Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: Saposin

Lipid-binding can promote conformational changes and oligomerisation in some members
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Saposin-like [47861]
    5 helices; folded leaf, closed
  4. Superfamily: Saposin [47862]
    Lipid-binding can promote conformational changes and oligomerisation in some members
    link to SUPERFAMILY database - Superfamily

Families:

  1. Saposin B [81806] (1)
    the alternative subunit conformation is an open four-helical bundle; helices 3 and 4 form a contiguous helix
    1. Saposin B [81807]
      1. Human (Homo sapiens) [TaxId: 9606] [81808] (1)
        1. 1n69 picpic
          the alternative subunit conformation
          complexed with peh
          1. chain a [80118] picpiclink
          2. chain b [80119] picpiclink
          3. chain c [80120] picpiclink
  2. NKL-like [47863] (3)
    1. NK-lysin, NKL [47864]
      1. Pig (Sus scrofa) [TaxId: 9823] [47865] (1)
        1. 1nkl picpic
          CASP2
          1. chain a [18140] picpiclink
    2. Granulysin, NKG5 protein [81809]
      1. Human (Homo sapiens) [TaxId: 9606] [81810] (1)
        1. 1l9l picpic
          complexed with eoh, mpo, so4
          1. chain a [77827] picpiclink
    3. Saposin C [89077]
      1. Human (Homo sapiens) [TaxId: 9606] [89078] (7)
        1. 2gtg picpic
          automatically matched to d1m12a_
          1. region a:2-79 [135649] picpiclink
        2. 2qyp picpic
          automatically matched to d1m12a_
          1. region a:1-78 [151477] picpiclink
        3. 2z9a picpic
          automatically matched to d1m12a_
          complexed with gol
          1. region a:2-78 [154235] picpiclink
        4. 2qyp picpic
          automatically matched to d1m12a_
          1. region b:1-78 [151478] picpiclink
        5. 2z9a picpic
          automatically matched to d1m12a_
          complexed with gol
          1. region b:2-78 [154236] picpiclink
        6. 1m12 picpic
          1. chain a [84745] picpiclink
        7. 1sn6 picpic
          automatically matched to d1m12a_
          1. region a:1-84 [118972] picpiclink
  3. Ameobapore A [101266] (1)
    1. Ameobapore A [101267]
      pore-forming toxin
      1. Entamoeba histolytica [TaxId: 5759] [101268] (1)
        1. 1of9 picpic
          1. chain a [92821] picpiclink
  4. Swaposin [47866] (1)
    circularly permuted saposin domain inserted in plant acid proteases
    1. (Pro)phytepsin [47867]
      1. Barley (Hordeum vulgare) [TaxId: 4513] [47868] (1)
        1. 1qdm picpicxref
          1. region a:1s-104s [18141] picpiclink
          2. region b:1s-104s [18142] picpiclink
          3. region c:1s-104s [18143] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk