Structural Classification of Proteins
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Fold: Left-handed superhelix

core: 4-5 helices; bundle; left-handed superhelix

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Left-handed superhelix [47916]
    core: 4-5 helices; bundle; left-handed superhelix

Superfamilies:

  1. C-terminal domain of alpha and beta subunits of F1 ATP synthase [47917] (1)
    link to SUPERFAMILY database - Superfamily
    1. C-terminal domain of alpha and beta subunits of F1 ATP synthase [47918] (8)
      1. F1 ATP synthase alpha subunit, domain 3 [88886]
        1. Cow (Bos taurus) [TaxId: 9913] [88893] (18) picpic
          SQ P19483
        2. Rat (Rattus norvegicus) [TaxId: 10116] [88925] (2) picpic
        3. Bacillus sp., strain ps3 [TaxId: 1409] [88926] (1) picpic
        4. Spinach (Spinacia oleracea), chloroplast [TaxId: 3562] [88927] (2) picpic
      2. F1 ATP synthase beta subunit, domain 3 [88928]
        1. Cow (Bos taurus) [TaxId: 9913] [88929] (12) picpic
          SQ P00829
        2. Rat (Rattus norvegicus) [TaxId: 10116] [88930] (8) picpic
        3. Bacillus sp., strain ps3 [TaxId: 1409] [88931] (1) picpic
        4. Spinach (Spinacia oleracea), chloroplast [TaxId: 3562] [88932] (2) picpic
  2. Ypt/Rab-GAP domain of gyp1p [47923] (1)
    link to SUPERFAMILY database - Superfamily
    1. Ypt/Rab-GAP domain of gyp1p [47924] (1)
      duplication: contains two similar domains of this fold
      1. Ypt/Rab-GAP domain of gyp1p [47925]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [47926] (3) picpic
  3. 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain [69055] (1)
    link to SUPERFAMILY database - Superfamily
    1. 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain [69056] (2)
      1. 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain [69057]
        1. Escherichia coli [TaxId: 562] [69058] (12) picpic
          SQ P45568
        2. Zymomonas mobilis [TaxId: 542] [109891] (2) picpic
          SQ Q9X5F2
  4. BH3980-like [158560] (1)
    1. BH3980-like [158561] (3)
      Pfam 06304; DUF1048
      1. Hypothetical protein BCE3448 [158562]
        1. Bacillus cereus [TaxId: 1396] [158563] (2) picpic
          SQ Q734F7 14-95
      2. Uncharacterized protein BH3980 [158564]
        1. Bacillus halodurans [TaxId: 86665] [158565] (1) picpic
          SQ Q9K5V7 1-112
      3. Uncharacterized protein BH3976 [158566]
        1. Bacillus halodurans [TaxId: 86665] [158567] (1) picpic
          SQ Q9K5W1 16-105
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk