Structural Classification of Proteins
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Superfamily: TPR-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: alpha-alpha superhelix [48370]
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. Superfamily: TPR-like [48452]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Tetratricopeptide repeat (TPR) [48453] (20)
    1. Protein phosphatase 5 [48454]
      1. Human (Homo sapiens) [TaxId: 9606] [48455] (6)
        1. 1a17 picpic
          complexed with so4
          1. chain a [19206] picpiclink
        2. 1wao picpicxrefxrefxrefxref
          automatically matched to d1a17__
          complexed with mn
          1. region 1:23-175 [120813] picpiclink
        3. 1wao picpicxrefxrefxrefxref
          automatically matched to d1a17__
          complexed with mn
          1. region 2:23-175 [120815] picpiclink
        4. 1wao picpicxrefxrefxrefxref
          automatically matched to d1a17__
          complexed with mn
          1. region 3:23-175 [120817] picpiclink
        5. 1wao picpicxrefxrefxrefxref
          automatically matched to d1a17__
          complexed with mn
          1. region 4:23-175 [120819] picpiclink
        6. 2bug picpic
          complexed with ace; mutant
          1. region a:18-147 [129203] picpiclink
    2. Hop [48456]
      1. Human (Homo sapiens) [TaxId: 9606] [48457] (2)
        1. 1elw picpic
          TPR1-domain
          complexed with ni, trs
          1. chain a [19207] picpiclink
          2. chain b [19208] picpiclink
        2. 1elr picpic
          TPR2-domain
          complexed with ace, ni
          1. chain a [19209] picpiclink
    3. Vesicular transport protein sec17 [48458]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [48459] (1)
        1. 1qqe picpic
          mutant
          1. chain a [19210] picpiclink
    4. Neutrophil cytosolic factor 2 (NCF-2, p67-phox) [48460]
      1. Human (Homo sapiens) [TaxId: 9606] [48461] (3)
        1. 1hh8 picpic
          complexed with flc; mutant
          1. chain a [61042] picpiclink
        2. 1wm5 picpic
          automatically matched to d1e96b_
          complexed with so4
          1. region a:2-186 [121028] picpiclink
        3. 1e96 picpicxref
          complexed with gtp, mg; mutant
          1. chain b [19211] picpiclink
    5. Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) [48462]
      1. Human (Homo sapiens) [TaxId: 9606] [48463] (6)
        1. 1fch picpic
          complexed with the pts1 peptide
          1. chain a [19212] picpiclink
          2. chain b [19213] picpiclink
        2. 2j9q picpic
          automatically matched to d1fcha_
          complexed with sr
          1. region a:321-639 [138152] picpiclink
        3. 2c0m picpic
          automatically matched to d1fcha_
          1. region a:284-602 [129596] picpiclink
        4. 2c0m picpic
          automatically matched to d1fcha_
          1. region b:284-602 [129597] picpiclink
        5. 2c0m picpic
          automatically matched to d1fcha_
          1. region c:285-602 [129598] picpiclink
        6. 2c0m picpic
          automatically matched to d1fcha_
          1. region f:285-602 [129599] picpiclink
      2. Trypanosoma brucei [TaxId: 5691] [63617] (1)
        1. 1hxi picpic
          complexed with mg
          1. chain a [61366] picpiclink
    6. Cyclophilin 40 [63618]
      1. Cow (Bos taurus) [TaxId: 9913] [63619] (2)
        1. 1ihg picpicxref
          complexed with gol
          1. region a:197-365 [62380] picpiclink
        2. 1iip picpicxref
          truncated form(?); adopts a different fold
          complexed with gol
          1. region a:197-298 [62451] picpiclink
    7. FKBP51, C-terminal domain [81905]
      1. Human (Homo sapiens) [TaxId: 9606] [81906] (1)
        1. 1kt0 picpicxref
          complexed with so4; mutant
          1. region a:254-412 [77525] picpiclink
      2. Monkey (Saimiri boliviensis) [TaxId: 27679] [81907] (1)
        1. 1kt1 picpicxref
          complexed with so4
          1. region a:254-421 [77528] picpiclink
    8. Hypothetical protein RSGI Ruh-001 [81908]
      a Fis1p-like and Cgi-135 homologous domain
      1. Mouse (Mus musculus) [TaxId: 10090] [81909] (1)
        1. 1iyg picpic
          structural genomics
          1. chain a [76947] picpiclink
    9. Mitochondria fission protein Fis1 [101417]
      1. Human (Homo sapiens) [TaxId: 9606] [101418] (2)
        1. 1nzn picpic
          complexed with gol, so4
          1. chain a [92382] picpiclink
        2. 1pc2 picpic
          1. chain a [94427] picpiclink
      2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140836] (3)
        SQ P40515 1-138
        1. 2pqr picpic
          automatically matched to d1y8ma1
          complexed with au
          1. region b:5-128 [149793] picpiclink
        2. 2pqn picpic
          automatically matched to d1y8ma1
          1. region a:4-129 [149792] picpiclink
        3. 1y8m picpic
          1. region a:1-138 [122757] picpiclink
    10. FKBP52 (FKBP4), C-terminal domain [109971]
      1. Human (Homo sapiens) [TaxId: 9606] [109972] (2)
        SQ Q02790 145-427
        1. 1p5q picpicxref
          second FKPB domain
          complexed with so4
          1. region a:258-427 [104068] picpiclink
          2. region b:258-427 [104070] picpiclink
          3. region c:258-427 [104072] picpiclink
        2. 1qz2 picpicxref
          second FKPB domain
          1. region a:258-425 [104663] picpiclink
          2. region b:258-425 [104665] picpiclink
          3. region c:258-425 [104667] picpiclink
    11. O-GlcNAc transferase p110 subunit, OGT [109973]
      1. Human (Homo sapiens) [TaxId: 9606] [109974] (1)
        SQ O15294 16-400
        1. 1w3b picpic
          complexed with ca
          1. chain a [109149] picpiclink
          2. chain b [109150] picpiclink
    12. Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 [117007]
      1. Human (Homo sapiens) [TaxId: 9606] [117008] (1)
        SQ P13674 161-254
        1. 1tjc picpic
          mutant
          1. chain a [112440] picpiclink
          2. chain b [112441] picpiclink
    13. Lipoprotein NlpI [117009]
      1. Escherichia coli [TaxId: 562] [117010] (1)
        SQ P39833 26-294
        1. 1xnf picpic
          Structural genomics target
          complexed with tmn
          1. chain a [115580] picpiclink
          2. chain b [115581] picpiclink
    14. STIP1 homology and U box-containing protein 1, STUB1 [140837]
      1. Mouse (Mus musculus) [TaxId: 10090] [140838] (4)
        SQ Q9WUD1 24-224
        1. 2c2l picpicxrefxrefxrefxref
          includes linker region 157-224 that forms an alpha hairpin dimerisation subdomain
          complexed with ni, so4
          1. region a:24-224 [129672] picpiclink
        2. 2c2l picpicxrefxrefxrefxref
          automatically matched to 2C2L A:24-224
          complexed with ni, so4
          1. region b:24-224 [129674] picpiclink
        3. 2c2l picpicxrefxrefxrefxref
          automatically matched to 2C2L A:24-224
          complexed with ni, so4
          1. region c:24-224 [129676] picpiclink
        4. 2c2l picpicxrefxrefxrefxref
          automatically matched to 2C2L A:24-224
          complexed with ni, so4
          1. region d:24-224 [129678] picpiclink
    15. Mitochondrial import receptor subunit tom20-3 [140839]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [140840] (1)
        SQ P82874 1-145
        1. 1zu2 picpic
          1. region a:1-145 [125662] picpiclink
    16. Putative 70 kda peptidylprolyl isomerase PFL2275c [140841]
      1. Plasmodium falciparum [TaxId: 5833] [140842] (2)
        SQ Q8I4V8 128-280
        1. 2fbn picpic
          1. region a:22-174 [133254] picpiclink
        2. 2fbn picpic
          automatically matched to 2FBN A:22-174
          1. region b:25-174 [133255] picpiclink
    17. SMG-7 [140843]
      1. Human (Homo sapiens) [TaxId: 9606] [140844] (2)
        SQ Q92540 1-497
        1. 1ya0 picpic
          complexed with so4
          1. region a:1-497 [122785] picpiclink
        2. 1ya0 picpic
          automatically matched to 1YA0 A:1-497
          complexed with so4
          1. region b:1-497 [122786] picpiclink
  2. Transcription factor MalT domain III [69094] (1)
    1. Transcription factor MalT domain III [69095]
      1. Escherichia coli [TaxId: 562] [69096] (1)
        1. 1hz4 picpic
          complexed with bez, gol, so4
          1. chain a [65960] picpiclink
  3. BTAD-like [140845] (1)
    Pfam 03704; Bacterial transcriptional activator domain
    1. Probable regulatory protein EmbR, middle domain [140846]
      1. Mycobacterium tuberculosis [TaxId: 1773] [140847] (3)
        SQ P66799 105-283
        1. 2ff4 picpicxrefxrefxrefxref
          automatically matched to 2FEZ A:105-283
          1. region a:105-283 [133368] picpiclink
        2. 2ff4 picpicxrefxrefxrefxref
          automatically matched to 2FEZ A:105-283
          1. region b:105-283 [133371] picpiclink
        3. 2fez picpicxrefxref
          1. region a:105-283 [133358] picpiclink
  4. PrgX C-terminal domain-like [140848] (1)
    1. PrgX [140849]
      1. Enterococcus faecalis [TaxId: 1351] [140850] (40)
        SQ Q04114 70-287! SQ Q04114 71-301
        1. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          mutant
          1. region a:71-301 [127436] picpiclink
        2. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region b:71-301 [127438] picpiclink
        3. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region c:71-301 [127440] picpiclink
        4. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region d:71-301 [127442] picpiclink
        5. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region e:71-301 [127444] picpiclink
        6. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region f:71-301 [127446] picpiclink
        7. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region g:71-301 [127448] picpiclink
        8. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region h:71-301 [127450] picpiclink
        9. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region i:71-301 [127452] picpiclink
        10. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region j:71-301 [127454] picpiclink
        11. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region k:71-301 [127456] picpiclink
        12. 2awi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region l:71-301 [127458] picpiclink
        13. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region a:71-287 [127501] picpiclink
        14. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region b:71-287 [127503] picpiclink
        15. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region c:71-287 [127505] picpiclink
        16. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region d:71-287 [127507] picpiclink
        17. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region e:71-287 [127509] picpiclink
        18. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region f:71-287 [127511] picpiclink
        19. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region g:71-287 [127513] picpiclink
        20. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region h:71-287 [127515] picpiclink
        21. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region i:71-287 [127517] picpiclink
        22. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region j:71-287 [127519] picpiclink
        23. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region k:71-287 [127521] picpiclink
        24. 2axu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region l:71-287 [127523] picpiclink
        25. 2grl picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region a:70-287 [135561] picpiclink
        26. 2grl picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region b:70-286 [135563] picpiclink
        27. 2grl picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region c:70-287 [135565] picpiclink
        28. 2grl picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region d:70-286 [135567] picpiclink
        29. 2aw6 picpicxrefxref
          1. region a:70-287 [127409] picpiclink
        30. 2aw6 picpicxrefxref
          automatically matched to 2AW6 A:70-287
          1. region b:70-286 [127411] picpiclink
        31. 2axz picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region a:70-287 [127537] picpiclink
        32. 2axz picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region b:70-287 [127539] picpiclink
        33. 2axz picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region c:73-284 [127541] picpiclink
        34. 2axz picpicxrefxrefxrefxref
          automatically matched to 2AW6 A:70-287
          1. region d:70-287 [127543] picpiclink
        35. 2grm picpicxrefxref
          mutant
          1. region a:70-315 [147162] picpiclink
        36. 2grm picpicxrefxref
          automatically matched to 2GRM A:70-315
          mutant
          1. region b:70-315 [147164] picpiclink
        37. 2axv picpicxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region a:71-301 [127525] picpiclink
        38. 2axv picpicxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region b:71-301 [127527] picpiclink
        39. 2axv picpicxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region c:71-301 [127529] picpiclink
        40. 2axv picpicxrefxrefxrefxref
          automatically matched to 2AWI A:71-301
          mutant
          1. region d:71-301 [127531] picpiclink
  5. Atu0120-like [158772] (1)
    Pfam 06041; DUF924
    1. Hypothetical protein Atu0120 [158773]
      1. Agrobacterium tumefaciens [TaxId: 358] [158774] (2)
        SQ Q8UJ18 1-179
        1. 2i6h picpic
          complexed with ca, cl
          1. region a:1-179 [147528] picpiclink
        2. 2i6h picpic
          automatically matched to 2I6H A:1-179
          complexed with ca, cl
          1. region b:4-179 [147529] picpiclink
  6. SusD-like [158775] (3)
    TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam 07980
    1. Uncharacterized protein BT3984 [158776]
      1. Bacteroides thetaiotaomicron [TaxId: 818] [158777] (1)
        SQ Q8A0N7 31-537
        1. 3cgh picpic
          complexed with act, zn
          1. region a:31-537 [156618] picpiclink
    2. Uncharacterized protein BF3025 [158778]
      1. Bacteroides fragilis [TaxId: 817] [158779] (1)
        SQ Q5LB02 32-490
        1. 3ejn picpic
          complexed with fmt, mg, pg4
          1. region a:32-490 [158180] picpiclink
    3. Starch utilization system protein SusD [158780]
      1. Bacteroides thetaiotaomicron [TaxId: 818] [158781] (12)
        SQ Q8A1G2 42-551
        1. 3ckc picpic
          automatically matched to 3CK7 A:42-551
          complexed with ca, edo, mes, peg
          1. region a:42-551 [156736] picpiclink
        2. 3ckc picpic
          automatically matched to 3CK7 A:42-551
          complexed with ca, edo, mes, peg
          1. region b:42-551 [156737] picpiclink
        3. 3ck8 picpic
          automatically matched to 3CK7 A:42-551
          complexed with bcd, ca, edo
          1. region a:42-551 [156730] picpiclink
        4. 3ck8 picpic
          automatically matched to 3CK7 A:42-551
          complexed with bcd, ca, edo
          1. region b:42-551 [156731] picpiclink
        5. 3ck7 picpic
          complexed with acx, ca
          1. region a:42-551 [156726] picpiclink
        6. 3ck7 picpic
          automatically matched to 3CK7 A:42-551
          complexed with acx, ca
          1. region b:42-551 [156727] picpiclink
        7. 3ck7 picpic
          automatically matched to 3CK7 A:42-551
          complexed with acx, ca
          1. region c:42-551 [156728] picpiclink
        8. 3ck7 picpic
          automatically matched to 3CK7 A:42-551
          complexed with acx, ca
          1. region d:42-551 [156729] picpiclink
        9. 3ck9 picpic
          automatically matched to 3CK7 A:42-551
          complexed with ca, edo, glc
          1. region a:42-551 [156732] picpiclink
        10. 3ck9 picpic
          automatically matched to 3CK7 A:42-551
          complexed with ca, edo, glc
          1. region b:42-551 [156733] picpiclink
        11. 3ckb picpic
          automatically matched to 3CK7 A:42-551
          complexed with ca, mlr
          1. region a:42-551 [156734] picpiclink
        12. 3ckb picpic
          automatically matched to 3CK7 A:42-551
          complexed with ca, mlr
          1. region b:42-551 [156735] picpiclink
  7. HAT/Suf repeat [158782] (1)
    includes Pfam 05843
    1. Cleavage stimulation factor 77 kDa subunit CSTF3 [158783]
      1. Mouse (Mus musculus) [TaxId: 10090] [158784] (3)
        SQ Q99LI7 21-549! SQ Q99LI7 242-549
        1. 2ond picpic
          1. region a:242-549 [148899] picpiclink
        2. 2ond picpic
          automatically matched to 2OND A:242-549
          1. region b:242-549 [148900] picpiclink
        3. 2ooe picpic
          1. region a:21-549 [148923] picpiclink
  8. CT2138-like [158785] (1)
    probable biological unit is a homohexamer
    1. Hypothetical protein CT2138 [158786]
      1. Chlorobium tepidum [TaxId: 1097] [158787] (6)
        SQ Q8KAL8 2-157
        1. 2hr2 picpic
          complexed with cl, gol
          1. region a:2-157 [147369] picpiclink
        2. 2hr2 picpic
          automatically matched to 2HR2 A:2-157
          complexed with cl, gol
          1. region b:2-157 [147370] picpiclink
        3. 2hr2 picpic
          automatically matched to 2HR2 A:2-157
          complexed with cl, gol
          1. region c:2-157 [147371] picpiclink
        4. 2hr2 picpic
          automatically matched to 2HR2 A:2-157
          complexed with cl, gol
          1. region d:2-157 [147372] picpiclink
        5. 2hr2 picpic
          automatically matched to 2HR2 A:2-157
          complexed with cl, gol
          1. region e:2-157 [147373] picpiclink
        6. 2hr2 picpic
          automatically matched to 2HR2 A:2-157
          complexed with cl, gol
          1. region f:2-156 [147374] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk