Structural Classification of Proteins

Family: PDEase

: Pfam 00233; multihelical; can be divided into three subdomains

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: HD-domain/PDEase-like [109603]
multihelical; consists of two different alpha-helical bundles
Superfamily: HD-domain/PDEase-like [109604]
uperfamily
Family: PDEase [48548]
Pfam 00233; multihelical; can be divided into three subdomains

Protein Domains:

Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b [48549]
1. Human (Homo sapiens) [TaxId: 9606] [48550] (14)
  SQ Q07343 324-667
  1. 1f0j
    complexed with ars, mg, zn; mutant
    1. chain a [19346]
    2. chain b [19347]
  2. 1xm6
    complexed with 5rm, mg, zn
    1. chain a [115471]
    2. chain b [115472]
  3. 1ror
    complexed with amp, zn; mutant
    1. chain a [111901]
    2. chain b [111902]
  4. 1ro6
    complexed with ars, mn, rol, zn; mutant
    1. chain a [111897]
    2. chain b [111898]
  5. 1xlz
    complexed with fil, mg, zn
    1. chain a [115459]
    2. chain b [115460]
  6. 1ro9
    complexed with 8br, zn; mutant
    1. chain a [111899]
    2. chain b [111900]
  7. 1xn0
    complexed with 4rr, 4sr, mg, zn
    1. chain a [115571]
    2. chain b [115572]
  8. 1xmu
    complexed with mg, rof, zn
    1. chain a [115562]
    2. chain b [115563]
  9. 1tb5
    complexed with amp, mg, zn
    1. chain a [106735]
    2. chain b [106736]
  10. 1xos
    complexed with mg, so4, via, zn
    1. chain a [115712]
  11. 1xm4
    complexed with mg, pil, zn
    1. chain a [115465]
    2. chain b [115466]
  12. 1xlx
    complexed with cio, mg, zn
    1. chain a [115455]
    2. chain b [115456]
  13. 1xot
    complexed with mg, vdn, zn
    1. chain a [115713]
    2. chain b [115714]
  14. 1xmy
    complexed with 4rr, mg, zn
    1. chain a [115569]
    2. chain b [115570]
Catalytic domain of cyclic nucleotide phosphodiesterase pde4d [89151]
1. Human (Homo sapiens) [TaxId: 9606] [89152] (39)
  SQ Q08499 388-713
  1. 1y2k
    automatically matched to d1oyna_
    complexed with 7de, edo, mg, zn
    1. region a:86-411 [122571]
  2. 1y2k
    automatically matched to d1oyna_
    complexed with 7de, edo, mg, zn
    1. region b:86-411 [122572]
  3. 1y2b
    automatically matched to d1oyna_
    complexed with dee, edo, mg, zn
    1. region a:86-411 [122556]
  4. 1y2b
    automatically matched to d1oyna_
    complexed with dee, edo, mg, zn
    1. region b:86-411 [122557]
  5. 1xor
    complexed with mg, zar, zn
    1. chain a [115710]
    2. chain b [115711]
  6. 1xom
    complexed with cio, edo, mg, zn
    1. chain a [115704]
    2. chain b [115705]
  7. 1tb7
    complexed with amp, b3p, edo, mg, zn
    1. chain a [106739]
    2. chain b [106740]
  8. 1tbb
    complexed with edo, mg, rol, zn
    1. chain a [106741]
    2. chain b [106742]
  9. 1y2d
    automatically matched to d1oyna_
    complexed with 4de, b3p, edo, mg, zn
    1. region a:86-411 [122560]
  10. 1y2d
    automatically matched to d1oyna_
    complexed with 4de, b3p, edo, mg, zn
    1. region b:86-411 [122561]
  11. 1y2c
    automatically matched to d1oyna_
    complexed with 3de, edo, mg, zn
    1. region a:86-411 [122558]
  12. 1y2c
    automatically matched to d1oyna_
    complexed with 3de, edo, mg, zn
    1. region b:86-411 [122559]
  13. 1xon
    complexed with b3p, edo, mg, pil, zn
    1. chain a [115706]
    2. chain b [115707]
  14. 2qyn
    automatically matched to d1oyna_
    complexed with mg, npv, zn
    1. region a:86-411 [151475]
  15. 2qyn
    automatically matched to d1oyna_
    complexed with mg, npv, zn
    1. region b:88-411 [151476]
  16. 1xoq
    complexed with edo, mg, rof, zn
    1. chain a [115708]
    2. chain b [115709]
  17. 2qyl
    automatically matched to d1oyna_
    complexed with mg, npv, zn
    1. region a:153-485 [151474]
  18. 1y2e
    automatically matched to d1oyna_
    complexed with 5de, edo, mg, zn
    1. region a:86-411 [122562]
  19. 1y2e
    automatically matched to d1oyna_
    complexed with 5de, edo, mg, zn
    1. region b:88-411 [122563]
  20. 2fm0
    automatically matched to d1oyna_
    complexed with m98, mg, zn
    1. region a:79-412 [133752]
  21. 2fm0
    automatically matched to d1oyna_
    complexed with m98, mg, zn
    1. region b:86-412 [133753]
  22. 2fm0
    automatically matched to d1oyna_
    complexed with m98, mg, zn
    1. region c:86-412 [133754]
  23. 2fm0
    automatically matched to d1oyna_
    complexed with m98, mg, zn
    1. region d:79-412 [133755]
  24. 2fm5
    automatically matched to d1oyna_
    complexed with m99, mg, zn
    1. region a:79-412 [133761]
  25. 2fm5
    automatically matched to d1oyna_
    complexed with m99, mg, zn
    1. region b:86-412 [133762]
  26. 2fm5
    automatically matched to d1oyna_
    complexed with m99, mg, zn
    1. region c:86-412 [133763]
  27. 2fm5
    automatically matched to d1oyna_
    complexed with m99, mg, zn
    1. region d:79-412 [133764]
  28. 1oyn
    complexed with rol, zn
    1. chain a [87609]
    2. chain b [87610]
    3. chain c [87611]
    4. chain d [87612]
  29. 1zkn
    automatically matched to d1oyna_
    complexed with ibm, mg, zn
    1. region a:79-412 [125201]
  30. 1zkn
    automatically matched to d1oyna_
    complexed with ibm, mg, zn
    1. region b:86-412 [125202]
  31. 1zkn
    automatically matched to d1oyna_
    complexed with ibm, mg, zn
    1. region c:83-412 [125203]
  32. 1zkn
    automatically matched to d1oyna_
    complexed with ibm, mg, zn
    1. region d:79-412 [125204]
  33. 1q9m
    complexed with rol, zn
    1. chain a [96288]
    2. chain b [96289]
    3. chain c [96290]
    4. chain d [96291]
  34. 1ptw
    complexed with amp, zn
    1. chain a [95106]
    2. chain b [95107]
    3. chain c [95108]
    4. chain d [95109]
  35. 1y2h
    automatically matched to d1mkda_
    complexed with 6de, mg, zn
    1. region a:163-485 [122567]
  36. 1y2h
    automatically matched to d1mkda_
    complexed with 6de, mg, zn
    1. region b:163-485 [122568]
  37. 1mkd
    complexed with mg, zar, zn
    1. chain a [84982]
    2. chain b [84983]
    3. chain c [84984]
    4. chain d [84985]
    5. chain e [84986]
    6. chain f [84987]
    7. chain g [84988]
    8. chain h [84989]
    9. chain i [84990]
    10. chain j [84991]
    11. chain k [84992]
    12. chain l [84993]
  38. 1y2j
    automatically matched to d1mkda_
    complexed with 7de, mg, zn
    1. region a:163-485 [122569]
  39. 1y2j
    automatically matched to d1mkda_
    complexed with 7de, mg, zn
    1. region b:163-485 [122570]
cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx [101439]
1. Human (Homo sapiens) [TaxId: 9606] [101440] (18)
  SQ O76074 534-860
  1. 1tbf
    complexed with gol, mg, via, zn
    1. chain a [106743]
  2. 1xoz
    complexed with cia, mg, zn
    1. chain a [115719]
  3. 2chm
    complexed with 3p4, mes, mg, zn
    1. region a:537-858 [130472]
  4. 1xp0
    complexed with mg, vdn, zn
    1. chain a [115720]
  5. 2h44
    automatically matched to d1t9ra_
    complexed with 7ca, mg, zn
    1. region a:535-860 [136069]
  6. 2h40
    automatically matched to d1t9ra_
    complexed with mg, zn
    1. region a:535-860 [136063]
  7. 1t9s
    complexed with 5gp, mg, zn
    1. chain a [106726]
    2. chain b [106727]
  8. 3bjc
    automatically matched to d1t9ra_
    complexed with mg, wan, zn
    1. region a:535-860 [155329]
  9. 3b2r
    automatically matched to d1t9ra_
    complexed with vdn
    1. region a:535-860 [154768]
  10. 3b2r
    automatically matched to d1t9ra_
    complexed with vdn
    1. region b:538-860 [154769]
  11. 1rkp
    complexed with ibm, mg, zn; mutant
    1. chain a [97620]
  12. 1t9r
    complexed with cit, po4, zn
    1. chain a [106725]
  13. 2h42
    automatically matched to d1t9ra_
    complexed with mg, via, zn
    1. region a:535-860 [136064]
  14. 2h42
    automatically matched to d1t9ra_
    complexed with mg, via, zn
    1. region b:535-860 [136065]
  15. 2h42
    automatically matched to d1t9ra_
    complexed with mg, via, zn
    1. region c:535-860 [136066]
  16. 1udt
    complexed with mg, via, zn
    1. chain a [99221]
  17. 1uho
    complexed with mg, vdn, zn
    1. chain a [107851]
  18. 1udu
    complexed with cia, mg, zn
    1. chain a [99222]
    2. chain b [99223]
cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b [101441]
1. Human (Homo sapiens) [TaxId: 9606] [101442] (2)
  1. 1so2
    complexed with 666, hg9, mg
    1. chain a [98936]
    2. chain b [98937]
    3. chain c [98938]
    4. chain d [98939]
  2. 1soj
    complexed with ibm, mg
    1. chain a [98942]
    2. chain b [98943]
    3. chain c [98944]
    4. chain d [98945]
    5. chain e [98946]
    6. chain f [98947]
    7. chain g [98948]
    8. chain h [98949]
    9. chain i [98950]
    10. chain j [98951]
    11. chain k [98952]
    12. chain l [98953]
High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A [109942]
1. Human (Homo sapiens) [TaxId: 9606] [109943] (14)
  SQ O76083 241-566
  1. 3dy8
    automatically matched to d2hd1a1
    complexed with 5gp, fmt, ibm, mg, mn
    1. region a:182-505 [157937]
  2. 3dy8
    automatically matched to d2hd1a1
    complexed with 5gp, fmt, ibm, mg, mn
    1. region b:182-505 [157938]
  3. 3dyn
    automatically matched to d2hd1a1
    complexed with ibm, mg, pcg, zn
    1. region a:182-505 [157942]
  4. 3dyn
    automatically matched to d2hd1a1
    complexed with ibm, mg, pcg, zn
    1. region b:182-505 [157943]
  5. 3dys
    automatically matched to d2hd1a1
    complexed with 5gp, fmt, ibm, mg, mn
    1. region a:182-505 [157946]
  6. 3dys
    automatically matched to d2hd1a1
    complexed with 5gp, fmt, ibm, mg, mn
    1. region b:182-505 [157947]
  7. 2hd1
    automatically matched to d1tbma_
    complexed with ibm, mg, zn
    1. region a:181-506 [136338]
  8. 2hd1
    automatically matched to d1tbma_
    complexed with ibm, mg, zn
    1. region b:181-506 [136339]
  9. 3dyq
    automatically matched to d2hd1a1
    complexed with ibm, na, pcg
    1. region a:182-505 [157944]
  10. 3dyq
    automatically matched to d2hd1a1
    complexed with ibm, na, pcg
    1. region b:182-505 [157945]
  11. 3dyl
    automatically matched to d2hd1a1
    complexed with fmt, ibm, mg, mn, pcg
    1. region a:182-505 [157940]
  12. 3dyl
    automatically matched to d2hd1a1
    complexed with fmt, ibm, mg, mn, pcg
    1. region b:182-505 [157941]
  13. 2yy2
    automatically matched to d2hd1a1
    complexed with ibm, mg, zn
    1. region a:181-506 [153829]
  14. 2yy2
    automatically matched to d2hd1a1
    complexed with ibm, mg, zn
    1. region b:181-504 [153830]
Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B [109944]
1. Human (Homo sapiens) [TaxId: 9606] [109945] (1)
  SQ Q01064 126-482
  1. 1taz
    complexed with mg, zn
    1. chain a [106734]