Structural Classification of Proteins
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Fold: alpha-alpha superhelix

multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: alpha-alpha superhelix [48370]
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

Superfamilies:

  1. ARM repeat [48371] (23)
    link to SUPERFAMILY database - Superfamily
    1. Armadillo repeat [48372] (9)
      1. beta-Catenin [48373]
        1. Mouse (Mus musculus) [TaxId: 10090] [48374] (6) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [48375] (10) picpic
          SQ P35222 145-664
      2. Importin alpha [48376]
        1. Mouse (Mus musculus) [TaxId: 10090] [48377] (8) picpic
      3. Importin beta [48378]
        1. Human (Homo sapiens) [TaxId: 9606] [48379] (11) picpic
        2. Mouse (Mus musculus) [TaxId: 10090] [48380] (1) picpic
        3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140814] (5) picpic
          SQ Q06142 1-861
      4. Karyopherin beta2 [48381]
        1. Human (Homo sapiens) [TaxId: 9606] [48382] (1) picpic
      5. Karyopherin alpha [48383]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [48384] (8) picpic
          SQ Q02821 12-514
      6. Exportin Cse1p [116998]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [116999] (3) picpic
          SQ P33307
    2. Clathrin adaptor core protein [74771] (2)
      1. Adaptin alpha C subunit N-terminal fragment [74772]
        1. Mouse (Mus musculus) [TaxId: 10090] [74773] (1) picpic
      2. Adaptin beta subunit N-terminal fragment [74774]
        1. Human (Homo sapiens) [TaxId: 9606] [74775] (1) picpic
    3. HEAT repeat [48385] (2)
      Pfam 02985
      1. Constant regulatory domain of protein phosphatase 2a, pr65alpha [48386]
        1. Human (Homo sapiens) [TaxId: 9606] [48387] (13) picpic
      2. Cullin-associated NEDD8-dissociated protein 1 (Tip120) [117000]
        1. Human (Homo sapiens) [TaxId: 9606] [117001] (1) picpic
          SQ Q86VP6 4-1210
    4. MIF4G domain-like [100908] (5)
      duplication: family members contains 2 or more structurally similar domains of this fold connected by unstructured linkers
      1. Eukaryotic initiation factor eIF4G [48388]
        1. Human (Homo sapiens) [TaxId: 9606] [48389] (5) picpic
      2. Translation initiation factor eIF-2b epsilon [101403]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [101404] (1) picpic
      3. Regulator of nonsense transcripts 2, UPF2 [101405]
        1. Human (Homo sapiens) [TaxId: 9606] [101406] (1) picpic
      4. CBP80, 80KDa nuclear cap-binding protein [63606]
        contains three domains of this fold connected with long linkers
        1. Human (Homo sapiens) [TaxId: 9606] [63607] (6) picpic
      5. Programmed cell death 4, PDCD4 [140815]
        1. Mouse (Mus musculus) [TaxId: 10090] [140816] (5) picpic
          SQ Q61823 322-448! SQ Q61823 322-450
    5. PHAT domain [89129] (1)
      pseudo-HEAT repeat
      1. RNA-binding protein Smaug [89130]
        1. Drosophila melanogaster [TaxId: 7227] [89131] (1) picpic
    6. Mo25 protein [101407] (1)
      1. Mo25 protein [101408]
        1. Human (Homo sapiens) [TaxId: 9606] [101409] (2) picpic
    7. Leukotriene A4 hydrolase C-terminal domain [63608] (1)
      1. Leukotriene A4 hydrolase C-terminal domain [63609]
        1. Human (Homo sapiens) [TaxId: 9606] [63610] (15) picpic
          SQ P09960
    8. Clathrin heavy chain proximal leg segment [48390] (1)
      1. Clathrin heavy chain proximal leg segment [48391]
        1. Cow (Bos taurus) [TaxId: 9913] [48392] (1) picpic
    9. Clathrin heavy-chain linker domain [48393] (1)
      1. Clathrin heavy-chain linker domain [48394]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [48395] (4) picpic
    10. Leucine-rich repeat variant [48396] (1)
      1. Leucine-rich repeat variant [48397]
        contains a FeS4 centre
        1. Azotobacter vinelandii [TaxId: 354] [48398] (1) picpic
    11. Phoshoinositide 3-kinase (PI3K) helical domain [48399] (2)
      1. Phoshoinositide 3-kinase (PI3K) helical domain [48400]
        1. Pig (Sus scrofa) [TaxId: 9823] [48401] (5) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [48402] (3) picpic
    12. Pumilio repeat [63611] (1)
      1. Pumilio 1 [63612]
        1. Human (Homo sapiens) [TaxId: 9606] [63613] (9) picpic
    13. Regulatory subunit H of the V-type ATPase [63614] (1)
      1. Regulatory subunit H of the V-type ATPase [63615]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [63616] (1) picpic
    14. PBS lyase HEAT-like repeat [101410] (2)
      Pfam 03130
      1. Hypothetical protein YibA [101411]
        1. Escherichia coli [TaxId: 562] [101412] (1) picpic
      2. MTH187 [109963]
        1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [109964] (1) picpic
          SQ O26289
    15. BC3264-like [109965] (2)
      Pfam 06352; DUF1061
      1. Hypothetical protein BC3264 [109966]
        1. Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900] [109967] (1) picpic
          SQ Q81BA8
      2. Hypothetical protein EF3068 [140817]
        assigned by a closer overall structural similarity to BC3264; predicted DNA alkylation repair enzyme
        1. Enterococcus faecalis [TaxId: 1351] [140818] (2) picpic
          SQ Q82ZI8 3-215
    16. Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain [109968] (1)
      N-terminal part of Pfam 06272
      1. Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain [109969]
        1. Human (Homo sapiens) [TaxId: 9606] [109970] (1) picpic
          SQ Q9UBQ5
    17. Exportin HEAT-like repeat [117002] (1)
      1. Exportin-1 (Xpo1, Crm1) [117003]
        1. Human (Homo sapiens) [TaxId: 9606] [117004] (1) picpic
          SQ O14980 707-1027
    18. B56-like [140819] (1)
      Pfam 01603; Protein phosphatase 2A regulatory B subunit family
      1. Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma [140820]
        1. Human (Homo sapiens) [TaxId: 9606] [140821] (7) picpic
          SQ Q13362 30-372! SQ Q13362 38-425
    19. HspBP1 domain [140822] (1)
      1. Hsp70-binding protein 1 (HspBP1) [140823]
        1. Human (Homo sapiens) [TaxId: 9606] [140824] (4) picpic
          SQ Q9NZL4 87-350
    20. GUN4-associated domain [140825] (2)
      PfamB 089177
      1. Mg-chelatase cofactor Gun4 [140826]
        Ycf53-like protein sll0558
        1. Synechocystis sp. pcc 6803 [TaxId: 1148] [140827] (1) picpic
          SQ P72583 1-82
      2. GUN4-like protein Ycf53, N-terminal domain [140828]
        1. Thermosynechococcus elongatus [TaxId: 146786] [140829] (2) picpic
          SQ Q8DIJ1 1-87
    21. Diap1 N-terninal region-like [140830] (1)
      contains two consequitive Pfam domains in one superhelical segment: Pfam 06371 and Pfam 06367
      1. Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) [140831]
        1. Mouse (Mus musculus) [TaxId: 10090] [140832] (6) picpic
          SQ O08808 133-475! SQ O08808 135-435! SQ O08808 83-443
    22. Plakophilin 1 helical region [140833] (1)
      1. Plakophilin 1 [140834]
        1. Human (Homo sapiens) [TaxId: 9606] [140835] (1) picpic
          SQ Q13835 244-721
    23. RPA1889-like [158764] (1)
      Pfam 09450; DUF2019; similar to the BC3264-like family
      1. Hypothetical protein RPA1889 [158765]
        1. Rhodopseudomonas palustris [TaxId: 1076] [158766] (1) picpic
          SQ Q6N8L4 3-123
  2. IP3 receptor type 1 binding core, domain 2 [100909] (1)
    link to SUPERFAMILY database - Superfamily
    1. IP3 receptor type 1 binding core, domain 2 [81895] (1)
      1. IP3 receptor type 1 binding core, domain 2 [81896]
        1. Mouse (Mus musculus) [TaxId: 10090] [81897] (1) picpic
  3. Chemosensory protein Csp2 [100910] (1)
    link to SUPERFAMILY database - Superfamily
    1. Chemosensory protein Csp2 [81898] (1)
      1. Chemosensory protein Csp2 [81899]
        1. Cabbage moth (Mamestra brassicae) [TaxId: 55057] [81900] (5) picpic
  4. Sec7 domain [48425] (1)
    link to SUPERFAMILY database - Superfamily
    1. Sec7 domain [48426] (6)
      Pfam 01369
      1. Exchange factor ARNO [48427]
        1. Human (Homo sapiens) [TaxId: 9606] [48428] (5) picpic
      2. Cytohesin-1/b2-1 [48429]
        1. Human (Homo sapiens) [TaxId: 9606] [48430] (1) picpic
        2. Mus musculus [TaxId: 10090] [158767] (4) picpic
      3. ARF guanine-exchange factor 1 [101413]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [101414] (1) picpic
      4. ARF guanine-exchange factor 2, Gea2 [74776]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [74777] (1) picpic
      5. RalF, N-terminal domain [117005]
        1. Legionella pneumophila [TaxId: 446] [117006] (2) picpic
          SQ Q8RT31 2-353
  5. Lipovitellin-phosvitin complex, superhelical domain [48431] (1)
    link to SUPERFAMILY database - Superfamily
    1. Lipovitellin-phosvitin complex, superhelical domain [48432] (1)
      1. Lipovitellin-phosvitin complex, superhelical domain [48433]
        1. Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308] [48434] (1) picpic
  6. Bacterial muramidases [48435] (1)
    link to SUPERFAMILY database - Superfamily
    1. Bacterial muramidases [48436] (1)
      1. 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain [48437]
        1. Escherichia coli [TaxId: 562] [48438] (3) picpic
  7. Aconitase B, N-terminal domain [74778] (1)
    link to SUPERFAMILY database - Superfamily
    1. Aconitase B, N-terminal domain [74779] (1)
      1. Aconitase B, N-terminal domain [74780]
        1. Escherichia coli [TaxId: 562] [74781] (1) picpic
  8. HCP-like [81901] (1)
    link to SUPERFAMILY database - Superfamily
    1. HCP-like [81902] (2)
      Helicobacter Cysteine-rich Protein
      1. Cysteine rich protein B (HcpB) [81903]
        a penicillin-binding protein
        1. Helicobacter pylori [TaxId: 210] [81904] (1) picpic
      2. Cysteine rich protein C (HcpC) [101415]
        1. Helicobacter pylori [TaxId: 210] [101416] (1) picpic
  9. Protein prenylyltransferase [48439] (1)
    link to SUPERFAMILY database - Superfamily
    1. Protein prenylyltransferase [48440] (3)
      1. Protein farnesyltransferase alpha-subunit [48441]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [48442] (29) picpic
          SQ Q04631 55-369
        2. Human (Homo sapiens) [TaxId: 9606] [69093] (20) picpic
          SQ P49354
      2. Rab geranylgeranyltransferase alpha-subunit, N-terminal domain [48443]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [48444] (2) picpic
  10. 14-3-3 protein [48445] (1)
    link to SUPERFAMILY database - Superfamily
    1. 14-3-3 protein [48446] (5)
      1. zeta isoform [48449]
        1. Cow (Bos taurus) [TaxId: 9913] [48450] (9) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [48451] (7) picpic
      2. 14-3-3-like protein C [89132]
        1. Common tobacco (Nicotiana tabacum) [TaxId: 4097] [89133] (6) picpic
      3. 14-3-3 domain containing protein cgd7_2470 [158768]
        1. Cryptosporidium parvum [TaxId: 5807] [158769] (1) picpic
          SQ Q5CYG0 8-227
      4. 14-3-3 protein cgd1_2980 [158770]
        1. Cryptosporidium parvum [TaxId: 5807] [158771] (2) picpic
          SQ Q5CSF3 25-247
  11. TPR-like [48452] (8)
    link to SUPERFAMILY database - Superfamily
    1. Tetratricopeptide repeat (TPR) [48453] (20)
      1. Protein phosphatase 5 [48454]
        1. Human (Homo sapiens) [TaxId: 9606] [48455] (6) picpic
      2. Hop [48456]
        1. Human (Homo sapiens) [TaxId: 9606] [48457] (2) picpic
      3. Vesicular transport protein sec17 [48458]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [48459] (1) picpic
      4. Neutrophil cytosolic factor 2 (NCF-2, p67-phox) [48460]
        1. Human (Homo sapiens) [TaxId: 9606] [48461] (3) picpic
      5. Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) [48462]
        1. Human (Homo sapiens) [TaxId: 9606] [48463] (6) picpic
        2. Trypanosoma brucei [TaxId: 5691] [63617] (1) picpic
      6. Cyclophilin 40 [63618]
        1. Cow (Bos taurus) [TaxId: 9913] [63619] (2) picpic
      7. FKBP51, C-terminal domain [81905]
        1. Human (Homo sapiens) [TaxId: 9606] [81906] (1) picpic
        2. Monkey (Saimiri boliviensis) [TaxId: 27679] [81907] (1) picpic
      8. Hypothetical protein RSGI Ruh-001 [81908]
        a Fis1p-like and Cgi-135 homologous domain
        1. Mouse (Mus musculus) [TaxId: 10090] [81909] (1) picpic
      9. Mitochondria fission protein Fis1 [101417]
        1. Human (Homo sapiens) [TaxId: 9606] [101418] (2) picpic
        2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140836] (3) picpic
          SQ P40515 1-138
      10. FKBP52 (FKBP4), C-terminal domain [109971]
        1. Human (Homo sapiens) [TaxId: 9606] [109972] (2) picpic
          SQ Q02790 145-427
      11. O-GlcNAc transferase p110 subunit, OGT [109973]
        1. Human (Homo sapiens) [TaxId: 9606] [109974] (1) picpic
          SQ O15294 16-400
      12. Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 [117007]
        1. Human (Homo sapiens) [TaxId: 9606] [117008] (1) picpic
          SQ P13674 161-254
      13. Lipoprotein NlpI [117009]
        1. Escherichia coli [TaxId: 562] [117010] (1) picpic
          SQ P39833 26-294
      14. STIP1 homology and U box-containing protein 1, STUB1 [140837]
        1. Mouse (Mus musculus) [TaxId: 10090] [140838] (4) picpic
          SQ Q9WUD1 24-224
      15. Mitochondrial import receptor subunit tom20-3 [140839]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [140840] (1) picpic
          SQ P82874 1-145
      16. Putative 70 kda peptidylprolyl isomerase PFL2275c [140841]
        1. Plasmodium falciparum [TaxId: 5833] [140842] (2) picpic
          SQ Q8I4V8 128-280
      17. SMG-7 [140843]
        1. Human (Homo sapiens) [TaxId: 9606] [140844] (2) picpic
          SQ Q92540 1-497
    2. Transcription factor MalT domain III [69094] (1)
      1. Transcription factor MalT domain III [69095]
        1. Escherichia coli [TaxId: 562] [69096] (1) picpic
    3. BTAD-like [140845] (1)
      Pfam 03704; Bacterial transcriptional activator domain
      1. Probable regulatory protein EmbR, middle domain [140846]
        1. Mycobacterium tuberculosis [TaxId: 1773] [140847] (3) picpic
          SQ P66799 105-283
    4. PrgX C-terminal domain-like [140848] (1)
      1. PrgX [140849]
        1. Enterococcus faecalis [TaxId: 1351] [140850] (40) picpic
          SQ Q04114 70-287! SQ Q04114 71-301
    5. Atu0120-like [158772] (1)
      Pfam 06041; DUF924
      1. Hypothetical protein Atu0120 [158773]
        1. Agrobacterium tumefaciens [TaxId: 358] [158774] (2) picpic
          SQ Q8UJ18 1-179
    6. SusD-like [158775] (3)
      TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam 07980
      1. Uncharacterized protein BT3984 [158776]
        1. Bacteroides thetaiotaomicron [TaxId: 818] [158777] (1) picpic
          SQ Q8A0N7 31-537
      2. Uncharacterized protein BF3025 [158778]
        1. Bacteroides fragilis [TaxId: 817] [158779] (1) picpic
          SQ Q5LB02 32-490
      3. Starch utilization system protein SusD [158780]
        1. Bacteroides thetaiotaomicron [TaxId: 818] [158781] (12) picpic
          SQ Q8A1G2 42-551
    7. HAT/Suf repeat [158782] (1)
      includes Pfam 05843
      1. Cleavage stimulation factor 77 kDa subunit CSTF3 [158783]
        1. Mouse (Mus musculus) [TaxId: 10090] [158784] (3) picpic
          SQ Q99LI7 21-549! SQ Q99LI7 242-549
    8. CT2138-like [158785] (1)
      probable biological unit is a homohexamer
      1. Hypothetical protein CT2138 [158786]
        1. Chlorobium tepidum [TaxId: 1097] [158787] (6) picpic
          SQ Q8KAL8 2-157
  12. ENTH/VHS domain [48464] (4)
    link to SUPERFAMILY database - Superfamily
    1. ENTH domain [48465] (2)
      1. Epsin 1 [48466]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [48467] (3) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [63620] (1) picpic
    2. VHS domain [48468] (5)
      1. Hrs [48469]
        protein involved in membrane trafficking and signal transduction
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [48470] (1) picpic
      2. Tom1 protein [48471]
        1. Human (Homo sapiens) [TaxId: 9606] [48472] (1) picpic
      3. ADP-ribosylation factor binding protein Gga1 [74782]
        1. Human (Homo sapiens) [TaxId: 9606] [74783] (5) picpic
      4. ADP-ribosylation factor binding protein Gga2 [89134]
        1. Human (Homo sapiens) [TaxId: 9606] [89135] (1) picpic
      5. ADP-ribosylation factor binding protein Gga3 [69097]
        1. Human (Homo sapiens) [TaxId: 9606] [69098] (3) picpic
    3. Phosphoinositide-binding clathrin adaptor, N-terminal domain [100911] (2)
      1. Clathrin assembly lymphoid myeloid leukaemia protein, Calm [100912]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [100913] (4) picpic
      2. AP180 (Lap) [100914]
        1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [100915] (1) picpic
    4. RPR domain (SMART 00582 ) [109975] (1)
      found in proteins involved in regulation of nuclear pre-mRNA; some sequence similarity to VHS domain
      1. PCF11 protein [109976]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109977] (3) picpic
          SQ P39081 1-140
  13. Translin [74784] (1)
    link to SUPERFAMILY database - Superfamily
    1. Translin [74785] (2)
      1. Translin [74786]
        synonym: testis/brain RNA-binding protein, TB-RBP
        1. Mouse (Mus musculus) [TaxId: 10090] [74787] (1) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [101419] (1) picpic
  14. Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain [69099] (1)
    link to SUPERFAMILY database - Superfamily
    1. Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain [69100] (2)
      1. Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain [69101]
        1. Mouse (Mus musculus) [TaxId: 10090] [69102] (1) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [158788] (9) picpic
          SQ P46060 431-587! SQ P46060 432-587
  15. Arp2/3 complex 16 kDa subunit ARPC5 [69103] (1)
    link to SUPERFAMILY database - Superfamily
    1. Arp2/3 complex 16 kDa subunit ARPC5 [69104] (1)
      1. Arp2/3 complex 16 kDa subunit ARPC5 [69105]
        1. Cow (Bos taurus) [TaxId: 9913] [69106] (10) picpic
          SQ Q9CPW4 # 99% sequence identity
  16. FliG [48029] (1)
    fragmented superhelix; consist of 3/4-helical motifs and connecting helices
    link to SUPERFAMILY database - Superfamily
    1. FliG [48030] (1)
      1. FliG [48031]
        1. Thermotoga maritima [TaxId: 2336] [48032] (2) picpic
  17. Cullin repeat-like [74788] (2)
    link to SUPERFAMILY database - Superfamily
    1. Cullin repeat [74789] (2)
      1. Cullin homolog 1, Cul-1 [74790]
        1. Human (Homo sapiens) [TaxId: 9606] [74791] (3) picpic
          SQ Q13616 17-776
      2. Cullin-4A [158789]
        1. Human (Homo sapiens) [TaxId: 9606] [158790] (1) picpic
          SQ Q13619 55-401
    2. Exocyst complex component [140851] (2)
      includes Pfam 03081
      1. Exocyst complex component EXO84 [140852]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140853] (1) picpic
          SQ P38261 525-753
      2. Exocyst complex component EXO70 [140854]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140855] (1) picpic
          SQ P19658 73-623
  18. C-terminal domain of Ku80 [101420] (1)
    link to SUPERFAMILY database - Superfamily
    1. C-terminal domain of Ku80 [101421] (1)
      1. C-terminal domain of Ku80 [101422]
        1. Human (Homo sapiens) [TaxId: 9606] [101423] (2) picpic
  19. Hypothetical protein ST1625 [101424] (1)
    link to SUPERFAMILY database - Superfamily
    1. Hypothetical protein ST1625 [101425] (1)
      1. Hypothetical protein ST1625 [101426]
        1. Archaeon Sulfolobus tokodaii [TaxId: 111955] [101427] (1) picpic
          structural genomics
  20. Cytochrome c oxidase subunit E [48479] (1)
    link to SUPERFAMILY database - Superfamily
    1. Cytochrome c oxidase subunit E [48480] (1)
      1. Cytochrome c oxidase subunit E [48481]
        1. Cow (Bos taurus) [TaxId: 9913] [48482] (21) picpic
  21. USP8 N-terminal domain-like [140856] (1)
    link to SUPERFAMILY database - Superfamily
    1. USP8 N-terminal domain-like [140857] (1)
      PfamB 029795
      1. Ubiquitin carboxyl-terminal hydrolase 8, USH8 [140858]
        1. Human (Homo sapiens) [TaxId: 9606] [140859] (2) picpic
          SQ P40818 6-139
  22. Pseudo ankyrin repeat-like [140860] (1)
    contains three helices per turn of the superhelix
    link to SUPERFAMILY database - Superfamily
    1. Pseudo ankyrin repeat [140861] (1)
      one repeat consist of 3 helices; there are similarities in the repeat sequence and assembly with the ankyrin repeat (scop_fa 48404)
      1. Hypothetical protein LPG2416 [140862]
        there are regular repeats in the middle part and iess regular superhelical turns at both ends
        1. Legionella pneumophila [TaxId: 446] [140863] (2) picpic
          SQ Q5ZSV0 3-348
  23. TROVE domain-like [140864] (1)
    consist of two superhelical sections arranged like a horse-shoe
    link to SUPERFAMILY database - Superfamily
    1. TROVE domain-like [140865] (1)
      Pfam 05731
      1. 60-kda SS-aARo ribonucleoprotein [140866]
        1. African clawed frog (Xenopus laevis) [TaxId: 8355] [140867] (5) picpic
          SQ P42700 5-363
  24. MgtE N-terminal domain-like [158791] (1)
    made of short helices; approximately 2.5 helices per turn of superhelix
    1. MgtE N-terminal domain-like [158792] (2)
      Pfam 03448
      1. Magnesium transporter MgtE [158793]
        1. Enterococcus faecalis [TaxId: 1351] [158794] (1) picpic
          SQ Q830V1 6-135
        2. Thermus thermophilus [TaxId: 274] [158795] (4) picpic
          SQ Q5SMG8 7-131
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk