Structural Classification of Proteins
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Superfamily: PAP/OAS1 substrate-binding domain

this domain follows the catalytic nucleotidyltransferase domain
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: PAP/OAS1 substrate-binding domain [81632]
    core: 5-helical bundle; up-and-down; right-handed twist
  4. Superfamily: PAP/OAS1 substrate-binding domain [81631]
    this domain follows the catalytic nucleotidyltransferase domain
    link to SUPERFAMILY database - Superfamily

Families:

  1. Poly(A) polymerase, PAP, middle domain [81630] (2)
    1. Poly(A) polymerase, PAP, middle domain [81629]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [81628] (7)
        1. 2q66 picpicxrefxref
          automatically matched to d1fa0a3
          complexed with atp, edo, mg; mutant
          1. region a:202-351 [150057] picpiclink
        2. 2hhp picpicxrefxref
          automatically matched to d1fa0a3
          complexed with flc, mg
          1. region a:202-351 [136503] picpiclink
        3. 3c66 picpicxrefxrefxrefxref
          automatically matched to d1fa0a3
          complexed with gol, mes
          1. region a:202-351 [155969] picpiclink
        4. 3c66 picpicxrefxrefxrefxref
          automatically matched to d1fa0a3
          complexed with gol, mes
          1. region b:202-351 [155972] picpiclink
        5. 2o1p picpicxrefxrefxrefxref
          automatically matched to d1fa0a3
          1. region a:202-351 [138875] picpiclink
        6. 2o1p picpicxrefxrefxrefxref
          automatically matched to d1fa0a3
          1. region b:202-351 [138878] picpiclink
        7. 1fa0 picpicxrefxref
          complexed with 3ad, 3at, mn, pop
          1. region a:202-351 [75837] picpiclink
          2. region b:202-351 [75839] picpiclink
      2. Cow (Bos taurus) [TaxId: 9913] [56707] (3)
        SQ P25500 18-497
        1. 1q79 picpicxrefxref
          complexed with 3at, gol, mn
          1. region a:215-364 [104548] picpiclink
        2. 1f5a picpicxrefxref
          complexed with 3at, 3po, mn; mutant
          1. region a:215-364 [75835] picpiclink
        3. 1q78 picpicxrefxref
          complexed with 3at, mg
          1. region a:215-364 [104545] picpiclink
  2. 2'-5'-oligoadenylate synthetase 1, OAS1, second domain [101271] (1)
    1. 2'-5'-oligoadenylate synthetase 1, OAS1, second domain [101272]
      1. Pig (Sus scrofa) [TaxId: 9823] [101273] (1)
        1. 1px5 picpicxref
          complexed with so4, ycm
          1. region a:201-346 [95277] picpiclink
          2. region b:201-349 [95279] picpiclink
  3. Archaeal tRNA CCA-adding enzyme substrate-binding domain [101274] (1)
    1. tRNA nucleotidyltransferase, second domain [101275]
      1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [101276] (28)
        SQ O28126
        1. 1r89 picpicxrefxref
          complexed with cl, ctp, mg, mn, na
          1. region a:143-257 [97221] picpiclink
        2. 1uet picpicxrefxref
          complexed with act, ca, mg
          1. region a:143-257 [99272] picpiclink
        3. 1r8c picpicxrefxref
          complexed with mn, na, utp
          1. region a:143-257 [97230] picpiclink
        4. 1r8b picpicxrefxref
          complexed with atp, cl, mg, mn, na
          1. region a:143-257 [97227] picpiclink
        5. 1ueu picpicxrefxref
          complexed with act, ctp, mg
          1. region a:143-257 [99275] picpiclink
        6. 1tfw picpicxrefxref
          complexed with atp, mg
          1. region a:143-257 [106862] picpiclink
          2. region b:143-257 [106865] picpiclink
          3. region c:143-257 [106868] picpiclink
          4. region d:143-257 [106871] picpiclink
        7. 1r8a picpicxrefxref
          complexed with mn, na
          1. region a:143-257 [97224] picpiclink
        8. 2dra picpicxrefxref
          automatically matched to d1r89a1
          complexed with atp, mg, so4
          1. region a:143-257 [131666] picpiclink
        9. 2dvi picpicxrefxref
          automatically matched to d1r89a1
          complexed with ctp, mg, so4
          1. region a:143-257 [131790] picpiclink
        10. 2dr8 picpicxrefxref
          automatically matched to d1r89a1
          complexed with ctp, mg, so4
          1. region a:143-257 [131660] picpiclink
        11. 1uev picpicxrefxref
          complexed with atp, ca, mg
          1. region a:143-257 [99278] picpiclink
        12. 2zh6 picpicxrefxref
          automatically matched to d1r89a1
          complexed with atp, mg, so4
          1. region a:143-257 [154448] picpiclink
        13. 2zh2 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154436] picpiclink
        14. 2zh3 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154439] picpiclink
        15. 2zh4 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154442] picpiclink
        16. 2zh5 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154445] picpiclink
        17. 2zh8 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154454] picpiclink
        18. 2dr7 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [131657] picpiclink
        19. 2dr9 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [131663] picpiclink
        20. 2drb picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [131669] picpiclink
        21. 2zh1 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154433] picpiclink
        22. 2dr5 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [131654] picpiclink
        23. 2zh9 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154457] picpiclink
        24. 2zhb picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154463] picpiclink
        25. 2zh7 picpicxrefxref
          automatically matched to d1r89a1
          complexed with so4
          1. region a:143-257 [154451] picpiclink
        26. 2zha picpicxrefxref
          automatically matched to d1r89a1
          complexed with ctp, mg, so4
          1. region a:143-257 [154460] picpiclink
        27. 1tfy picpicxrefxref
          complexed with ctp, mg
          1. region a:143-257 [106874] picpiclink
          2. region b:143-257 [106877] picpiclink
          3. region c:143-257 [106880] picpiclink
          4. region d:143-257 [106883] picpiclink
        28. 1sz1 picpicxrefxref
          complexed with 1ma, 2mg, 5mc, 5mu, 7mg, h2u, m2g, omc, omg, psu, yyg
          1. region a:143-257 [106133] picpiclink
          2. region b:143-257 [106136] picpiclink
  4. RNA editing terminal uridyl transferase 2, RET2, domain 2 [140679] (1)
    1. RNA editing terminal uridyl transferase 2, TUTase 2, RET2 [140680]
      1. Trypanosoma brucei [TaxId: 5691] [140681] (1)
        SQ Q86MV5 289-471
        1. 2b4v picpicxref
          complexed with k; mutant
          1. region a:289-471 [127864] picpiclink
  5. AadK C-terminal domain-like [158607] (1)
    C-terminal part of Pfam 04439; Streptomycin adenylyltransferase; contains extra C-terminal helix
    1. Aminoglycoside 6-adenylyltransferase AadK [158608]
      1. Bacillus subtilis [TaxId: 1423] [158609] (1)
        SQ P17585 138-282
        1. 2pbe picpicxref
          1. region a:138-282 [149355] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk