Structural Classification of Proteins
Fold: Long alpha-hairpin
2 helices; antiparallel hairpin, left-handed twist
Lineage:
Root:
scop
Class:
All alpha proteins
[46456]
Fold:
Long alpha-hairpin
[46556]
2 helices; antiparallel hairpin, left-handed twist
Superfamilies:
GreA transcript cleavage protein, N-terminal domain
[46557] (1)
uperfamily
GreA transcript cleavage protein, N-terminal domain
[46558] (3)
GreA transcript cleavage protein, N-terminal domain [46559]
C-terminal domain is FKBP-like
Escherichia coli
[TaxId: 562]
[46560] (1)
1grj
region a:2-79
[15691]
Thermus aquaticus
[TaxId: 271]
[140098] (3)
SQ
Q8VQD7
3-77
2etn
region a:3-77
[132365]
2etn
automatically matched to 2ETN A:3-77
region b:3-77
[132367]
2etn
automatically matched to 2ETN A:3-77
region c:3-77
[132369]
Thermus thermophilus
[TaxId: 274]
[140099] (6)
SQ
Q5SJG6
1-77! SQ
Q72JT8
3-77
2f23
region a:3-77
[132797]
2f23
automatically matched to 2F23 A:3-77
region b:3-77
[132799]
2eul
complexed with zn
region a:1-77
[132392]
2eul
automatically matched to 2EUL A:1-77
complexed with zn
region b:1-77
[132394]
2eul
automatically matched to 2EUL A:1-77
complexed with zn
region c:1-77
[132396]
2eul
automatically matched to 2EUL A:1-77
complexed with zn
region d:1-77
[132398]
Ribosomal protein L29 (L29p)
[46561] (1)
uperfamily
Ribosomal protein L29 (L29p)
[46562] (5)
Ribosomal protein L29 (L29p) [46563]
Archaeon Haloarcula marismortui
[TaxId: 2238]
[46564] (44)
SQ
P10971
1vqo
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
region v:1-65
[120383]
1vq8
automatically matched to d1ffks_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region v:1-65
[120209]
1vqp
automatically matched to d1ffks_
complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region v:1-65
[120412]
1jj2
complexed with cd, cl, k, mg, na
chain u
[63106]
1yhq
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
region v:1-65
[123204]
1vql
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
region v:1-65
[120296]
1vqk
automatically matched to d1ffks_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
region v:1-65
[120267]
1s72
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
chain v
[105341]
1vqm
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
region v:1-65
[120325]
1vqn
automatically matched to d1ffks_
complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
region v:1-65
[120354]
1yi2
automatically matched to d1ffks_
complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
region v:1-65
[123251]
1yij
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
region v:1-65
[123319]
1vq7
automatically matched to d1ffks_
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
region v:1-65
[120180]
1vq4
automatically matched to d1ffks_
complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
region v:1-65
[120093]
2otl
automatically matched to d1ffks_
complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
region v:1-65
[139367]
1vq5
automatically matched to d1ffks_
complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
region v:1-65
[120122]
1vq9
automatically matched to d1ffks_
complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
region v:1-65
[120238]
1m90
complexed with aca, cd, cl, k, mg, na, pha, sps
chain w
[78861]
1yit
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
region v:1-65
[123362]
1vq6
automatically matched to d1ffks_
complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
region v:1-65
[120151]
2otj
automatically matched to d1ffks_
complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
region v:1-65
[139338]
1yjw
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
region v:1-65
[123486]
1nji
complexed with cd, cl, clm, k, mg, na; mutant
chain w
[85814]
1kqs
complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
chain u
[68836]
1kc8
complexed with bls, cd, cl, k, mg, na
chain w
[84378]
1yjn
automatically matched to d1ffks_
complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
region v:1-65
[123454]
1n8r
complexed with cd, cl, k, mg, na, vir; mutant
chain w
[85450]
1k73
complexed with anm, cd, cl, k, mg, na
chain w
[84339]
1yj9
automatically matched to d1ffks_
complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
region v:1-65
[123414]
1qvg
complexed with cd, cl, k, mg, na
chain u
[96413]
1q82
complexed with cd, cl, k, mg, na, ppu
chain w
[96150]
1qvf
complexed with cd, cl, k, mg, na
chain u
[96383]
1q81
complexed with cd, cl, k, mg, na, ppu
chain w
[96120]
1k9m
complexed with cd, cl, k, mg, na, tyk
chain w
[72234]
1kd1
complexed with cd, cl, k, mg, na, spr
chain w
[72345]
1k8a
complexed with cai, cd, cl, k, mg, na
chain w
[72167]
1m1k
complexed with cd, cl, k, mg, na, zit
chain w
[74405]
1q86
complexed with cd, cl, k, mg, na, pha
chain w
[96188]
1q7y
complexed with cd, cl, k, mg, na, po4, puy
chain w
[96086]
1ffk
complexed with cd, k, mo3; mutant
chain s
[15692]
1yl3
automatically matched to d1ffks_
region w:1-65
[123594]
2b66
automatically matched to d1ffks_
region 2:1-65
[127954]
2b9n
automatically matched to d1ffks_
region 2:1-65
[128146]
2b9p
automatically matched to d1ffks_
region 2:1-65
[128183]
Thermotoga maritima
[TaxId: 2336]
[109630] (1)
SQ
P38514
1r73
Structural genomics target
chain a
[104827]
Thermus thermophilus
[TaxId: 274]
[140100] (6)
SQ
Q5SHP6
12-62
2j01
region 2:12-62
[137860]
2j03
automatically matched to 2J01 2:12-62
complexed with lys
region 2:12-62
[137886]
2hgq
automatically matched to 2HGJ 1:1-67
region 1:1-67
[145329]
1vsa
automatically matched to 2J01 2:12-62
region w:12-62
[120519]
2hgj
region 1:1-67
[145297]
2hgu
automatically matched to 2HGJ 1:1-67
region 1:1-67
[145361]
Escherichia coli
[TaxId: 562]
[140101] (30)
SQ
P0A7M6
1-63
2gyc
automatically matched to 2AW4 X:1-63
region w:1-60
[135855]
2gya
automatically matched to 2AW4 X:1-63
region w:1-60
[135843]
2qam
automatically matched to d1vs6x1
complexed with mg, nmy, zn
region x:1-63
[150264]
2qao
automatically matched to d1vs6x1
complexed with mg, nmy, zn
region x:1-63
[150317]
2i2t
automatically matched to 2AW4 X:1-63
complexed with mg, zn
region y:1-63
[137005]
2i2v
automatically matched to 2AW4 X:1-63
complexed with mg, zn
region y:1-63
[137018]
2qbe
automatically matched to d1vs6x1
complexed with mg, zn
region x:1-63
[150484]
2qbg
automatically matched to d1vs6x1
complexed with mg, zn
region x:1-63
[150538]
2qoz
automatically matched to d1vs6x1
complexed with mg, nmy, zn
region x:1-63
[151140]
2qp1
automatically matched to d1vs6x1
complexed with mg, nmy, zn
region x:1-63
[151193]
3df2
automatically matched to d1vs6x1
complexed with mg, zn
region x:1-63
[157653]
3df4
automatically matched to d1vs6x1
complexed with mg, zn
region x:1-63
[157707]
2qba
automatically matched to d1vs6x1
complexed with lll, mg, zn
region x:1-63
[150377]
2qbc
automatically matched to d1vs6x1
complexed with lll, mg, zn
region x:1-63
[150430]
2qbi
automatically matched to d1vs6x1
complexed with lll, mg, zn
region x:1-63
[150592]
2qbk
automatically matched to d1vs6x1
complexed with lll, mg, zn
region x:1-63
[150646]
2qov
automatically matched to d1vs6x1
complexed with mg, zn
region x:1-63
[151034]
2qox
automatically matched to d1vs6x1
complexed with mg, zn
region x:1-63
[151087]
1vs6
automatically matched to 2AW4 X:1-63
complexed with mg
region x:1-63
[120501]
1vs8
automatically matched to 2AW4 X:1-63
complexed with mg
region x:1-63
[120515]
2aw4
complexed with mg
region x:1-63
[127406]
2awb
automatically matched to 2AW4 X:1-63
complexed with mg
region x:1-63
[127428]
2z4l
automatically matched to d1vs6x1
complexed with mg, par, zn
region x:1-63
[154102]
2z4n
automatically matched to d1vs6x1
complexed with mg, par, zn
region x:1-63
[154156]
2vhm
automatically matched to d1vs6x1
complexed with mg; mutant
region x:1-63
[153087]
2vhn
automatically matched to d1vs6x1
complexed with mg
region x:1-63
[153119]
2rdo
automatically matched to d1vs6x1
region x:1-63
[151964]
2vrh
automatically matched to d1vs6x1
region d:1-63
[153511]
2j28
automatically matched to 2AW4 X:1-63
complexed with mg
region x:1-63
[137970]
3bbx
automatically matched to d1vs6x1
complexed with mg
region x:1-63
[155121]
Deinococcus radiodurans
[TaxId: 1299]
[158220] (8)
SQ
Q9RXJ4
1-66
2zjr
Representative structure
complexed with mg
region v:1-66
[154575]
2aar
automatically matched to 2ZJR V:1-66
region w:2-66
[146044]
1xbp
automatically matched to 2ZJR V:1-66
complexed with mul
region w:2-66
[145887]
2zjq
automatically matched to 2ZJR V:1-66
region v:1-66
[154546]
3cf5
automatically matched to 2ZJR V:1-66
complexed with mg, txx
region v:1-66
[156562]
2d3o
automatically matched to 2ZJR V:1-66
region w:1-66
[146453]
2zjp
automatically matched to 2ZJR V:1-66
complexed with mg, nsh, zn
region v:1-66
[154514]
3dll
automatically matched to 2ZJR V:1-66
complexed with mg, zld, zn
region v:1-66
[157799]
Chaperone J-domain
[46565] (1)
uperfamily
Chaperone J-domain
[46566] (8)
Pfam 00226
HSC20 (HSCB), N-terminal (J) domain [46567]
Escherichia coli
[TaxId: 562]
[46568] (1)
1fpo
mutant
region a:1-76
[15693]
region b:1-76
[15694]
region c:1-76
[15695]
HSP40 [46569]
Human (Homo sapiens)
[TaxId: 9606]
[46570] (1)
1hdj
chain a
[15696]
DnaJ chaperone, N-terminal (J) domain [46571]
Escherichia coli
[TaxId: 562]
[46572] (3)
1xbl
chain a
[15697]
1bq0
chain a
[15698]
1bqz
chain a
[15699]
Auxilin J-domain [88969]
Cow (Bos taurus)
[TaxId: 9913]
[88970] (2)
1nz6
complexed with mse
chain a
[86441]
chain b
[86442]
1n4c
includes unstructured clathrin substrate binding region; residues 1-70
chain a
[91617]
Hypothetical protein KIAA0730 [100982]
Human (Homo sapiens)
[TaxId: 9606]
[100983] (1)
structural genomics
1iur
chain a
[90704]
Large T antigen, the N-terminal J domain [46573]
Murine polyomavirus
[TaxId: 10634]
[46574] (1)
1faf
chain a
[15700]
Simian virus 40, Sv40
[TaxId: 10633]
[68943] (1)
1gh6
extended at the C-terminus
chain a
[65191]
CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) [116760]
Mouse (Mus musculus)
[TaxId: 10090]
[116761] (1)
SQ
Q91ZF0
49-129
1wjz
Structural genomics target
chain a
[114717]
Prefoldin
[46579] (1)
uperfamily
Prefoldin
[46580] (2)
contains one or two beta-hairpins at the tip of alpha-hairpin
Prefoldin alpha subunit [46581]
Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]
[46582] (1)
1fxk
chain c
[15702]
Prefoldin beta subunit [46583]
Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]
[46584] (1)
1fxk
chain a
[15703]
chain b
[15704]
HR1 repeat
[46585] (1)
uperfamily
HR1 repeat
[46586] (1)
protein kinase effector domain
Protein kinase c-like 1, pkn/prk1 [46587]
Human (Homo sapiens)
[TaxId: 9606]
[46588] (3)
1cxz
first HR1 domain complexed with RhoA
complexed with gsp, mg; mutant
chain b
[15705]
1urf
second HR1 domain
chain a
[99827]
2rmk
automatically matched to d1urfa_
complexed with gcp, mg; mutant
region b:119-199
[152167]
tRNA-binding arm
[46589] (4)
formerly a class II aminoacyl-tRNA synthetase N-domain
uperfamily
Seryl-tRNA synthetase (SerRS)
[46590] (1)
Seryl-tRNA synthetase (SerRS) [46591]
Thermus thermophilus, strain hb27
[TaxId: 274]
[46592] (4)
1set
complexed with ssa
region a:1-110
[15708]
region b:1-110
[15709]
1sry
region a:1-110
[15706]
region b:1-110
[15707]
1ses
complexed with ahx, amp
region a:1-110
[15710]
region b:1-110
[15711]
1ser
complexed with dhu
region a:1-110
[15712]
region b:501-610
[15713]
Phenylalanyl-tRNA synthetase (PheRS)
[46593] (1)
Phenylalanyl-tRNA synthetase (PheRS) [46594]
Thermus thermophilus
[TaxId: 274]
[46595] (2)
2iy5
automatically matched to d1eiya1
complexed with fya, mg
region a:15-84
[137792]
1eiy
region a:6-84
[15714]
Valyl-tRNA synthetase (ValRS) C-terminal domain
[81635] (1)
Valyl-tRNA synthetase (ValRS) C-terminal domain [81634]
Thermus thermophilus
[TaxId: 274]
[81633] (3)
1ivs
complexed with vaa
region a:797-862
[76855]
region b:797-862
[76859]
1gax
protein/RNA complex; complexed with vaa, zn
region a:797-862
[75842]
region b:797-862
[75844]
1iyw
preliminary structure of ligand-free enzyme; CA-atoms only
region a:797-862
[83807]
region b:797-862
[83811]
Methicillin resistance protein FemA probable tRNA-binding arm
[81671] (1)
inserted in the C-terminal NAT-like domain
Methicillin resistance protein FemA probable tRNA-binding arm [81672]
proposed to bind tRNA-Gly
Staphylococcus aureus
[TaxId: 1280]
[81673] (1)
1lrz
region a:245-309
[78167]
Eukaryotic DNA topoisomerase I, dispensable insert domain
[46596] (1)
uperfamily
Eukaryotic DNA topoisomerase I, dispensable insert domain
[46597] (1)
Eukaryotic DNA topoisomerase I, dispensable insert domain [46598]
Human (Homo sapiens)
[TaxId: 9606]
[46599] (9)
SQ
P11387
203-767
1k4t
complexed with hg, pg4, ptr, tgp, ttc, ttg
region a:641-712
[77263]
1rrj
complexed with ttc, ttg; mutant
region a:636-712
[105078]
1a36
protein/DNA complex; mutant
region a:641-712
[15715]
1sc7
automatically matched to d1rrja1
complexed with m38, pg4, tgp
region a:636-712
[118944]
1seu
automatically matched to d1rrja1
complexed with sa3, tgp; mutant
region a:636-712
[118952]
1tl8
automatically matched to d1rrja1
complexed with ai3, tpc
region a:636-712
[119299]
1t8i
automatically matched to d1rrja1
complexed with ehd, tgp
region a:636-712
[119172]
1lpq
complexed with 8og; mutant
region a:641-712
[74174]
1r49
mutant
region a:644-713
[96983]
C-terminal UvrC-binding domain of UvrB
[46600] (1)
uperfamily
C-terminal UvrC-binding domain of UvrB
[46601] (1)
C-terminal UvrC-binding domain of UvrB [46602]
Escherichia coli
[TaxId: 562]
[46603] (2)
1qoj
chain a
[15716]
chain b
[15717]
1e52
chain a
[59256]
chain b
[59257]
Epsilon subunit of F1F0-ATP synthase C-terminal domain
[46604] (1)
uperfamily
Epsilon subunit of F1F0-ATP synthase C-terminal domain
[46605] (2)
Epsilon subunit of F1F0-ATP synthase C-terminal domain [46606]
delta subunit in mitochondria
this domain unfolds when bound to the gamma subunit
Escherichia coli
[TaxId: 562]
[46607] (4)
1aqt
mutant
region a:87-136
[15718]
1bsn
region a:87-138
[15719]
1bsh
region a:87-138
[15720]
1fs0
region e:87-134
[59997]
Cow (Bos taurus)
[TaxId: 9913]
[46608] (4)
2jdi
automatically matched to d1e79h1
complexed with anp, mg
region h:102-145
[138273]
2ck3
automatically matched to d1e79h1
complexed with adp, anp, azi, mg, po4
region h:102-140
[130563]
2v7q
automatically matched to d1e79h1
complexed with adp, atp, mg, po4
region h:102-145
[152733]
1e79
complexed with adp, atp, cry, glh, mg, so4
region h:101-145
[15721]
Fe,Mn superoxide dismutase (SOD), N-terminal domain
[46609] (1)
uperfamily
Fe,Mn superoxide dismutase (SOD), N-terminal domain
[46610] (19)
Fe superoxide dismutase (FeSOD) [46611]
Mycobacterium tuberculosis
[TaxId: 1773]
[46612] (5)
1ids
complexed with fe; mutant
region a:2-85
[15722]
region b:2-85
[15723]
region c:2-85
[15724]
region d:2-85
[15725]
1gn6
complexed with fe; mutant
region a:2-85
[65387]
region b:2-85
[65389]
region c:2-85
[65391]
region d:2-85
[65393]
1gn4
complexed with mn; mutant
region a:2-85
[65379]
region b:2-85
[65381]
region c:2-85
[65383]
region d:2-85
[65385]
1gn3
complexed with fe; mutant
region a:2-85
[65375]
region b:2-85
[65377]
1gn2
complexed with fe; mutant
region a:2-85
[65359]
region b:2-85
[65361]
region c:2-85
[65363]
region d:2-85
[65365]
region e:2-85
[65367]
region f:2-85
[65369]
region g:2-85
[65371]
region h:2-85
[65373]
Pseudomonas ovalis
[TaxId: 303]
[46613] (2)
1dt0
complexed with fe; mutant
region a:1-83
[15726]
region b:1-83
[15727]
region c:1-83
[15728]
3sdp
complexed with fe; mutant
region a:5-83
[15729]
region b:5-83
[15730]
Escherichia coli
[TaxId: 562]
[46614] (13)
2nyb
automatically matched to d1isaa1
complexed with fe2, o; mutant
region a:1-82
[138804]
2nyb
automatically matched to d1isaa1
complexed with fe2, o; mutant
region b:1-82
[138806]
2nyb
automatically matched to d1isaa1
complexed with fe2, o; mutant
region c:1-82
[138808]
2nyb
automatically matched to d1isaa1
complexed with fe2, o; mutant
region d:1-82
[138810]
2bkb
automatically matched to d1isaa1
complexed with fe2; mutant
region a:1-82
[128667]
2bkb
automatically matched to d1isaa1
complexed with fe2; mutant
region b:201-282
[128669]
2bkb
automatically matched to d1isaa1
complexed with fe2; mutant
region c:1-82
[128671]
2bkb
automatically matched to d1isaa1
complexed with fe2; mutant
region d:201-282
[128673]
1isc
complexed with azi, fe; mutant
region a:1-82
[15733]
region b:1-82
[15734]
1isa
complexed with fe2; mutant
region a:1-82
[15731]
region b:1-82
[15732]
1isb
complexed with fe; mutant
region a:1-82
[15735]
region b:1-82
[15736]
1za5
automatically matched to d1isaa1
complexed with fe, trs; mutant
region a:1-82
[124802]
1za5
automatically matched to d1isaa1
complexed with fe, trs; mutant
region b:201-282
[124804]
Thermosynechococcus elongatus
[TaxId: 146786]
[88971] (1)
1my6
complexed with fe; mutant
region a:1-88
[85232]
region b:1-88
[85234]
Aquifex pyrophilus
[TaxId: 2714]
[46615] (1)
1coj
complexed with fe; mutant
region a:2-90
[15737]
Archaeon Sulfolobus solfataricus
[TaxId: 2287]
[46616] (2)
SQ
P80857
1wb8
complexed with fe, pms
region a:4-92
[114482]
region b:4-92
[114484]
1wb7
complexed with fe; mutant
region a:4-92
[114478]
region b:4-92
[114480]
Archaeon Sulfolobus acidocaldarius
[TaxId: 2285]
[46617] (1)
1b06
region a:3-92
[15740]
region b:3-92
[15741]
region c:3-92
[15742]
region d:3-92
[15743]
region e:3-92
[15744]
region f:3-92
[15745]
Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]
[74664] (1)
1ma1
complexed with of1; mutant
region a:4-91
[74609]
region b:4-91
[74611]
region c:4-91
[74613]
region d:4-91
[74615]
region e:4-91
[74617]
region f:4-91
[74619]
Archaeon Pyrobaculum aerophilum
[TaxId: 13773]
[100984] (1)
1p7g
complexed with act, bme
region a:12-103
[94223]
region b:12-103
[94225]
region c:12-103
[94227]
region d:12-103
[94229]
region e:12-103
[94231]
region f:12-103
[94233]
region g:12-103
[94235]
region h:12-103
[94237]
region i:12-103
[94239]
region j:12-103
[94241]
region k:12-103
[94243]
region l:12-103
[94245]
region m:12-103
[94247]
region n:12-103
[94249]
region o:12-103
[94251]
region p:12-103
[94253]
region q:12-103
[94255]
region r:12-103
[94257]
region s:12-103
[94259]
region t:12-103
[94261]
region u:12-103
[94263]
region v:12-103
[94265]
region w:12-103
[94267]
region x:12-103
[94269]
Cowpea (Vigna unguiculata)
[TaxId: 3917]
[116762] (1)
SQ
Q9M7R2
21-245
1unf
complexed with fe
region x:14-104
[113314]
Mn superoxide dismutase (MnSOD) [46618]
Human (Homo sapiens)
[TaxId: 9606]
[46619] (44)
2p4k
automatically matched to d1ap5a1
complexed with mn; mutant
region a:1-83
[139487]
2p4k
automatically matched to d1ap5a1
complexed with mn; mutant
region b:1-83
[139489]
2p4k
automatically matched to d1ap5a1
complexed with mn; mutant
region c:1-83
[139491]
2p4k
automatically matched to d1ap5a1
complexed with mn; mutant
region d:1-83
[139493]
1xil
automatically matched to d1ap5a1
complexed with mn, yof; mutant
region a:1-83
[122014]
1xil
automatically matched to d1ap5a1
complexed with mn, yof; mutant
region b:1-83
[122016]
1pl4
complexed with mn; mutant
region a:1-83
[94854]
region b:1-83
[94856]
region c:1-83
[94858]
region d:1-83
[94860]
1pm9
complexed with mn3; mutant
region a:1-83
[94897]
region b:1-83
[94899]
1zte
automatically matched to d1ap5a1
complexed with mn; mutant
region a:1-83
[125641]
1zte
automatically matched to d1ap5a1
complexed with mn; mutant
region b:1-83
[125643]
1zte
automatically matched to d1ap5a1
complexed with mn; mutant
region c:1-83
[125645]
1zte
automatically matched to d1ap5a1
complexed with mn; mutant
region d:1-83
[125647]
1xdc
automatically matched to d1em1a1
complexed with mn, yof
region a:1-83
[121864]
1xdc
automatically matched to d1em1a1
complexed with mn, yof
region b:1-83
[121866]
1ap6
complexed with mn; mutant
region a:1-83
[15746]
region b:1-83
[15747]
1n0n
complexed with mn, so4; mutant
region a:1-83
[79750]
region b:1-83
[79752]
1zsp
automatically matched to d1ap5a1
complexed with mn; mutant
region a:1-83
[125612]
1zsp
automatically matched to d1ap5a1
complexed with mn; mutant
region b:1-83
[125614]
2qka
automatically matched to d1em1a1
complexed with mn; mutant
region a:1-83
[150839]
2qka
automatically matched to d1em1a1
complexed with mn; mutant
region c:1-83
[150841]
1szx
complexed with mw1; mutant
region a:1-83
[99049]
region b:1-83
[99051]
3c3t
automatically matched to d1ap5a1
complexed with mn, so4; mutant
region a:1-83
[155919]
3c3t
automatically matched to d1ap5a1
complexed with mn, so4; mutant
region b:1-83
[155921]
1luv
complexed with mn; mutant
region a:1-83
[74263]
region b:1-83
[74265]
1zuq
automatically matched to d1ap5a1
complexed with mn; mutant
region a:1-83
[125683]
1zuq
automatically matched to d1ap5a1
complexed with mn; mutant
region b:1-83
[125685]
1n0j
complexed with mn; mutant
region a:1-83
[79740]
region b:1-83
[79742]
1ja8
complexed with mn, so4; mutant
region a:1-83
[62813]
region b:1-83
[62815]
1em1
complexed with mw1, so4; mutant
region a:1-83
[15752]
region b:1-83
[15753]
2adp
automatically matched to d1em1a1
complexed with k, mn, niy
region a:1-83
[126591]
2adq
automatically matched to d1em1a1
complexed with k, mn
region b:1-83
[126593]
2qkc
automatically matched to d1em1a1
complexed with mn; mutant
region a:1-83
[150843]
2qkc
automatically matched to d1em1a1
complexed with mn; mutant
region c:1-83
[150845]
2gds
automatically matched to d1em1a1
complexed with mn; mutant
region a:1-83
[135024]
2gds
automatically matched to d1em1a1
complexed with mn; mutant
region b:1-83
[135026]
2gds
automatically matched to d1em1a1
complexed with mn; mutant
region c:1-83
[135028]
2gds
automatically matched to d1em1a1
complexed with mn; mutant
region d:1-83
[135030]
3c3s
automatically matched to d1ap5a1
complexed with mn, so4; mutant
region a:1-83
[155915]
3c3s
automatically matched to d1ap5a1
complexed with mn, so4; mutant
region b:1-83
[155917]
1ap5
complexed with mn; mutant
region a:1-83
[15750]
region b:1-83
[15751]
1qnm
complexed with mn; mutant
region a:1-83
[15754]
region b:1-83
[15755]
1var
complexed with mn3; mutant
region a:1-83
[15756]
region b:1-83
[15757]
1luw
complexed with mn, so4; mutant
region a:1-83
[74267]
region b:1-83
[74269]
1msd
complexed with mn; mutant
region a:1-83
[15758]
region b:1-83
[15759]
Aspergillus fumigatus
[TaxId: 5085]
[68944] (1)
1kkc
complexed with mn; mutant
region a:14-97
[68660]
region b:15-97
[68662]
region x:15-97
[68664]
region y:14-97
[68666]
Escherichia coli
[TaxId: 562]
[46620] (12)
1ixb
complexed with mh2; mutant
region a:1-90
[76903]
region b:1-90
[76905]
1ix9
complexed with mh3; mutant
region a:1-90
[76899]
region b:1-90
[76901]
1i0h
complexed with mw1; mutant
region a:1-90
[15760]
region b:1-90
[15761]
1zlz
automatically matched to d1d5na1
complexed with azi, mh2; mutant
region a:1-90
[125272]
1zlz
automatically matched to d1d5na1
complexed with azi, mh2; mutant
region b:1-90
[125274]
1d5n
complexed with mw2; mutant
region a:1-90
[15762]
region b:1-90
[15763]
region c:1-90
[15764]
region d:1-90
[15765]
1en4
complexed with mw1; mutant
region a:1-90
[59457]
region b:1-90
[59459]
region c:1-90
[59461]
region d:1-90
[59463]
1en6
complexed with mw1; mutant
region a:1-90
[59473]
region b:1-90
[59475]
region c:1-90
[59477]
region d:1-90
[59479]
1vew
complexed with mn, oh; mutant
region a:1-90
[15766]
region b:1-90
[15767]
region c:1-90
[15768]
region d:1-90
[15769]
1en5
complexed with mw1; mutant
region a:1-90
[59465]
region b:1-90
[59467]
region c:1-90
[59469]
region d:1-90
[59471]
1i08
complexed with mw1; mutant
region a:1-90
[15770]
region b:1-90
[15771]
region c:1-90
[15772]
region d:1-90
[15773]
1mmm
iron-substituted
complexed with fe, oh; mutant
region a:1-90
[15774]
region b:1-90
[15775]
Thermus thermophilus
[TaxId: 274]
[46621] (2)
1mng
complexed with azi, mn; mutant
region a:1-92
[15776]
region b:1-92
[15777]
3mds
complexed with mn; mutant
region a:1-92
[15778]
region b:1-92
[15779]
Bacillus halodenitrificans
[TaxId: 1482]
[74665] (1)
1jr9
complexed with mn, zn; mutant
region a:2-91
[71822]
Anabaena sp.
[TaxId: 1167]
[74666] (1)
1gv3
complexed with mn; mutant
region a:25-126
[70585]
region b:25-126
[70587]
Deinococcus radiodurans
[TaxId: 1299]
[116763] (3)
SQ
Q9RUV2
1y67
complexed with fe
region a:2-89
[116496]
region b:2-89
[116498]
region c:2-89
[116500]
region d:2-89
[116502]
2aw9
automatically matched to d1y67a1
complexed with mn
region a:2-89
[127413]
2aw9
automatically matched to d1y67a1
complexed with mn
region b:2-89
[127415]
Cambialistic superoxide dismutase [46622]
active with either Fe or Mn
Propionibacterium shermanii
[TaxId: 1752]
[46623] (6)
1bsm
complexed with fe; mutant
region a:1-86
[15780]
region b:1-86
[15781]
1bs3
complexed with f, fe; mutant
region a:1-86
[15784]
region b:1-86
[15785]
1avm
complexed with azi, fe; mutant
region a:1-86
[15782]
region b:1-86
[15783]
1ar5
complexed with fe; mutant
region a:1-86
[15786]
region b:1-86
[15787]
1ar4
complexed with mn; mutant
region a:1-86
[15788]
region b:1-86
[15789]
1bt8
complexed with fe; mutant
region a:1-86
[15790]
region b:1-86
[15791]
Porphyromonas gingivalis
[TaxId: 837]
[46624] (3)
SQ
P19665
1uer
complexed with fe
region a:1-84
[107790]
region b:201-284
[107792]
region c:401-484
[107794]
region d:601-684
[107796]
1ues
complexed with mn; mutant
region a:1-84
[107798]
region b:201-284
[107800]
region c:401-484
[107802]
region d:601-684
[107804]
1qnn
complexed with fe; mutant
region a:1-84
[15792]
region b:1-84
[15793]
region c:1-84
[15794]
region d:2-84
[15795]
Sporulation inhibitor Sda
[100985] (1)
uperfamily
Sporulation inhibitor Sda
[100986] (1)
Sporulation inhibitor Sda [100987]
Bacillus subtilis
[TaxId: 1423]
[100988] (1)
1pv0
chain a
[95141]
Transcriptional repressor TraM
[109631] (1)
similar structure to L29p (
scop_sf 46561
); contains extra short helix; forms homodimer: an open bundle
uperfamily
Transcriptional repressor TraM
[109632] (1)
Transcriptional repressor TraM [109633]
Agrobacterium tumefaciens
[TaxId: 358]
[109634] (3)
SQ
Q57471
1rfy
chain a
[111798]
chain b
[111799]
1us6
chain a
[107999]
chain b
[108000]
1upg
chain a
[107992]
chain b
[107993]
DnaK suppressor protein DksA, alpha-hairpin domain
[109635] (1)
uperfamily
DnaK suppressor protein DksA, alpha-hairpin domain
[109636] (1)
DnaK suppressor protein DksA, alpha-hairpin domain [109637]
Escherichia coli
[TaxId: 562]
[109638] (1)
SQ
P18274
7-151
1tjl
complexed with zn
region a:7-110
[107027]
region b:7-110
[107029]
region c:7-110
[107031]
region d:7-110
[107033]
region e:7-110
[107035]
region f:7-110
[107037]
region g:7-110
[107039]
region h:7-110
[107041]
region i:7-110
[107043]
region j:7-110
[107045]
ISY1 domain-like
[140102] (1)
uperfamily
ISY1 N-terminal domain-like
[140103] (1)
N-terminal region of
Pfam 06246
Pre-mRNA-splicing factor ISY1 homolog [140104]
Mouse (Mus musculus)
[TaxId: 10090]
[140105] (1)
SQ
Q69ZQ2
23-102
1x4t
region a:7-86
[121698]
Calcyclin-binding protein-like
[140106] (1)
uperfamily
Siah interacting protein N terminal domain-like
[140107] (2)
Pfam 09032
Calcyclin-binding protein, CacyBP [140108]
Human (Homo sapiens)
[TaxId: 9606]
[140109] (3)
SQ
Q9HB71
1-47
2a26
complexed with cxs, so4
region a:1-47
[126027]
2a26
automatically matched to 2A26 A:1-47
complexed with cxs, so4
region b:1-44
[126028]
2a26
automatically matched to 2A26 A:1-47
complexed with cxs, so4
region c:1-44
[126029]
Mouse (Mus musculus)
[TaxId: 10090]
[140110] (1)
SQ
Q9CXW3
1-55
1ysm
region a:1-55
[123979]
Endosomal sorting complex assembly domain
[140111] (3)
forms 'fan'-like heterooligomers, in which the domains of different subunit make similar interactions at the tip of the hairpin
uperfamily
VPS23 C-terminal domain
[140112] (1)
Vacuolar protein sorting-associated protein 23, VPS23 [140113]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[140114] (6)
SQ
P25604
322-385! SQ
P25604
325-383
2f6m
automatically matched to 2F66 A:322-385
complexed with ddq, mg; mutant
region a:322-385
[133051]
2f6m
automatically matched to 2F66 A:322-385
complexed with ddq, mg; mutant
region c:322-383
[133053]
2f66
complexed with so4; mutant
region a:322-385
[133027]
2f66
automatically matched to 2F66 A:322-385
complexed with so4; mutant
region d:322-385
[133030]
2caz
region a:325-383
[130169]
2caz
automatically matched to 2CAZ A:325-383
region d:325-383
[130172]
VPS28 N-terminal domain
[140115] (1)
includes structurally variable linker region
Vacuolar protein sorting-associated protein 28, VPS28 [140116]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[140117] (6)
SQ
Q02767
15-125! SQ
Q02767
23-123
2f6m
automatically matched to 2F66 B:15-125
complexed with ddq, mg; mutant
region b:15-118
[133052]
2f6m
automatically matched to 2F66 B:15-125
complexed with ddq, mg; mutant
region d:16-117
[133054]
2f66
complexed with so4; mutant
region b:15-125
[133028]
2f66
automatically matched to 2F66 B:15-125
complexed with so4; mutant
region e:15-125
[133031]
2caz
region b:23-123
[130170]
2caz
automatically matched to 2CAZ B:23-123
region e:23-123
[130173]
VPS37 C-terminal domain-like
[140118] (1)
Pfam 07200
; Modifier of rudimentary, Mod(r)
Vacuolar protein sorting-associated protein 37, VPS37 (SRN2) [140119]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[140120] (3)
SQ
Q99176
139-203! SQ
Q99176
142-206
2f66
complexed with so4; mutant
region c:142-206
[133029]
2f66
automatically matched to 2F66 C:142-206
complexed with so4; mutant
region f:145-206
[133032]
2caz
region c:139-203
[130171]
SPy1572-like
[140121] (1)
forms homodimer: an open bundle, different from the TRAM dimer
uperfamily
SPy1572-like
[140122] (1)
Hypothetical protein SPy1572 [140123]
Streptococcus pyogenes
[TaxId: 1314]
[140124] (1)
SQ
Q99YR7
1-77
1z0p
region a:1-77
[124325]
Rabenosyn-5 Rab-binding domain-like
[140125] (1)
uperfamily
Rabenosyn-5 Rab-binding domain-like
[140126] (1)
FYVE finger-containing Rab5 effector protein rabenosyn-5 [140127]
Human (Homo sapiens)
[TaxId: 9606]
[140128] (4)
SQ
Q9H1K0
441-501! SQ
Q9H1K0
456-501! SQ
Q9H1K0
734-784
1z0j
2nd Rab-binding domain
complexed with gol, gtp, mg, trs; mutant
region b:734-784
[124320]
1yzm
1st Rab-binding domain
region a:456-501
[124283]
1z0k
1st Rab-binding domain
complexed with gtp, mes, mg
region b:441-501
[124322]
1z0k
automatically matched to 1Z0K B:441-501
complexed with gtp, mes, mg
region d:441-501
[124324]
MxiH-like
[140129] (1)
Type III secretion system needle
uperfamily
MxiH-like
[140130] (2)
MxiH needle protein [140131]
Shigella flexneri
[TaxId: 623]
[140132] (2)
SQ
P0A223
20-78
2ca5
complexed with gol, ipa, na
region a:20-78
[130149]
2ca5
automatically matched to 2CA5 A:20-78
complexed with gol, ipa, na
region b:20-75
[130150]
BsaL needle protein [140133]
Burkholderia pseudomallei
[TaxId: 28450]
[140134] (1)
SQ
Q63K18
1-84
2g0u
region a:1-84
[134501]
YnzC-like
[158221] (1)
YznC-like
[158222] (1)
Pfam 05979
; DUF896
Hypothetical protein YnzC [158223]
Bacillus subtilis
[TaxId: 1423]
[158224] (1)
SQ
O31818
1-42
2hep
region a:1-42
[147271]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk