Structural Classification of Proteins
home mail help root up expand collapse

Fold: PAP/OAS1 substrate-binding domain

core: 5-helical bundle; up-and-down; right-handed twist

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: PAP/OAS1 substrate-binding domain [81632]
    core: 5-helical bundle; up-and-down; right-handed twist

Superfamilies:

  1. PAP/OAS1 substrate-binding domain [81631] (5)
    this domain follows the catalytic nucleotidyltransferase domain
    link to SUPERFAMILY database - Superfamily
    1. Poly(A) polymerase, PAP, middle domain [81630] (2)
      1. Poly(A) polymerase, PAP, middle domain [81629]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [81628] (7)
          1. 2q66 picpicxrefxref
            automatically matched to d1fa0a3
            complexed with atp, edo, mg; mutant
            1. region a:202-351 [150057] picpiclink
          2. 2hhp picpicxrefxref
            automatically matched to d1fa0a3
            complexed with flc, mg
            1. region a:202-351 [136503] picpiclink
          3. 3c66 picpicxrefxrefxrefxref
            automatically matched to d1fa0a3
            complexed with gol, mes
            1. region a:202-351 [155969] picpiclink
          4. 3c66 picpicxrefxrefxrefxref
            automatically matched to d1fa0a3
            complexed with gol, mes
            1. region b:202-351 [155972] picpiclink
          5. 2o1p picpicxrefxrefxrefxref
            automatically matched to d1fa0a3
            1. region a:202-351 [138875] picpiclink
          6. 2o1p picpicxrefxrefxrefxref
            automatically matched to d1fa0a3
            1. region b:202-351 [138878] picpiclink
          7. 1fa0 picpicxrefxref
            complexed with 3ad, 3at, mn, pop
            1. region a:202-351 [75837] picpiclink
            2. region b:202-351 [75839] picpiclink
        2. Cow (Bos taurus) [TaxId: 9913] [56707] (3)
          SQ P25500 18-497
          1. 1q79 picpicxrefxref
            complexed with 3at, gol, mn
            1. region a:215-364 [104548] picpiclink
          2. 1f5a picpicxrefxref
            complexed with 3at, 3po, mn; mutant
            1. region a:215-364 [75835] picpiclink
          3. 1q78 picpicxrefxref
            complexed with 3at, mg
            1. region a:215-364 [104545] picpiclink
    2. 2'-5'-oligoadenylate synthetase 1, OAS1, second domain [101271] (1)
      1. 2'-5'-oligoadenylate synthetase 1, OAS1, second domain [101272]
        1. Pig (Sus scrofa) [TaxId: 9823] [101273] (1)
          1. 1px5 picpicxref
            complexed with so4, ycm
            1. region a:201-346 [95277] picpiclink
            2. region b:201-349 [95279] picpiclink
    3. Archaeal tRNA CCA-adding enzyme substrate-binding domain [101274] (1)
      1. tRNA nucleotidyltransferase, second domain [101275]
        1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [101276] (28)
          SQ O28126
          1. 1r89 picpicxrefxref
            complexed with cl, ctp, mg, mn, na
            1. region a:143-257 [97221] picpiclink
          2. 1uet picpicxrefxref
            complexed with act, ca, mg
            1. region a:143-257 [99272] picpiclink
          3. 1r8c picpicxrefxref
            complexed with mn, na, utp
            1. region a:143-257 [97230] picpiclink
          4. 1r8b picpicxrefxref
            complexed with atp, cl, mg, mn, na
            1. region a:143-257 [97227] picpiclink
          5. 1ueu picpicxrefxref
            complexed with act, ctp, mg
            1. region a:143-257 [99275] picpiclink
          6. 1tfw picpicxrefxref
            complexed with atp, mg
            1. region a:143-257 [106862] picpiclink
            2. region b:143-257 [106865] picpiclink
            3. region c:143-257 [106868] picpiclink
            4. region d:143-257 [106871] picpiclink
          7. 1r8a picpicxrefxref
            complexed with mn, na
            1. region a:143-257 [97224] picpiclink
          8. 2dra picpicxrefxref
            automatically matched to d1r89a1
            complexed with atp, mg, so4
            1. region a:143-257 [131666] picpiclink
          9. 2dvi picpicxrefxref
            automatically matched to d1r89a1
            complexed with ctp, mg, so4
            1. region a:143-257 [131790] picpiclink
          10. 2dr8 picpicxrefxref
            automatically matched to d1r89a1
            complexed with ctp, mg, so4
            1. region a:143-257 [131660] picpiclink
          11. 1uev picpicxrefxref
            complexed with atp, ca, mg
            1. region a:143-257 [99278] picpiclink
          12. 2zh6 picpicxrefxref
            automatically matched to d1r89a1
            complexed with atp, mg, so4
            1. region a:143-257 [154448] picpiclink
          13. 2zh2 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154436] picpiclink
          14. 2zh3 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154439] picpiclink
          15. 2zh4 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154442] picpiclink
          16. 2zh5 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154445] picpiclink
          17. 2zh8 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154454] picpiclink
          18. 2dr7 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [131657] picpiclink
          19. 2dr9 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [131663] picpiclink
          20. 2drb picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [131669] picpiclink
          21. 2zh1 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154433] picpiclink
          22. 2dr5 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [131654] picpiclink
          23. 2zh9 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154457] picpiclink
          24. 2zhb picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154463] picpiclink
          25. 2zh7 picpicxrefxref
            automatically matched to d1r89a1
            complexed with so4
            1. region a:143-257 [154451] picpiclink
          26. 2zha picpicxrefxref
            automatically matched to d1r89a1
            complexed with ctp, mg, so4
            1. region a:143-257 [154460] picpiclink
          27. 1tfy picpicxrefxref
            complexed with ctp, mg
            1. region a:143-257 [106874] picpiclink
            2. region b:143-257 [106877] picpiclink
            3. region c:143-257 [106880] picpiclink
            4. region d:143-257 [106883] picpiclink
          28. 1sz1 picpicxrefxref
            complexed with 1ma, 2mg, 5mc, 5mu, 7mg, h2u, m2g, omc, omg, psu, yyg
            1. region a:143-257 [106133] picpiclink
            2. region b:143-257 [106136] picpiclink
    4. RNA editing terminal uridyl transferase 2, RET2, domain 2 [140679] (1)
      1. RNA editing terminal uridyl transferase 2, TUTase 2, RET2 [140680]
        1. Trypanosoma brucei [TaxId: 5691] [140681] (1)
          SQ Q86MV5 289-471
          1. 2b4v picpicxref
            complexed with k; mutant
            1. region a:289-471 [127864] picpiclink
    5. AadK C-terminal domain-like [158607] (1)
      C-terminal part of Pfam 04439; Streptomycin adenylyltransferase; contains extra C-terminal helix
      1. Aminoglycoside 6-adenylyltransferase AadK [158608]
        1. Bacillus subtilis [TaxId: 1423] [158609] (1)
          SQ P17585 138-282
          1. 2pbe picpicxref
            1. region a:138-282 [149355] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk