Structural Classification of Proteins
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Family: L27 domain

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: L27 domain [101287]
    6 helices, heterodimer of 3-helical domains
  4. Superfamily: L27 domain [101288]
    link to SUPERFAMILY database - Superfamily
  5. Family: L27 domain [101289]

Protein Domains:

  1. Associated tight junction protein Pals-1 [101290]
    1. Human (Homo sapiens) [TaxId: 9606] [101291] (1)
      1. 1vf6 picpicxref
        L27n domain; complexed with L27 domain of Patj
        1. chain a [100600] picpiclink
        2. chain b [100601] picpiclink
    2. Rat (Rattus norvegicus) [TaxId: 10116] [140706] (2)
      SQ Q63ZW7 4-65
      identical sequence to mouse domain
      1. 1y76 picpicxrefxref
        1. region a:4-65 [122683] picpiclink
      2. 1y76 picpicxrefxref
        automatically matched to 1Y76 A:4-65
        1. region c:4-65 [122685] picpiclink
  2. Maguk p55 subfamily member 5, Patj [101292]
    1. Mouse (Mus musculus) [TaxId: 10090] [101293] (1)
      1. 1vf6 picpicxref
        complexed with L27n domain of Pals-1
        1. chain c [100602] picpiclink
        2. chain d [100603] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [140707] (2)
      SQ Q8N3R9 118-177
      1. 1y76 picpicxrefxref
        1. region b:80-139 [122684] picpiclink
      2. 1y76 picpicxrefxref
        automatically matched to 1Y76 B:80-139
        1. region d:80-139 [122686] picpiclink
  3. Presynaptic protein sap97 [101294]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [101295] (1)
      1. 1rso picpicxref
        mutant
        1. chain a [97811] picpiclink
        2. chain c [97813] picpiclink
  4. Peripheral plasma membrane protein cask [101296]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [101297] (1)
      1. 1rso picpicxref
        mutant
        1. chain b [97812] picpiclink
        2. chain d [97814] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [140708] (3)
      SQ O14936 403-456
      1. 1y74 picpicxrefxref
        automatically matched to 1ZL8 B:106-159
        1. region b:83-132 [122680] picpiclink
      2. 1y74 picpicxrefxref
        automatically matched to 1ZL8 B:106-159
        1. region d:83-132 [122682] picpiclink
      3. 1zl8 picpicxref
        1. region b:106-159 [125239] picpiclink
  5. Lin-7 [140709]
    1. Mouse (Mus musculus) [TaxId: 10090] [140710] (2)
      SQ O88951 8-64
      homolog B
      1. 1y74 picpicxrefxref
        1. region a:17-73 [122679] picpiclink
      2. 1y74 picpicxrefxref
        automatically matched to 1Y74 A:17-73
        1. region c:17-73 [122681] picpiclink
    2. Caenorhabditis elegans [TaxId: 6239] [140711] (1)
      SQ Q9U245 116-165
      1. 1zl8 picpicxref
        1. region a:4-53 [125238] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk