7YQ2
HEADER PHOTOSYNTHESIS,ELECTRON TRANSPORT 05-AUG-22 7YQ2 TITLE CRYSTAL STRUCTURE OF PHOTOSYSTEM II EXPRESSING PSBA2 GENE ONLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTOSYSTEM II PROTEIN D1 2; COMPND 3 CHAIN: A, a; COMPND 4 SYNONYM: PSII D1 PROTEIN 2,PHOTOSYSTEM II Q(B) PROTEIN 2; COMPND 5 EC: 1.10.3.9; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PHOTOSYSTEM II CP47 REACTION CENTER PROTEIN; COMPND 8 CHAIN: B, b; COMPND 9 SYNONYM: PSII 47 KDA PROTEIN,PROTEIN CP-47; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN; COMPND 12 CHAIN: C, c; COMPND 13 SYNONYM: PSII 43 KDA PROTEIN,PROTEIN CP-43; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: PHOTOSYSTEM II D2 PROTEIN; COMPND 16 CHAIN: D, d; COMPND 17 SYNONYM: PSII D2 PROTEIN,PHOTOSYSTEM II Q(A) PROTEIN; COMPND 18 EC: 1.10.3.9; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: CYTOCHROME B559 SUBUNIT ALPHA; COMPND 21 CHAIN: E, e; COMPND 22 SYNONYM: PSII REACTION CENTER SUBUNIT V; COMPND 23 MOL_ID: 6; COMPND 24 MOLECULE: CYTOCHROME B559 SUBUNIT BETA; COMPND 25 CHAIN: F, f; COMPND 26 SYNONYM: PSII REACTION CENTER SUBUNIT VI; COMPND 27 MOL_ID: 7; COMPND 28 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN H; COMPND 29 CHAIN: H, h; COMPND 30 SYNONYM: PSII-H; COMPND 31 MOL_ID: 8; COMPND 32 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN I; COMPND 33 CHAIN: I, i; COMPND 34 SYNONYM: PSII-I,PSII 4.4 KDA PROTEIN; COMPND 35 MOL_ID: 9; COMPND 36 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN J; COMPND 37 CHAIN: J, j; COMPND 38 SYNONYM: PSII-J; COMPND 39 MOL_ID: 10; COMPND 40 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN K; COMPND 41 CHAIN: K, k; COMPND 42 SYNONYM: PSII-K; COMPND 43 MOL_ID: 11; COMPND 44 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN L; COMPND 45 CHAIN: L, l; COMPND 46 SYNONYM: PSII-L; COMPND 47 MOL_ID: 12; COMPND 48 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN M; COMPND 49 CHAIN: M, m; COMPND 50 SYNONYM: PSII-M; COMPND 51 MOL_ID: 13; COMPND 52 MOLECULE: PHOTOSYSTEM II MANGANESE-STABILIZING POLYPEPTIDE; COMPND 53 CHAIN: O, o; COMPND 54 SYNONYM: MSP; COMPND 55 MOL_ID: 14; COMPND 56 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN T; COMPND 57 CHAIN: T, t; COMPND 58 SYNONYM: PSII-T,PSII-TC; COMPND 59 MOL_ID: 15; COMPND 60 MOLECULE: PHOTOSYSTEM II 12 KDA EXTRINSIC PROTEIN; COMPND 61 CHAIN: U, u; COMPND 62 SYNONYM: PS II COMPLEX 12 KDA EXTRINSIC PROTEIN,PSII-U; COMPND 63 MOL_ID: 16; COMPND 64 MOLECULE: CYTOCHROME C-550; COMPND 65 CHAIN: V, v; COMPND 66 SYNONYM: CYTOCHROME C-549,CYTOCHROME C550,LOW-POTENTIAL CYTOCHROME C; COMPND 67 MOL_ID: 17; COMPND 68 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN YCF12; COMPND 69 CHAIN: Y, y; COMPND 70 MOL_ID: 18; COMPND 71 MOLECULE: PHOTOSYSTEM II REACTION CENTER X PROTEIN; COMPND 72 CHAIN: X, x; COMPND 73 MOL_ID: 19; COMPND 74 MOLECULE: PHOTOSYSTEM II REACTION CENTER PROTEIN Z; COMPND 75 CHAIN: Z, z; COMPND 76 SYNONYM: PSII-Z; COMPND 77 MOL_ID: 20; COMPND 78 MOLECULE: PHOTOSYSTEM II PROTEIN Y; COMPND 79 CHAIN: R SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 3 ORGANISM_TAXID: 197221; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 6 ORGANISM_TAXID: 197221; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 9 ORGANISM_TAXID: 197221; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 12 ORGANISM_TAXID: 197221; SOURCE 13 MOL_ID: 5; SOURCE 14 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 15 ORGANISM_TAXID: 197221; SOURCE 16 MOL_ID: 6; SOURCE 17 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 18 ORGANISM_TAXID: 197221; SOURCE 19 MOL_ID: 7; SOURCE 20 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 21 ORGANISM_TAXID: 197221; SOURCE 22 MOL_ID: 8; SOURCE 23 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 24 ORGANISM_TAXID: 197221; SOURCE 25 MOL_ID: 9; SOURCE 26 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 27 ORGANISM_TAXID: 197221; SOURCE 28 MOL_ID: 10; SOURCE 29 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 30 ORGANISM_TAXID: 197221; SOURCE 31 MOL_ID: 11; SOURCE 32 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 33 ORGANISM_TAXID: 197221; SOURCE 34 MOL_ID: 12; SOURCE 35 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 36 ORGANISM_TAXID: 197221; SOURCE 37 MOL_ID: 13; SOURCE 38 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 39 ORGANISM_TAXID: 197221; SOURCE 40 MOL_ID: 14; SOURCE 41 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 42 ORGANISM_TAXID: 197221; SOURCE 43 MOL_ID: 15; SOURCE 44 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 45 ORGANISM_TAXID: 197221; SOURCE 46 MOL_ID: 16; SOURCE 47 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 48 ORGANISM_TAXID: 197221; SOURCE 49 MOL_ID: 17; SOURCE 50 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 51 ORGANISM_TAXID: 197221; SOURCE 52 MOL_ID: 18; SOURCE 53 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 54 ORGANISM_TAXID: 197221; SOURCE 55 MOL_ID: 19; SOURCE 56 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 57 ORGANISM_TAXID: 197221; SOURCE 58 MOL_ID: 20; SOURCE 59 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS VESTITUS BP-1; SOURCE 60 ORGANISM_TAXID: 197221 KEYWDS PHOTOSYNTHESIS, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Y.NAKAJIMA,M.SUGA,J.R.SHEN REVDAT 2 07-DEC-22 7YQ2 1 JRNL REVDAT 1 30-NOV-22 7YQ2 0 JRNL AUTH Y.NAKAJIMA,N.UGAI-AMO,N.TONE,A.NAKAGAWA,M.IWAI,M.IKEUCHI, JRNL AUTH 2 M.SUGIURA,M.SUGA,J.R.SHEN JRNL TITL CRYSTAL STRUCTURES OF PHOTOSYSTEM II FROM A CYANOBACTERIUM JRNL TITL 2 EXPRESSING PSBA 2 IN COMPARISON TO PSBA 3 REVEAL DIFFERENCES JRNL TITL 3 IN THE D1 SUBUNIT. JRNL REF J.BIOL.CHEM. V. 298 02668 2022 JRNL REFN ESSN 1083-351X JRNL PMID 36334624 JRNL DOI 10.1016/J.JBC.2022.102668 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 621333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 31121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.8600 - 4.6700 1.00 20073 1042 0.1319 0.1606 REMARK 3 2 4.6700 - 4.0800 1.00 19858 1052 0.1217 0.1474 REMARK 3 3 4.0800 - 3.7100 1.00 19844 1055 0.1257 0.1596 REMARK 3 4 3.7100 - 3.4500 1.00 19837 1036 0.1291 0.1605 REMARK 3 5 3.4500 - 3.2500 1.00 19775 1047 0.1295 0.1635 REMARK 3 6 3.2500 - 3.0800 1.00 19672 1094 0.1361 0.1650 REMARK 3 7 3.0800 - 2.9500 1.00 19807 1026 0.1383 0.1898 REMARK 3 8 2.9500 - 2.8400 1.00 19667 1049 0.1388 0.1771 REMARK 3 9 2.8400 - 2.7400 1.00 19745 1004 0.1381 0.1838 REMARK 3 10 2.7400 - 2.6500 1.00 19634 1064 0.1396 0.1876 REMARK 3 11 2.6500 - 2.5800 1.00 19695 1030 0.1434 0.1842 REMARK 3 12 2.5800 - 2.5100 1.00 19591 1080 0.1446 0.1843 REMARK 3 13 2.5100 - 2.4500 1.00 19625 1044 0.1461 0.1864 REMARK 3 14 2.4500 - 2.3900 1.00 19665 976 0.1552 0.1931 REMARK 3 15 2.3900 - 2.3400 1.00 19649 1021 0.1532 0.1999 REMARK 3 16 2.3400 - 2.3000 1.00 19568 1072 0.1614 0.2044 REMARK 3 17 2.3000 - 2.2500 1.00 19654 1018 0.1730 0.2150 REMARK 3 18 2.2500 - 2.2100 1.00 19592 987 0.1850 0.2311 REMARK 3 19 2.2100 - 2.1700 1.00 19630 996 0.1837 0.2236 REMARK 3 20 2.1700 - 2.1400 1.00 19543 1035 0.1879 0.2314 REMARK 3 21 2.1400 - 2.1100 1.00 19585 984 0.2003 0.2438 REMARK 3 22 2.1100 - 2.0800 1.00 19611 1032 0.2092 0.2617 REMARK 3 23 2.0800 - 2.0500 1.00 19626 1028 0.2121 0.2473 REMARK 3 24 2.0500 - 2.0200 1.00 19524 1044 0.2252 0.2546 REMARK 3 25 2.0200 - 1.9900 1.00 19503 1056 0.2473 0.2889 REMARK 3 26 1.9900 - 1.9700 1.00 19484 1073 0.2566 0.2861 REMARK 3 27 1.9700 - 1.9400 1.00 19521 1051 0.2677 0.2964 REMARK 3 28 1.9400 - 1.9200 1.00 19576 1015 0.2783 0.2998 REMARK 3 29 1.9200 - 1.9000 0.98 19290 996 0.3046 0.3262 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -13.1690 -13.3638 25.7906 REMARK 3 T TENSOR REMARK 3 T11: 0.2693 T22: 0.2143 REMARK 3 T33: 0.1714 T12: 0.0369 REMARK 3 T13: -0.0141 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 0.1290 L22: 0.2863 REMARK 3 L33: 0.3816 L12: 0.0510 REMARK 3 L13: -0.0081 L23: -0.1232 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.0165 S13: -0.0075 REMARK 3 S21: 0.0042 S22: 0.0397 S23: 0.0156 REMARK 3 S31: -0.0418 S32: 0.0005 S33: -0.0371 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 19 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 11 THROUGH 24 OR REMARK 3 RESID 26 THROUGH 67 OR RESID 69 THROUGH REMARK 3 220 OR RESID 222 THROUGH 228 OR (RESID REMARK 3 229 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 230 THROUGH REMARK 3 261 OR (RESID 262 THROUGH 263 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 264 THROUGH 269 OR RESID 271 REMARK 3 THROUGH 344 OR RESID 410 OR RESID 420 REMARK 3 THROUGH 421)) REMARK 3 SELECTION : (CHAIN A AND ((RESID 11 AND (NAME CA OR REMARK 3 NAME C OR NAME O )) OR RESID 12 OR (RESID REMARK 3 13 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 14 OR REMARK 3 (RESID 15 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 16 REMARK 3 THROUGH 24 OR RESID 26 THROUGH 67 OR REMARK 3 RESID 69 THROUGH 220 OR RESID 222 THROUGH REMARK 3 237 OR (RESID 238 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 239 THROUGH 241 OR (RESID 242 REMARK 3 THROUGH 243 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 244 THROUGH 269 OR RESID 271 THROUGH 344 REMARK 3 OR RESID 410 OR RESID 421 THROUGH 422)) REMARK 3 ATOM PAIRS NUMBER : 3073 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN B AND (RESID 2 THROUGH 35 OR RESID REMARK 3 37 THROUGH 75 OR RESID 77 THROUGH 120 OR REMARK 3 RESID 122 THROUGH 126 OR (RESID 127 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 128 THROUGH 147 OR REMARK 3 RESID 149 THROUGH 222 OR RESID 224 REMARK 3 THROUGH 238 OR RESID 240 THROUGH 284 OR REMARK 3 RESID 286 THROUGH 306 OR RESID 308 REMARK 3 THROUGH 346 OR RESID 348 OR (RESID 349 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG )) OR RESID 350 REMARK 3 THROUGH 351 OR RESID 353 THROUGH 418 OR REMARK 3 RESID 420 THROUGH 434 OR RESID 436 REMARK 3 THROUGH 478 OR (RESID 479 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 480 THROUGH 483 OR (RESID 484 REMARK 3 THROUGH 487 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 488 THROUGH 494 OR (RESID 495 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 496 OR (RESID 497 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 498 THROUGH 504 OR (RESID 505 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 603 THROUGH 617 REMARK 3 OR RESID 619 THROUGH 620 OR RESID 622 REMARK 3 THROUGH 623 OR RESID 625 THROUGH 626 OR REMARK 3 RESID 628 THROUGH 629 OR RESID 633 OR REMARK 3 RESID 1301)) REMARK 3 SELECTION : (CHAIN B AND (RESID 2 THROUGH 35 OR RESID REMARK 3 37 THROUGH 75 OR RESID 77 THROUGH 120 OR REMARK 3 RESID 122 THROUGH 147 OR RESID 149 REMARK 3 THROUGH 222 OR RESID 224 THROUGH 226 OR REMARK 3 (RESID 227 THROUGH 228 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 229 THROUGH 238 OR RESID 240 REMARK 3 THROUGH 284 OR RESID 286 THROUGH 306 OR REMARK 3 RESID 308 THROUGH 346 OR RESID 348 REMARK 3 THROUGH 351 OR RESID 353 THROUGH 418 OR REMARK 3 RESID 420 THROUGH 434 OR RESID 436 REMARK 3 THROUGH 505 OR RESID 604 THROUGH 618 OR REMARK 3 RESID 620 THROUGH 621 OR RESID 623 REMARK 3 THROUGH 624 OR RESID 626 THROUGH 627 OR REMARK 3 (RESID 629 AND (NAME C24 OR NAME C25 OR REMARK 3 NAME C26 OR NAME C27 OR NAME C28 OR NAME REMARK 3 C29 OR NAME C30 OR NAME C31)) OR (RESID REMARK 3 630 AND (NAME C28 OR NAME C29 OR NAME C30 REMARK 3 OR NAME C31 OR NAME C32 OR NAME C33)) OR REMARK 3 RESID 636 OR (RESID 1128 AND (NAME C10 OR REMARK 3 NAME C11 OR NAME C12 OR NAME C7 OR NAME REMARK 3 C8 OR NAME C9 )))) REMARK 3 ATOM PAIRS NUMBER : 5814 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN C AND (RESID 23 THROUGH 134 OR REMARK 3 RESID 136 THROUGH 144 OR RESID 146 REMARK 3 THROUGH 200 OR RESID 202 THROUGH 212 OR REMARK 3 RESID 214 THROUGH 377 OR RESID 379 REMARK 3 THROUGH 415 OR RESID 417 THROUGH 470 OR REMARK 3 RESID 472 THROUGH 473 OR RESID 502 REMARK 3 THROUGH 513 OR RESID 515 OR RESID 517 REMARK 3 THROUGH 518)) REMARK 3 SELECTION : (CHAIN C AND (RESID 23 THROUGH 134 OR REMARK 3 RESID 136 THROUGH 144 OR RESID 146 REMARK 3 THROUGH 200 OR RESID 202 THROUGH 212 OR REMARK 3 RESID 214 THROUGH 377 OR RESID 379 REMARK 3 THROUGH 415 OR RESID 417 THROUGH 470 OR REMARK 3 RESID 472 THROUGH 473 OR RESID 902 REMARK 3 THROUGH 913 OR RESID 915 OR RESID 917 REMARK 3 THROUGH 918)) REMARK 3 ATOM PAIRS NUMBER : 5157 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 4 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN D AND (RESID 11 THROUGH 125 OR REMARK 3 RESID 127 THROUGH 232 OR (RESID 233 REMARK 3 THROUGH 234 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 235 THROUGH 294 OR RESID 296 THROUGH 352 REMARK 3 OR RESID 402 OR (RESID 408 AND (NAME C1 REMARK 3 OR NAME C10 OR NAME C11 OR NAME C12 OR REMARK 3 NAME C13 OR NAME C14 OR NAME C15 OR NAME REMARK 3 C16 OR NAME C17 OR NAME C18 OR NAME C19 REMARK 3 OR NAME C2 OR NAME C20 OR NAME C21 OR REMARK 3 NAME C22 OR NAME C23 OR NAME C24 OR NAME REMARK 3 C25 OR NAME C26 OR NAME C27 OR NAME C28 REMARK 3 OR NAME C29 OR NAME C3 OR NAME C30 OR REMARK 3 NAME C31 OR NAME C32 OR NAME C33 OR NAME REMARK 3 C34 OR NAME C35 OR NAME C36 OR NAME C4 OR REMARK 3 NAME C5 OR NAME C6 OR NAME C7 OR NAME C8 REMARK 3 OR NAME C9 OR NAME O1 OR NAME O10 OR NAME REMARK 3 O2 OR NAME O3 OR NAME O4 OR NAME O5 OR REMARK 3 NAME O6 OR NAME O7 OR NAME O8 OR NAME O9 REMARK 3 OR NAME P )))) REMARK 3 SELECTION : (CHAIN D AND ((RESID 11 THROUGH 12 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 13 THROUGH 102 OR REMARK 3 (RESID 103 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 104 REMARK 3 THROUGH 125 OR RESID 127 THROUGH 294 OR REMARK 3 RESID 296 THROUGH 352 OR RESID 403 OR REMARK 3 RESID 409)) REMARK 3 ATOM PAIRS NUMBER : 3292 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 5 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN E AND (RESID 6 OR RESID 8 THROUGH REMARK 3 11 OR RESID 13 THROUGH 58 OR (RESID 59 REMARK 3 THROUGH 60 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 61 REMARK 3 THROUGH 76 OR RESID 78 THROUGH 82)) REMARK 3 SELECTION : (CHAIN E AND (RESID 6 OR RESID 8 THROUGH REMARK 3 11 OR RESID 13 THROUGH 59 OR (RESID 60 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 61 THROUGH 70 OR REMARK 3 (RESID 71 THROUGH 72 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 73 THROUGH 76 OR RESID 78 THROUGH REMARK 3 80 OR (RESID 81 THROUGH 82 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB ))) REMARK 3 ) REMARK 3 ATOM PAIRS NUMBER : 648 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 6 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN F AND (RESID 14 THROUGH 43 OR REMARK 3 RESID 45 OR RESID 101 OR RESID 103)) REMARK 3 SELECTION : (CHAIN F AND (RESID 14 THROUGH 43 OR REMARK 3 RESID 45 OR RESID 101 OR RESID 103)) REMARK 3 ATOM PAIRS NUMBER : 298 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 7 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN H AND (RESID 2 OR RESID 4 THROUGH REMARK 3 201)) REMARK 3 SELECTION : (CHAIN H AND (RESID 2 OR RESID 4 THROUGH REMARK 3 62 OR (RESID 63 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB OR NAME CG )) REMARK 3 OR RESID 64 THROUGH 66 OR RESID 101 REMARK 3 THROUGH 102 OR (RESID 103 AND (NAME C10 REMARK 3 OR NAME C11 OR NAME C12 OR NAME C7 OR REMARK 3 NAME C8 OR NAME C9 )))) REMARK 3 ATOM PAIRS NUMBER : 0 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 8 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN I AND (RESID 1 OR (RESID 2 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 3 THROUGH 37 OR RESID REMARK 3 101 THROUGH 102)) REMARK 3 SELECTION : (CHAIN I AND (RESID 1 THROUGH 37 OR REMARK 3 (RESID 101 THROUGH 102 AND (NAME C27 OR REMARK 3 NAME C28 OR NAME C29 OR NAME C30 OR NAME REMARK 3 C31 OR NAME C32 OR NAME C33 OR NAME C34 REMARK 3 OR NAME C35 OR NAME C36 OR NAME C37 OR REMARK 3 NAME C38)))) REMARK 3 ATOM PAIRS NUMBER : 378 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 9 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN J AND (RESID 5 THROUGH 40 OR RESID REMARK 3 101 THROUGH 102 OR (RESID 103 AND (NAME REMARK 3 C28 OR NAME C29 OR NAME C30 OR NAME C31 REMARK 3 OR NAME C32 OR NAME C33)))) REMARK 3 SELECTION : (CHAIN J AND (RESID 5 THROUGH 40 OR RESID REMARK 3 101 THROUGH 103)) REMARK 3 ATOM PAIRS NUMBER : 334 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 10 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN K REMARK 3 SELECTION : CHAIN K REMARK 3 ATOM PAIRS NUMBER : 428 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 11 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN L AND (RESID 1 THROUGH 7 OR RESID REMARK 3 9 THROUGH 23 OR RESID 25 THROUGH 37 OR REMARK 3 RESID 101)) REMARK 3 SELECTION : (CHAIN L AND (RESID 1 THROUGH 7 OR RESID REMARK 3 9 THROUGH 23 OR RESID 25 THROUGH 37 OR REMARK 3 RESID 101)) REMARK 3 ATOM PAIRS NUMBER : 412 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 12 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN M AND (RESID 1 THROUGH 15 OR RESID REMARK 3 17 THROUGH 34 OR RESID 101 THROUGH 102)) REMARK 3 SELECTION : (CHAIN M AND (RESID 1 THROUGH 15 OR RESID REMARK 3 17 THROUGH 32 OR (RESID 33 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 34 OR (RESID 101 AND (NAME C1 OR REMARK 3 NAME C1 OR NAME C10 OR NAME C11 OR NAME REMARK 3 C12 OR NAME C2 OR NAME C2 OR NAME C3 OR REMARK 3 NAME C3 OR NAME C4 OR NAME C4 OR NAME C5 REMARK 3 OR NAME C5 OR NAME C6 OR NAME C6 OR NAME REMARK 3 C7 OR NAME C8 OR NAME C9 OR NAME O1 OR REMARK 3 NAME O2 OR NAME O3 OR NAME O5 OR NAME O6)) REMARK 3 OR RESID 102)) REMARK 3 ATOM PAIRS NUMBER : 386 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 13 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN O AND (RESID 4 THROUGH 48 OR RESID REMARK 3 50 THROUGH 68 OR RESID 70 THROUGH 73 OR REMARK 3 RESID 75 THROUGH 79 OR RESID 81 THROUGH REMARK 3 97 OR RESID 100 THROUGH 178 OR RESID 180 REMARK 3 THROUGH 190 OR RESID 192 THROUGH 195 OR REMARK 3 RESID 197 THROUGH 216 OR RESID 218 REMARK 3 THROUGH 246 OR RESID 301)) REMARK 3 SELECTION : (CHAIN O AND (RESID 4 THROUGH 48 OR RESID REMARK 3 50 THROUGH 61 OR (RESID 62 THROUGH 63 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 64 THROUGH 68 OR REMARK 3 RESID 70 THROUGH 73 OR RESID 75 THROUGH REMARK 3 79 OR RESID 81 THROUGH 97 OR RESID 100 REMARK 3 THROUGH 178 OR RESID 180 OR (RESID 181 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 182 THROUGH 190 REMARK 3 OR RESID 192 THROUGH 195 OR RESID 197 REMARK 3 THROUGH 216 OR RESID 218 THROUGH 246 OR REMARK 3 RESID 301)) REMARK 3 ATOM PAIRS NUMBER : 2156 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 14 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN T AND (RESID 1 THROUGH 24 OR RESID REMARK 3 26 THROUGH 30 OR RESID 101)) REMARK 3 SELECTION : (CHAIN T AND (RESID 1 THROUGH 24 OR RESID REMARK 3 26 THROUGH 30 OR RESID 101)) REMARK 3 ATOM PAIRS NUMBER : 312 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 15 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN U AND RESID 8 THROUGH 104) REMARK 3 SELECTION : (CHAIN U AND ((RESID 8 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 9 THROUGH 50 OR (RESID 51 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 52 THROUGH 85 OR REMARK 3 (RESID 86 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 87 REMARK 3 THROUGH 104)) REMARK 3 ATOM PAIRS NUMBER : 926 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 16 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN V AND (RESID 1 OR RESID 3 THROUGH REMARK 3 14 OR RESID 16 OR (RESID 17 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 18 THROUGH 54 OR RESID 56 REMARK 3 THROUGH 105 OR RESID 107 THROUGH 109 OR REMARK 3 (RESID 110 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 111 REMARK 3 THROUGH 137 OR RESID 201)) REMARK 3 SELECTION : (CHAIN V AND (RESID 1 OR RESID 3 THROUGH REMARK 3 14 OR RESID 16 THROUGH 54 OR RESID 56 REMARK 3 THROUGH 105 OR RESID 107 THROUGH 137 OR REMARK 3 RESID 201)) REMARK 3 ATOM PAIRS NUMBER : 1256 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 17 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN X AND RESID 2 THROUGH 40) REMARK 3 SELECTION : (CHAIN X AND (RESID 2 THROUGH 37 OR REMARK 3 (RESID 38 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 39 REMARK 3 THROUGH 40)) REMARK 3 ATOM PAIRS NUMBER : 341 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 18 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN Y AND (RESID 17 THROUGH 29 OR REMARK 3 RESID 31 THROUGH 46)) REMARK 3 SELECTION : (CHAIN Y AND (RESID 17 THROUGH 29 OR REMARK 3 RESID 31 THROUGH 42 OR (RESID 43 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 44 THROUGH 46)) REMARK 3 ATOM PAIRS NUMBER : 250 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 19 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN Z AND (RESID 1 THROUGH 2 OR (RESID REMARK 3 3 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 4 THROUGH REMARK 3 41 OR (RESID 42 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 43 THROUGH 62)) REMARK 3 SELECTION : (CHAIN Z AND (RESID 1 THROUGH 33 OR REMARK 3 (RESID 34 THROUGH 35 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 36 THROUGH 62)) REMARK 3 ATOM PAIRS NUMBER : 517 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YQ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1300031087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 621644 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.81 REMARK 200 R MERGE FOR SHELL (I) : 1.29700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200