Structural Classification of Proteins
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Fold: SopE-like GEF domain

multihelical; consists of two all-alpha subdomains each containing a 3-helical bundle with right-handed twist

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SopE-like GEF domain [81831]
    multihelical; consists of two all-alpha subdomains each containing a 3-helical bundle with right-handed twist

Superfamilies:

  1. SopE-like GEF domain [81832] (1)
    link to SUPERFAMILY database - Superfamily
    1. SopE-like GEF domain [81833] (3)
      C-terminal part of Pfam 05364
      1. GEF domain of SopE toxin [81834]
        1. Salmonella typhimurium [TaxId: 90371] [81835] (1)
          1. 1gzs picpicxref
            complexed with so4
            1. chain b [76425] picpiclink
            2. chain d [76427] picpiclink
      2. Effector protein SopE2 [109939]
        1. Salmonella typhimurium [TaxId: 90371] [109940] (2)
          SQ Q9KIZ2
          1. 1r6e picpic
            1. chain a [104821] picpiclink
          2. 1r9k picpic
            1. chain a [104869] picpiclink
      3. Effector protein BopE [158691]
        1. Burkholderia pseudomallei [TaxId: 28450] [158692] (2)
          SQ Q63K41 78-261
          1. 2jok picpic
            automatically matched to 2JOL A:78-261
            1. region a:78-261 [148158] picpiclink
          2. 2jol picpic
            1. region a:78-261 [148159] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk