Structural Classification of Proteins
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Superfamily: tRNA-binding arm

formerly a class II aminoacyl-tRNA synthetase N-domain
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Long alpha-hairpin [46556]
    2 helices; antiparallel hairpin, left-handed twist
  4. Superfamily: tRNA-binding arm [46589]
    formerly a class II aminoacyl-tRNA synthetase N-domain
    link to SUPERFAMILY database - Superfamily

Families:

  1. Seryl-tRNA synthetase (SerRS) [46590] (1)
    1. Seryl-tRNA synthetase (SerRS) [46591]
      1. Thermus thermophilus, strain hb27 [TaxId: 274] [46592] (4)
        1. 1set picpicxref
          complexed with ssa
          1. region a:1-110 [15708] picpiclink
          2. region b:1-110 [15709] picpiclink
        2. 1sry picpicxref
          1. region a:1-110 [15706] picpiclink
          2. region b:1-110 [15707] picpiclink
        3. 1ses picpicxref
          complexed with ahx, amp
          1. region a:1-110 [15710] picpiclink
          2. region b:1-110 [15711] picpiclink
        4. 1ser picpicxref
          complexed with dhu
          1. region a:1-110 [15712] picpiclink
          2. region b:501-610 [15713] picpiclink
  2. Phenylalanyl-tRNA synthetase (PheRS) [46593] (1)
    1. Phenylalanyl-tRNA synthetase (PheRS) [46594]
      1. Thermus thermophilus [TaxId: 274] [46595] (2)
        1. 2iy5 picpicxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1eiya1
          complexed with fya, mg
          1. region a:15-84 [137792] picpiclink
        2. 1eiy picpicxrefxrefxrefxrefxrefxref
          1. region a:6-84 [15714] picpiclink
  3. Valyl-tRNA synthetase (ValRS) C-terminal domain [81635] (1)
    1. Valyl-tRNA synthetase (ValRS) C-terminal domain [81634]
      1. Thermus thermophilus [TaxId: 274] [81633] (3)
        1. 1ivs picpicxrefxrefxref
          complexed with vaa
          1. region a:797-862 [76855] picpiclink
          2. region b:797-862 [76859] picpiclink
        2. 1gax picpicxrefxrefxref
          protein/RNA complex; complexed with vaa, zn
          1. region a:797-862 [75842] picpiclink
          2. region b:797-862 [75844] picpiclink
        3. 1iyw picpicxrefxrefxref
          preliminary structure of ligand-free enzyme; CA-atoms only
          1. region a:797-862 [83807] picpiclink
          2. region b:797-862 [83811] picpiclink
  4. Methicillin resistance protein FemA probable tRNA-binding arm [81671] (1)
    inserted in the C-terminal NAT-like domain
    1. Methicillin resistance protein FemA probable tRNA-binding arm [81672]
      proposed to bind tRNA-Gly
      1. Staphylococcus aureus [TaxId: 1280] [81673] (1)
        1. 1lrz picpicxref
          1. region a:245-309 [78167] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk