Structural Classification of Proteins
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Superfamily: IpaD-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: IpaD-like [140692]
    6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest
  4. Superfamily: IpaD-like [140693]
    link to SUPERFAMILY database - Superfamily

Families:

  1. IpaD-like [140694] (2)
    Pfam 06511
    1. Invasin IpaD [140695]
      1. Shigella flexneri [TaxId: 623] [140696] (6)
        SQ P18013 128-320! SQ P18013 144-314! SQ P18013 39-322
        1. 2j0n picpic
          truncated, lacks two N-terminal helices
          1. region a:144-314 [137899] picpiclink
        2. 2j0n picpic
          automatically matched to 2J0N A:144-314
          1. region b:144-314 [137900] picpiclink
        3. 2j0o picpic
          complexed with gol
          1. region a:39-322 [137901] picpiclink
        4. 2j0o picpic
          automatically matched to 2J0O A:39-322
          complexed with gol
          1. region b:39-322 [137902] picpiclink
        5. 2jaa picpic
          truncated, lacks two N-terminal helices
          1. region a:128-320 [138238] picpiclink
        6. 2jaa picpic
          automatically matched to 2JAA A:128-320
          1. region b:128-320 [138239] picpiclink
    2. Putative membrane antigen BipD [140697]
      1. Burkholderia pseudomallei [TaxId: 28450] [140698] (5)
        SQ Q63K37 35-301
        1. 2izp picpic
          automatically matched to 2J9T A:35-301
          1. region a:1035-1301 [137826] picpiclink
        2. 2izp picpic
          automatically matched to 2J9T A:35-301
          1. region b:2037-2301 [137827] picpiclink
        3. 2ixr picpic
          automatically matched to 2J9T A:35-301
          1. region a:35-301 [137786] picpiclink
        4. 2j9t picpic
          complexed with bo3, flc
          1. region a:35-301 [138153] picpiclink
        5. 2j9t picpic
          automatically matched to 2J9T A:35-301
          complexed with bo3, flc
          1. region b:35-301 [138154] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk