465D
HEADER DNA 14-APR-99 465D TITLE STRUCTURE OF THE TOPOISOMERASE II POISON BOUND TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS TOPOISOMERASE II POISON, HEXANUCLEOTIDE, D(CGTACG)2, 9-AMINO-DACA, KEYWDS 2 DNA EXPDTA X-RAY DIFFRACTION AUTHOR A.ADAMS,J.M.GUSS,C.A.COLLYER,W.A.DENNY,L.P.WAKELIN REVDAT 5 27-DEC-23 465D 1 REMARK REVDAT 4 14-FEB-18 465D 1 REMARK REVDAT 3 24-FEB-09 465D 1 VERSN REVDAT 2 07-SEP-99 465D 3 HETATM REVDAT 1 25-AUG-99 465D 0 JRNL AUTH A.ADAMS,J.M.GUSS,C.A.COLLYER,W.A.DENNY,L.P.WAKELIN JRNL TITL CRYSTAL STRUCTURE OF THE TOPOISOMERASE II POISON JRNL TITL 2 9-AMINO-[N-(2-DIMETHYLAMINO)ETHYL]ACRIDINE-4-CARBOXAMIDE JRNL TITL 3 BOUND TO THE DNA HEXANUCLEOTIDE D(CGTACG)2. JRNL REF BIOCHEMISTRY V. 38 9221 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 10413496 JRNL DOI 10.1021/BI990352M REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.196 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.195 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 8.300 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 225 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 2705 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.195 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.192 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 8.200 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 219 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 2664 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 120 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 182.50 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 1 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 791 REMARK 3 NUMBER OF RESTRAINTS : 999 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 ANGLE DISTANCES (A) : 0.021 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.038 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.023 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: MOEWS & KRETSINGER,J.MOL.BIOL.91(1973)201-228 REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : NULL REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 465D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000001347. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-97 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2763 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 24.70 REMARK 200 R MERGE (I) : 0.02900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 56.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.14200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: ISOMORPHOUS REPLACEMENT REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: DDF073 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 MM DNA, 20 MM SODIUM CACODYLATE REMARK 280 BUFFER, PH 6.5, 4 MM MAGNESIUM ACETATE, 1 MM COBALT(II) CHLORIDE, REMARK 280 0.33 MM SPERMINE.4HCL, 1 MM 9-AMINO-[N-(2- DIMETHYLAMINO)ETHYL] REMARK 280 ACRIDINE-4-CARBOXAMIDE AND 9% MPD EQUILIBRATED AGAINST 1 ML OF A REMARK 280 SOLUTION OF 45% MPD IN WATER, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 13.23067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.46133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.23067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.46133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 30.16100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A4025 LIES ON A SPECIAL POSITION. REMARK 375 HOH A4029 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC A1001 C4' DC A1001 C3' 0.080 REMARK 500 DC A1001 C2' DC A1001 C1' 0.064 REMARK 500 DC A1001 O4' DC A1001 C1' 0.121 REMARK 500 DG A1002 C4' DG A1002 C3' 0.092 REMARK 500 DG A1002 C2' DG A1002 C1' 0.082 REMARK 500 DG A1002 O4' DG A1002 C1' 0.101 REMARK 500 DG A1002 O3' DT A1003 P 0.073 REMARK 500 DT A1003 C5' DT A1003 C4' 0.052 REMARK 500 DT A1003 C4' DT A1003 C3' 0.088 REMARK 500 DT A1003 C2' DT A1003 C1' 0.091 REMARK 500 DT A1003 O4' DT A1003 C1' 0.123 REMARK 500 DA A1004 C4' DA A1004 C3' 0.067 REMARK 500 DA A1004 C2' DA A1004 C1' 0.068 REMARK 500 DA A1004 O4' DA A1004 C1' 0.120 REMARK 500 DC A1005 C4' DC A1005 C3' 0.086 REMARK 500 DC A1005 C2' DC A1005 C1' 0.085 REMARK 500 DC A1005 O4' DC A1005 C1' 0.071 REMARK 500 DG A1006 C5' DG A1006 C4' 0.048 REMARK 500 DG A1006 C4' DG A1006 C3' 0.090 REMARK 500 DG A1006 C2' DG A1006 C1' 0.079 REMARK 500 DG A1006 O4' DG A1006 C1' 0.092 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A1001 N1 - C1' - C2' ANGL. DEV. = 11.0 DEGREES REMARK 500 DG A1002 O5' - C5' - C4' ANGL. DEV. = -7.5 DEGREES REMARK 500 DG A1002 P - O5' - C5' ANGL. DEV. = -10.2 DEGREES REMARK 500 DG A1002 O4' - C1' - C2' ANGL. DEV. = -6.0 DEGREES REMARK 500 DG A1002 O4' - C1' - N9 ANGL. DEV. = -9.4 DEGREES REMARK 500 DG A1002 C6 - N1 - C2 ANGL. DEV. = -4.6 DEGREES REMARK 500 DG A1002 C5 - C6 - O6 ANGL. DEV. = -4.4 DEGREES REMARK 500 DT A1003 O5' - C5' - C4' ANGL. DEV. = -9.9 DEGREES REMARK 500 DT A1003 O4' - C1' - C2' ANGL. DEV. = -8.9 DEGREES REMARK 500 DT A1003 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 DA A1004 O5' - C5' - C4' ANGL. DEV. = -5.0 DEGREES REMARK 500 DA A1004 O4' - C1' - C2' ANGL. DEV. = -5.5 DEGREES REMARK 500 DA A1004 O4' - C1' - N9 ANGL. DEV. = -11.6 DEGREES REMARK 500 DC A1005 O4' - C1' - C2' ANGL. DEV. = -5.4 DEGREES REMARK 500 DC A1005 O4' - C1' - N1 ANGL. DEV. = 5.7 DEGREES REMARK 500 DC A1005 C6 - N1 - C2 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG A1006 O5' - C5' - C4' ANGL. DEV. = -8.3 DEGREES REMARK 500 DG A1006 P - O5' - C5' ANGL. DEV. = -10.9 DEGREES REMARK 500 DG A1006 O4' - C1' - C2' ANGL. DEV. = -4.9 DEGREES REMARK 500 DG A1006 O4' - C1' - N9 ANGL. DEV. = -8.1 DEGREES REMARK 500 DG A1006 N9 - C4 - C5 ANGL. DEV. = -2.4 DEGREES REMARK 500 DG A1006 C5 - C6 - O6 ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9AD A 3014 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9AD A 3015 DBREF 465D A 1001 1006 PDB 465D 465D 1001 1006 SEQRES 1 A 6 DC DG DT DA DC DG HET 9AD A3014 23 HET 9AD A3015 23 HETNAM 9AD 9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4- HETNAM 2 9AD CARBOXAMIDE FORMUL 2 9AD 2(C18 H20 N4 O) FORMUL 4 HOH *29(H2 O) SITE 1 AC1 8 DC A1001 DG A1002 DA A1004 DC A1005 SITE 2 AC1 8 DG A1006 9AD A3015 HOH A4010 HOH A4024 SITE 1 AC2 5 DC A1001 DG A1006 9AD A3014 HOH A4012 SITE 2 AC2 5 HOH A4015 CRYST1 30.161 30.161 39.692 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033155 0.019142 0.000000 0.00000 SCALE2 0.000000 0.038285 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025194 0.00000 ATOM 1 O5' DC A1001 20.307 10.604 27.303 1.00 17.39 O ATOM 2 C5' DC A1001 19.433 11.734 27.530 1.00 17.91 C ATOM 3 C4' DC A1001 18.610 11.911 26.243 1.00 14.48 C ATOM 4 O4' DC A1001 19.360 12.184 25.044 1.00 18.40 O ATOM 5 C3' DC A1001 17.747 10.593 25.916 1.00 22.63 C ATOM 6 O3' DC A1001 16.448 10.862 26.629 1.00 21.32 O ATOM 7 C2' DC A1001 17.430 10.861 24.382 1.00 23.78 C ATOM 8 C1' DC A1001 18.776 11.467 23.811 1.00 28.84 C ATOM 9 N1 DC A1001 19.828 10.722 23.250 1.00 20.16 N ATOM 10 C2 DC A1001 19.977 10.764 21.886 1.00 16.37 C ATOM 11 O2 DC A1001 19.142 11.467 21.254 1.00 22.63 O ATOM 12 N3 DC A1001 20.984 10.057 21.311 1.00 15.78 N ATOM 13 C4 DC A1001 21.810 9.338 22.090 1.00 17.94 C ATOM 14 N4 DC A1001 22.801 8.644 21.534 1.00 16.69 N ATOM 15 C5 DC A1001 21.661 9.296 23.513 1.00 15.57 C ATOM 16 C6 DC A1001 20.658 10.003 24.058 1.00 17.72 C ATOM 17 P DG A1002 15.566 9.494 26.969 1.00 23.54 P ATOM 18 OP1 DG A1002 14.449 9.929 27.940 1.00 25.00 O ATOM 19 OP2 DG A1002 16.467 8.388 27.421 1.00 21.73 O ATOM 20 O5' DG A1002 14.964 9.301 25.478 1.00 21.29 O ATOM 21 C5' DG A1002 13.960 8.234 25.460 1.00 22.69 C ATOM 22 C4' DG A1002 13.396 8.352 24.025 1.00 27.31 C ATOM 23 O4' DG A1002 14.355 7.887 23.048 1.00 28.59 O ATOM 24 C3' DG A1002 12.097 7.400 23.839 1.00 27.72 C ATOM 25 O3' DG A1002 11.419 8.081 22.690 1.00 26.23 O ATOM 26 C2' DG A1002 12.774 6.106 23.257 1.00 25.07 C ATOM 27 C1' DG A1002 13.912 6.655 22.273 1.00 30.93 C ATOM 28 N9 DG A1002 15.219 5.814 22.404 1.00 20.03 N ATOM 29 C8 DG A1002 15.934 5.386 23.474 1.00 19.52 C ATOM 30 N7 DG A1002 16.998 4.686 23.159 1.00 24.15 N ATOM 31 C5 DG A1002 16.979 4.651 21.764 1.00 19.37 C ATOM 32 C6 DG A1002 17.877 4.039 20.880 1.00 15.80 C ATOM 33 O6 DG A1002 18.868 3.410 21.230 1.00 18.90 O ATOM 34 N1 DG A1002 17.551 4.207 19.536 1.00 14.03 N ATOM 35 C2 DG A1002 16.418 4.928 19.169 1.00 20.23 C ATOM 36 N2 DG A1002 16.168 5.045 17.864 1.00 20.10 N ATOM 37 N3 DG A1002 15.545 5.521 20.001 1.00 19.21 N ATOM 38 C4 DG A1002 15.884 5.344 21.282 1.00 21.01 C ATOM 39 P DT A1003 9.878 7.534 22.306 1.00 29.49 P ATOM 40 OP1 DT A1003 9.088 8.735 21.864 1.00 35.24 O ATOM 41 OP2 DT A1003 9.450 6.608 23.396 1.00 31.56 O ATOM 42 O5' DT A1003 10.330 6.644 21.016 1.00 25.64 O ATOM 43 C5' DT A1003 10.712 7.335 19.784 1.00 19.30 C ATOM 44 C4' DT A1003 10.734 6.118 18.802 1.00 23.10 C ATOM 45 O4' DT A1003 11.869 5.284 19.101 1.00 30.15 O ATOM 46 C3' DT A1003 9.445 5.191 19.110 1.00 27.39 C ATOM 47 O3' DT A1003 9.156 4.550 17.795 1.00 37.81 O ATOM 48 C2' DT A1003 10.066 4.032 19.974 1.00 22.17 C ATOM 49 C1' DT A1003 11.490 3.797 19.260 1.00 30.74 C ATOM 50 N1 DT A1003 12.531 3.176 19.933 1.00 27.82 N ATOM 51 C2 DT A1003 13.598 2.671 19.175 1.00 23.95 C ATOM 52 O2 DT A1003 13.628 2.764 17.936 1.00 21.09 O ATOM 53 N3 DT A1003 14.573 2.081 19.927 1.00 24.08 N ATOM 54 C4 DT A1003 14.630 1.933 21.283 1.00 17.82 C ATOM 55 O4 DT A1003 15.571 1.379 21.828 1.00 28.00 O ATOM 56 C5 DT A1003 13.490 2.483 21.977 1.00 29.96 C ATOM 57 C7 DT A1003 13.423 2.389 23.487 1.00 33.69 C ATOM 58 C6 DT A1003 12.501 3.077 21.286 1.00 21.52 C ATOM 59 P DA A1004 7.712 4.547 16.984 1.00 36.53 P ATOM 60 OP1 DA A1004 7.281 5.953 16.685 1.00 58.20 O ATOM 61 OP2 DA A1004 6.781 3.568 17.677 1.00 35.45 O ATOM 62 O5' DA A1004 8.253 3.858 15.607 1.00 27.64 O ATOM 63 C5' DA A1004 9.262 4.491 14.782 1.00 26.51 C ATOM 64 C4' DA A1004 9.920 3.322 14.017 1.00 25.90 C ATOM 65 O4' DA A1004 10.777 2.520 14.849 1.00 22.30 O ATOM 66 C3' DA A1004 8.830 2.336 13.395 1.00 20.57 C ATOM 67 O3' DA A1004 9.437 1.928 12.077 1.00 16.79 O ATOM 68 C2' DA A1004 8.935 1.073 14.318 1.00 18.42 C ATOM 69 C1' DA A1004 10.443 1.017 14.809 1.00 18.03 C ATOM 70 N9 DA A1004 10.567 0.773 16.332 1.00 15.96 N ATOM 71 C8 DA A1004 9.706 1.066 17.368 1.00 19.25 C ATOM 72 N7 DA A1004 10.207 0.678 18.554 1.00 18.78 N ATOM 73 C5 DA A1004 11.433 0.118 18.249 1.00 16.04 C ATOM 74 C6 DA A1004 12.466 -0.476 19.026 1.00 18.01 C ATOM 75 N6 DA A1004 12.336 -0.573 20.362 1.00 20.51 N ATOM 76 N1 DA A1004 13.562 -0.931 18.408 1.00 17.18 N ATOM 77 C2 DA A1004 13.645 -0.813 17.084 1.00 14.27 C ATOM 78 N3 DA A1004 12.774 -0.289 16.227 1.00 16.09 N ATOM 79 C4 DA A1004 11.675 0.168 16.886 1.00 22.49 C ATOM 80 P DC A1005 8.628 0.802 11.181 1.00 19.65 P ATOM 81 OP1 DC A1005 9.015 1.021 9.731 1.00 20.21 O ATOM 82 OP2 DC A1005 7.181 0.760 11.637 1.00 22.76 O ATOM 83 O5' DC A1005 9.323 -0.572 11.694 1.00 18.59 O ATOM 84 C5' DC A1005 10.720 -0.803 11.351 1.00 17.77 C ATOM 85 C4' DC A1005 11.076 -2.152 12.010 1.00 17.27 C ATOM 86 O4' DC A1005 11.070 -2.070 13.465 1.00 17.42 O ATOM 87 C3' DC A1005 9.955 -3.250 11.628 1.00 18.18 C ATOM 88 O3' DC A1005 10.748 -4.476 11.395 1.00 17.17 O ATOM 89 C2' DC A1005 9.242 -3.524 13.000 1.00 17.25 C ATOM 90 C1' DC A1005 10.376 -3.229 14.096 1.00 17.59 C ATOM 91 N1 DC A1005 10.047 -3.033 15.431 1.00 16.99 N ATOM 92 C2 DC A1005 10.977 -3.433 16.377 1.00 17.87 C ATOM 93 O2 DC A1005 12.076 -3.947 16.011 1.00 16.46 O ATOM 94 N3 DC A1005 10.695 -3.270 17.710 1.00 18.01 N ATOM 95 C4 DC A1005 9.508 -2.711 18.041 1.00 16.97 C ATOM 96 N4 DC A1005 9.249 -2.553 19.331 1.00 15.73 N ATOM 97 C5 DC A1005 8.542 -2.300 17.068 1.00 16.51 C ATOM 98 C6 DC A1005 8.841 -2.470 15.763 1.00 17.19 C ATOM 99 P DG A1006 10.169 -5.530 10.236 1.00 21.00 P ATOM 100 OP1 DG A1006 10.766 -5.169 8.864 1.00 24.37 O ATOM 101 OP2 DG A1006 8.695 -5.528 10.354 1.00 18.37 O ATOM 102 O5' DG A1006 10.925 -6.839 10.749 1.00 20.21 O ATOM 103 C5' DG A1006 10.504 -7.157 12.089 1.00 20.02 C ATOM 104 C4' DG A1006 10.982 -8.637 12.210 1.00 28.62 C ATOM 105 O4' DG A1006 10.562 -9.100 13.522 1.00 21.06 O ATOM 106 C3' DG A1006 10.152 -9.517 11.134 1.00 22.23 C ATOM 107 O3' DG A1006 10.966 -10.754 11.017 1.00 24.76 O ATOM 108 C2' DG A1006 8.913 -9.949 11.998 1.00 22.90 C ATOM 109 C1' DG A1006 9.540 -10.211 13.444 1.00 27.02 C ATOM 110 N9 DG A1006 8.546 -9.737 14.543 1.00 18.50 N ATOM 111 C8 DG A1006 7.329 -9.132 14.462 1.00 22.94 C ATOM 112 N7 DG A1006 6.826 -8.903 15.664 1.00 22.32 N ATOM 113 C5 DG A1006 7.767 -9.386 16.527 1.00 17.96 C ATOM 114 C6 DG A1006 7.808 -9.431 17.951 1.00 16.51 C ATOM 115 O6 DG A1006 6.895 -8.991 18.681 1.00 19.41 O ATOM 116 N1 DG A1006 8.963 -10.011 18.442 1.00 16.81 N ATOM 117 C2 DG A1006 10.004 -10.518 17.705 1.00 13.00 C ATOM 118 N2 DG A1006 11.031 -11.040 18.410 1.00 15.17 N ATOM 119 N3 DG A1006 9.973 -10.478 16.380 1.00 14.58 N ATOM 120 C4 DG A1006 8.863 -9.917 15.872 1.00 18.42 C TER 121 DG A1006 HETATM 122 C1 9AD A3014 17.443 8.276 20.142 1.00 19.40 C HETATM 123 C2 9AD A3014 17.407 8.246 21.529 1.00 19.63 C HETATM 124 C3 9AD A3014 18.402 7.593 22.199 1.00 20.88 C HETATM 125 C4 9AD A3014 19.465 6.920 21.566 1.00 21.90 C HETATM 126 C5 9AD A3014 21.757 5.869 17.549 1.00 20.15 C HETATM 127 C6 9AD A3014 21.874 5.924 16.158 1.00 17.74 C HETATM 128 C7 9AD A3014 20.928 6.600 15.392 1.00 19.72 C HETATM 129 C8 9AD A3014 19.735 7.002 15.963 1.00 20.86 C HETATM 130 C9 9AD A3014 18.514 7.617 18.021 1.00 22.06 C HETATM 131 N10 9AD A3014 20.524 6.351 19.498 1.00 20.30 N HETATM 132 C11 9AD A3014 18.469 7.615 19.443 1.00 18.97 C HETATM 133 C12 9AD A3014 19.596 7.033 20.150 1.00 22.66 C HETATM 134 C13 9AD A3014 19.605 6.996 17.378 1.00 22.14 C HETATM 135 C14 9AD A3014 20.632 6.392 18.183 1.00 23.34 C HETATM 136 N9 9AD A3014 17.479 8.129 17.322 1.00 22.22 N HETATM 137 CD1 9AD A3014 20.419 6.101 22.461 1.00 27.00 C HETATM 138 OD1 9AD A3014 21.445 5.664 21.945 1.00 27.80 O HETATM 139 ND1 9AD A3014 20.057 5.969 23.762 1.00 36.98 N HETATM 140 ND2 9AD A3014 19.440 3.184 24.231 1.00 61.88 N HETATM 141 CD2 9AD A3014 20.830 5.218 24.764 1.00 43.09 C HETATM 142 CD3 9AD A3014 20.833 3.711 24.438 1.00 50.22 C HETATM 143 CD7 9AD A3014 19.468 1.759 23.802 1.00 38.09 C HETATM 144 CD8 9AD A3014 18.545 3.434 25.400 1.00 56.88 C HETATM 145 C1 A9AD A3015 8.816 -13.683 17.339 0.50 11.98 C HETATM 146 C2 A9AD A3015 8.100 -13.269 16.238 0.50 16.71 C HETATM 147 C3 A9AD A3015 6.867 -12.659 16.354 0.50 20.34 C HETATM 148 C4 A9AD A3015 6.238 -12.456 17.598 0.50 23.89 C HETATM 149 C5 A9AD A3015 6.521 -12.464 22.253 0.50 10.95 C HETATM 150 C6 A9AD A3015 7.046 -12.934 23.454 0.50 23.55 C HETATM 151 C7 A9AD A3015 8.361 -13.405 23.492 0.50 15.06 C HETATM 152 C8 A9AD A3015 8.973 -13.826 22.317 0.50 15.21 C HETATM 153 C9 A9AD A3015 8.970 -13.887 19.822 0.50 12.49 C HETATM 154 N10A9AD A3015 6.464 -12.668 19.947 0.50 16.90 N HETATM 155 C11A9AD A3015 8.281 -13.508 18.633 0.50 14.54 C HETATM 156 C12A9AD A3015 7.038 -12.764 18.755 0.50 20.45 C HETATM 157 C13A9AD A3015 8.388 -13.544 21.069 0.50 16.88 C HETATM 158 C14A9AD A3015 7.115 -12.877 21.059 0.50 13.19 C HETATM 159 N9 A9AD A3015 10.206 -14.443 19.824 0.50 15.05 N HETATM 160 CD1A9AD A3015 4.912 -11.658 17.688 0.50 30.44 C HETATM 161 OD1A9AD A3015 4.276 -11.581 18.751 0.50 26.21 O HETATM 162 ND1A9AD A3015 4.414 -10.969 16.633 0.50 35.92 N HETATM 163 ND2A9AD A3015 4.236 -8.150 15.767 0.50 24.34 N HETATM 164 CD2A9AD A3015 3.120 -10.266 16.690 0.50 33.06 C HETATM 165 CD3A9AD A3015 3.280 -8.735 16.769 0.50 23.25 C HETATM 166 CD7A9AD A3015 3.597 -8.088 14.415 0.50 25.86 C HETATM 167 CD8A9AD A3015 4.743 -6.806 16.173 0.50 35.01 C HETATM 168 O HOH A4001 11.933 9.823 28.426 1.00 23.95 O HETATM 169 O HOH A4002 16.346 11.697 21.100 1.00 23.11 O HETATM 170 O HOH A4003 14.423 9.902 20.900 1.00 31.87 O HETATM 171 O HOH A4004 17.427 8.911 29.958 1.00 29.77 O HETATM 172 O HOH A4005 12.325 -12.671 12.883 1.00 26.42 O HETATM 173 O HOH A4006 9.962 11.029 21.897 1.00 41.78 O HETATM 174 O HOH A4007 19.953 9.011 29.474 1.00 31.81 O HETATM 175 O HOH A4008 9.520 0.502 21.126 1.00 34.63 O HETATM 176 O HOH A4009 6.944 -3.587 9.566 1.00 34.69 O HETATM 177 O HOH A4010 24.305 5.054 21.448 1.00 31.71 O HETATM 178 O HOH A4011 7.158 -6.540 12.266 1.00 35.07 O HETATM 179 O HOH A4012 5.596 -5.409 13.542 1.00 42.65 O HETATM 180 O HOH A4013 10.148 -14.224 13.564 1.00 34.07 O HETATM 181 O HOH A4014 6.879 -1.428 20.172 1.00 32.57 O HETATM 182 O HOH A4015 11.877 -15.217 21.573 1.00 27.22 O HETATM 183 O HOH A4016 8.651 -1.035 7.963 1.00 22.30 O HETATM 184 O HOH A4017 6.321 1.017 17.074 1.00 50.20 O HETATM 185 O HOH A4018 16.461 8.420 31.985 1.00 31.17 O HETATM 186 O HOH A4019 14.130 4.675 26.332 1.00 31.36 O HETATM 187 O HOH A4020 14.718 6.888 28.147 1.00 39.58 O HETATM 188 O HOH A4021 22.838 11.671 26.897 1.00 14.72 O HETATM 189 O HOH A4022 11.931 10.748 20.237 1.00 43.23 O HETATM 190 O HOH A4023 11.122 10.446 17.947 1.00 43.97 O HETATM 191 O HOH A4024 18.422 7.279 25.706 1.00 28.17 O HETATM 192 O HOH A4025 7.540 -13.060 12.454 0.50 31.63 O HETATM 193 O HOH A4026 16.394 12.296 18.040 1.00 45.97 O HETATM 194 O HOH A4027 6.170 -0.972 13.627 1.00 52.79 O HETATM 195 O HOH A4028 26.934 4.133 20.691 1.00 56.74 O HETATM 196 O HOH A4029 7.540 -13.060 10.201 0.50 57.41 O CONECT 122 123 132 CONECT 123 122 124 CONECT 124 123 125 CONECT 125 124 133 137 CONECT 126 127 135 CONECT 127 126 128 CONECT 128 127 129 CONECT 129 128 134 CONECT 130 132 134 136 CONECT 131 133 135 CONECT 132 122 130 133 CONECT 133 125 131 132 CONECT 134 129 130 135 CONECT 135 126 131 134 CONECT 136 130 CONECT 137 125 138 139 CONECT 138 137 CONECT 139 137 141 CONECT 140 142 143 144 CONECT 141 139 142 CONECT 142 140 141 CONECT 143 140 CONECT 144 140 CONECT 145 146 155 CONECT 146 145 147 CONECT 147 146 148 CONECT 148 147 156 160 CONECT 149 150 158 CONECT 150 149 151 CONECT 151 150 152 CONECT 152 151 157 CONECT 153 155 157 159 CONECT 154 156 158 CONECT 155 145 153 156 CONECT 156 148 154 155 CONECT 157 152 153 158 CONECT 158 149 154 157 CONECT 159 153 CONECT 160 148 161 162 CONECT 161 160 CONECT 162 160 164 CONECT 163 165 166 167 CONECT 164 162 165 CONECT 165 163 164 CONECT 166 163 CONECT 167 163 MASTER 287 0 2 0 0 0 4 6 195 1 46 1 END
