Structural Classification of Proteins
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Superfamily: post-AAA+ oligomerization domain-like

associated with N-terminal domain from the AAA+ family of P-loop hydrolases
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: post-AAA+ oligomerization domain-like [48018]
    core: 5 helices: bundle
  4. Superfamily: post-AAA+ oligomerization domain-like [48019]
    associated with N-terminal domain from the AAA+ family of P-loop hydrolases
    link to SUPERFAMILY database - Superfamily

Families:

  1. DNA polymerase III clamp loader subunits, C-terminal domain [48020] (10)
    contains an extra helix
    1. gamma subunit [63578]
      1. Escherichia coli [TaxId: 562] [63579] (3) picpic
        SQ P06710 5-368
      2. Thermotoga maritima [TaxId: 2336] [140678] (1) picpic
        SQ Q9WZM9 209-306
    2. delta prime subunit [48021]
      1. Escherichia coli [TaxId: 562] [48022] (4) picpic
        SQ P28631
    3. delta subunit [63580]
      1. Escherichia coli [TaxId: 562] [63581] (4) picpic
        SQ P28630
    4. Replication factor C [63582]
      1. Archaeon Pyrococcus furiosus [TaxId: 2261] [63583] (1) picpic
    5. Replication factor C1 [109894]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109895] (1) picpic
        SQ P38630 295-696 # helical segment (667-696) together with unassigned C-terminal sequence forms an all-alpha subdomain
    6. Replication factor C4 [109896]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109897] (1) picpic
        SQ P40339
    7. Replication factor C3 [109898]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109899] (1) picpic
        SQ P38629
    8. Replication factor C2 [109900]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109901] (1) picpic
        SQ P40348
    9. Replication factor C5 [109902]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109903] (1) picpic
        SQ P38251
  2. MgsA/YrvN C-terminal domain-like [158600] (3)
    1. Uncharacterized protein NTHI1458 [158601]
      1. Haemophilus influenzae [TaxId: 727] [158602] (2) picpic
        SQ Q4QL22 251-434
    2. Uncharacterized protein EfaeDRAFT_0938 [158603]
      1. Enterococcus faecium [TaxId: 1352] [158604] (20) picpic
        SQ Q3XY27 238-423! SQ Q3XY27 241-328
    3. Uncharacterized protein YrvN [158605]
      1. Prochlorococcus marinus [TaxId: 1219] [158606] (2) picpic
        SQ Q7V3J8 258-420
        PMM0077
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk