Structural Classification of Proteins
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Superfamily: L27 domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: L27 domain [101287]
    6 helices, heterodimer of 3-helical domains
  4. Superfamily: L27 domain [101288]
    link to SUPERFAMILY database - Superfamily

Families:

  1. L27 domain [101289] (9)
    1. Associated tight junction protein Pals-1 [101290]
      1. Human (Homo sapiens) [TaxId: 9606] [101291] (1)
        1. 1vf6 picpicxref
          L27n domain; complexed with L27 domain of Patj
          1. chain a [100600] picpiclink
          2. chain b [100601] picpiclink
      2. Rat (Rattus norvegicus) [TaxId: 10116] [140706] (2)
        SQ Q63ZW7 4-65
        identical sequence to mouse domain
        1. 1y76 picpicxrefxref
          1. region a:4-65 [122683] picpiclink
        2. 1y76 picpicxrefxref
          automatically matched to 1Y76 A:4-65
          1. region c:4-65 [122685] picpiclink
    2. Maguk p55 subfamily member 5, Patj [101292]
      1. Mouse (Mus musculus) [TaxId: 10090] [101293] (1)
        1. 1vf6 picpicxref
          complexed with L27n domain of Pals-1
          1. chain c [100602] picpiclink
          2. chain d [100603] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [140707] (2)
        SQ Q8N3R9 118-177
        1. 1y76 picpicxrefxref
          1. region b:80-139 [122684] picpiclink
        2. 1y76 picpicxrefxref
          automatically matched to 1Y76 B:80-139
          1. region d:80-139 [122686] picpiclink
    3. Presynaptic protein sap97 [101294]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [101295] (1)
        1. 1rso picpicxref
          mutant
          1. chain a [97811] picpiclink
          2. chain c [97813] picpiclink
    4. Peripheral plasma membrane protein cask [101296]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [101297] (1)
        1. 1rso picpicxref
          mutant
          1. chain b [97812] picpiclink
          2. chain d [97814] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [140708] (3)
        SQ O14936 403-456
        1. 1y74 picpicxrefxref
          automatically matched to 1ZL8 B:106-159
          1. region b:83-132 [122680] picpiclink
        2. 1y74 picpicxrefxref
          automatically matched to 1ZL8 B:106-159
          1. region d:83-132 [122682] picpiclink
        3. 1zl8 picpicxref
          1. region b:106-159 [125239] picpiclink
    5. Lin-7 [140709]
      1. Mouse (Mus musculus) [TaxId: 10090] [140710] (2)
        SQ O88951 8-64
        homolog B
        1. 1y74 picpicxrefxref
          1. region a:17-73 [122679] picpiclink
        2. 1y74 picpicxrefxref
          automatically matched to 1Y74 A:17-73
          1. region c:17-73 [122681] picpiclink
      2. Caenorhabditis elegans [TaxId: 6239] [140711] (1)
        SQ Q9U245 116-165
        1. 1zl8 picpicxref
          1. region a:4-53 [125238] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk