Structural Classification of Proteins
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Family: Cryptochrome/photolyase FAD-binding domain

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Cryptochrome/photolyase FAD-binding domain [48172]
    multihelical; consists of two all-alpha subdomains
  4. Superfamily: Cryptochrome/photolyase FAD-binding domain [48173]
    link to SUPERFAMILY database - Superfamily
  5. Family: Cryptochrome/photolyase FAD-binding domain [48174]

Protein Domains:

  1. C-terminal domain of DNA photolyase [48175]
    N-terminal domain is alpha/beta and binds a light-harvesting cofactor
    1. Escherichia coli [TaxId: 562] [48176] (1)
      1. 1dnp picpicxref
        complexed with fad, mhf
        1. region a:201-469 [18775] picpiclink
        2. region b:201-469 [18776] picpiclink
    2. Thermus thermophilus [TaxId: 274] [69083] (5)
      1. 2j07 picpicxref
        automatically matched to d1iqra1
        complexed with cl, fad, hdf, po4
        1. region a:172-405 [137891] picpiclink
      2. 2j09 picpicxref
        automatically matched to d1iqra1
        complexed with cl, fad, fmn, po4
        1. region a:172-405 [137895] picpiclink
      3. 1iqr picpicxref
        complexed with fad, po4
        1. region a:172-416 [66275] picpiclink
      4. 1iqu picpicxref
        complexed with thymine
        complexed with fad, po4, tdr
        1. region a:172-416 [71280] picpiclink
      5. 2j08 picpicxref
        automatically matched to d1iqra1
        complexed with cl, fad, irf, po4
        1. region a:172-405 [137893] picpiclink
    3. Synechococcus elongatus [TaxId: 32046] [48177] (7)
      SQ P05327 1-474
      1. 1owl picpicxref
        complexed with fad, po4
        1. region a:205-475 [93647] picpiclink
      2. 1tez picpicxref
        complexed with fad, hdf, mg, tcp
        1. region a:205-475 [112409] picpiclink
        2. region b:205-475 [112411] picpiclink
        3. region c:205-475 [112413] picpiclink
        4. region d:205-475 [112415] picpiclink
      3. 1qnf picpicxref
        complexed with fad, hdf
        1. region a:205-475 [18777] picpiclink
      4. 1owp picpicxref
        complexed with fad, po4
        1. region a:205-475 [93655] picpiclink
      5. 1own picpicxref
        complexed with fad, po4
        1. region a:205-475 [93651] picpiclink
      6. 1owo picpicxref
        complexed with fad, po4
        1. region a:205-475 [93653] picpiclink
      7. 1owm picpicxref
        complexed with fad, po4
        1. region a:205-475 [93649] picpiclink
  2. Cryptochrome C-terminal domain [81841]
    1. Synechocystis sp., pcc 6803 [TaxId: 1143] [81842] (1)
      1. 1np7 picpicxref
        complexed with fad, so4
        1. region a:205-483 [80677] picpiclink
        2. region b:205-483 [80679] picpiclink
    2. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [109947] (2)
      SQ Q43125 13-497
      1. 1u3d picpicxref
        complexed with anp, cl, fad, mg, nds
        1. region a:198-497 [107638] picpiclink
      2. 1u3c picpicxref
        complexed with cl, fad, hez, mg, nds
        1. region a:198-497 [107636] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk