM 179 O3' DC A 9 16.952 52.736 1.205 1.00 22.83 O ATOM 180 C2' DC A 9 16.141 50.455 0.863 1.00 23.50 C ATOM 181 C1' DC A 9 17.225 49.860 1.771 1.00 21.57 C ATOM 182 N1 DC A 9 17.472 48.409 1.696 1.00 21.97 N ATOM 183 C2 DC A 9 18.777 47.910 1.735 1.00 21.98 C ATOM 184 O2 DC A 9 19.746 48.682 1.783 1.00 22.39 O ATOM 185 N3 DC A 9 18.930 46.540 1.726 1.00 21.50 N ATOM 186 C4 DC A 9 17.899 45.703 1.674 1.00 22.03 C ATOM 187 N4 DC A 9 18.153 44.376 1.644 1.00 22.56 N ATOM 188 C5 DC A 9 16.576 46.181 1.668 1.00 22.13 C ATOM 189 C6 DC A 9 16.405 47.513 1.699 1.00 20.98 C ATOM 190 P DG A 10 16.762 53.782 0.029 1.00 24.78 P ATOM 191 OP1 DG A 10 17.874 54.760 0.198 1.00 23.66 O ATOM 192 OP2 DG A 10 15.341 54.130 -0.019 1.00 25.30 O ATOM 193 O5' DG A 10 17.090 52.851 -1.221 1.00 25.19 O ATOM 194 C5' DG A 10 18.390 52.313 -1.441 1.00 24.41 C ATOM 195 C4' DG A 10 18.433 51.649 -2.819 1.00 23.75 C ATOM 196 O4' DG A 10 17.343 50.709 -3.013 1.00 22.56 O ATOM 197 C3' DG A 10 18.284 52.621 -4.000 1.00 23.73 C ATOM 198 O3' DG A 10 19.575 53.014 -4.562 1.00 25.20 O ATOM 199 C2' DG A 10 17.429 51.873 -5.011 1.00 23.90 C ATOM 200 C1' DG A 10 16.516 51.048 -4.106 1.00 22.27 C ATOM 201 N9 DG A 10 15.350 51.766 -3.574 1.00 21.11 N ATOM 202 C8 DG A 10 14.896 53.081 -3.798 1.00 23.85 C ATOM 203 N7 DG A 10 13.828 53.391 -3.129 1.00 20.77 N ATOM 204 C5 DG A 10 13.546 52.238 -2.388 1.00 22.73 C ATOM 205 C6 DG A 10 12.507 51.958 -1.479 1.00 24.89 C ATOM 206 O6 DG A 10 11.578 52.717 -1.110 1.00 26.77 O ATOM 207 N1 DG A 10 12.596 50.666 -0.968 1.00 22.40 N ATOM 208 C2 DG A 10 13.558 49.749 -1.303 1.00 24.07 C ATOM 209 N2 DG A 10 13.449 48.547 -0.686 1.00 21.20 N ATOM 210 N3 DG A 10 14.512 50.004 -2.182 1.00 20.93 N ATOM 211 C4 DG A 10 14.469 51.251 -2.668 1.00 22.12 C TER 212 DG A 10 HETATM 213 CO CO A 300 13.109 55.444 -3.188 0.50 23.46 CO HETATM 214 O HOH A 301 18.569 47.632 26.857 1.00 42.51 O HETATM 215 O HOH A 302 25.937 43.546 17.123 1.00 43.78 O HETATM 216 O HOH A 303 17.802 48.277 33.098 1.00 37.78 O HETATM 217 O HOH A 304 16.422 40.721 15.758 1.00 29.06 O HETATM 218 O HOH A 305 23.530 36.752 12.600 1.00 36.34 O HETATM 219 O HOH A 306 24.147 47.307 15.703 1.00 36.97 O HETATM 220 O HOH A 307 18.685 55.256 2.951 1.00 35.91 O HETATM 221 O HOH A 308 32.946 39.349 22.858 1.00 53.07 O HETATM 222 O HOH A 309 25.112 40.782 13.862 1.00 42.02 O HETATM 223 O HOH A 310 13.382 34.978 12.007 1.00 47.82 O HETATM 224 O HOH A 311 11.865 41.370 14.418 1.00 39.85 O HETATM 225 O HOH A 312 25.508 44.476 27.943 1.00 45.97 O HETATM 226 O HOH A 313 14.740 57.111 2.214 1.00 56.42 O HETATM 227 O HOH A 314 18.488 38.140 20.981 1.00 30.13 O HETATM 228 O HOH A 315 28.114 51.108 31.244 1.00 57.86 O HETATM 229 O HOH A 316 35.701 40.132 21.603 1.00 42.83 O HETATM 230 O HOH A 317 19.191 37.779 18.346 1.00 34.26 O HETATM 231 O HOH A 318 23.170 46.310 27.604 1.00 31.23 O HETATM 232 O HOH A 319 16.599 48.476 28.634 1.00 47.32 O HETATM 233 O HOH A 320 31.086 47.679 23.507 1.00 45.93 O HETATM 234 O HOH A 321 19.035 32.121 15.073 0.50 36.56 O HETATM 235 O HOH A 322 15.378 44.359 13.084 0.50 25.28 O HETATM 236 O HOH A 323 13.110 55.449 -7.557 0.50 31.44 O HETATM 237 O HOH A 324 11.654 55.181 -1.873 1.00 38.21 O HETATM 238 O HOH A 325 14.236 55.978 -4.676 1.00 34.00 O HETATM 239 O AHOH A 326 15.513 58.464 -4.254 0.50 26.33 O HETATM 240 O BHOH A 326 17.230 58.848 -3.028 0.50 31.71 O HETATM 241 O HOH A 327 16.669 54.874 -6.214 1.00 38.16 O HETATM 242 O HOH A 328 28.500 34.376 17.994 1.00 38.63 O HETATM 243 O HOH A 329 14.374 42.175 14.343 1.00 34.38 O HETATM 244 O HOH A 330 27.577 47.349 32.341 0.50 40.24 O HETATM 245 O HOH A 331 27.279 47.705 22.307 1.00 49.94 O HETATM 246 O HOH A 332 27.086 39.336 15.345 1.00 46.73 O HETATM 247 O HOH A 333 30.090 48.618 29.819 1.00 56.18 O HETATM 248 O HOH A 334 13.110 55.449 1.830 0.50 47.32 O HETATM 249 O HOH A 335 25.506 43.399 14.075 1.00 35.47 O HETATM 250 O HOH A 336 9.555 41.127 9.142 1.00 56.65 O HETATM 251 O HOH A 337 18.060 50.740 33.368 0.50 32.41 O HETATM 252 O HOH A 338 18.354 37.079 9.551 1.00 40.37 O HETATM 253 O HOH A 339 32.369 41.957 19.746 1.00 52.17 O HETATM 254 O HOH A 340 15.917 36.932 8.316 1.00 44.59 O HETATM 255 O HOH A 341 20.501 33.356 11.475 0.50 38.24 O HETATM 256 O HOH A 342 13.664 33.421 17.490 0.50 39.16 O HETATM 257 O HOH A 343 22.762 30.970 14.865 1.00 47.58 O HETATM 258 O HOH A 344 14.432 39.827 7.021 0.50 36.40 O HETATM 259 O HOH A 345 24.940 46.116 17.911 1.00 44.88 O HETATM 260 O HOH A 346 29.064 43.846 12.216 0.50 37.48 O CONECT 203 213 CONECT 213 203 237 238 CONECT 237 213 CONECT 238 213 MASTER 314 0 1 0 0 0 1 6 249 1 4 1 END
