Structural Classification of Proteins
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Superfamily: Endosomal sorting complex assembly domain

forms 'fan'-like heterooligomers, in which the domains of different subunit make similar interactions at the tip of the hairpin
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Long alpha-hairpin [46556]
    2 helices; antiparallel hairpin, left-handed twist
  4. Superfamily: Endosomal sorting complex assembly domain [140111]
    forms 'fan'-like heterooligomers, in which the domains of different subunit make similar interactions at the tip of the hairpin
    link to SUPERFAMILY database - Superfamily

Families:

  1. VPS23 C-terminal domain [140112] (1)
    1. Vacuolar protein sorting-associated protein 23, VPS23 [140113]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140114] (6)
        SQ P25604 322-385! SQ P25604 325-383
        1. 2f6m picpicxrefxref
          automatically matched to 2F66 A:322-385
          complexed with ddq, mg; mutant
          1. region a:322-385 [133051] picpiclink
        2. 2f6m picpicxrefxref
          automatically matched to 2F66 A:322-385
          complexed with ddq, mg; mutant
          1. region c:322-383 [133053] picpiclink
        3. 2f66 picpicxrefxrefxrefxref
          complexed with so4; mutant
          1. region a:322-385 [133027] picpiclink
        4. 2f66 picpicxrefxrefxrefxref
          automatically matched to 2F66 A:322-385
          complexed with so4; mutant
          1. region d:322-385 [133030] picpiclink
        5. 2caz picpicxrefxrefxref
          1. region a:325-383 [130169] picpiclink
        6. 2caz picpicxrefxrefxref
          automatically matched to 2CAZ A:325-383
          1. region d:325-383 [130172] picpiclink
  2. VPS28 N-terminal domain [140115] (1)
    includes structurally variable linker region
    1. Vacuolar protein sorting-associated protein 28, VPS28 [140116]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140117] (6)
        SQ Q02767 15-125! SQ Q02767 23-123
        1. 2f6m picpicxrefxref
          automatically matched to 2F66 B:15-125
          complexed with ddq, mg; mutant
          1. region b:15-118 [133052] picpiclink
        2. 2f6m picpicxrefxref
          automatically matched to 2F66 B:15-125
          complexed with ddq, mg; mutant
          1. region d:16-117 [133054] picpiclink
        3. 2f66 picpicxrefxrefxrefxref
          complexed with so4; mutant
          1. region b:15-125 [133028] picpiclink
        4. 2f66 picpicxrefxrefxrefxref
          automatically matched to 2F66 B:15-125
          complexed with so4; mutant
          1. region e:15-125 [133031] picpiclink
        5. 2caz picpicxrefxrefxref
          1. region b:23-123 [130170] picpiclink
        6. 2caz picpicxrefxrefxref
          automatically matched to 2CAZ B:23-123
          1. region e:23-123 [130173] picpiclink
  3. VPS37 C-terminal domain-like [140118] (1)
    Pfam 07200; Modifier of rudimentary, Mod(r)
    1. Vacuolar protein sorting-associated protein 37, VPS37 (SRN2) [140119]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140120] (3)
        SQ Q99176 139-203! SQ Q99176 142-206
        1. 2f66 picpicxrefxrefxrefxref
          complexed with so4; mutant
          1. region c:142-206 [133029] picpiclink
        2. 2f66 picpicxrefxrefxrefxref
          automatically matched to 2F66 C:142-206
          complexed with so4; mutant
          1. region f:145-206 [133032] picpiclink
        3. 2caz picpicxrefxrefxrefxref
          1. region c:139-203 [130171] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk