Structural Classification of Proteins

Superfamily: Protein prenylyltransferase

: uperfamily

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: alpha-alpha superhelix [48370]
multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
Superfamily: Protein prenylyltransferase [48439]
uperfamily

Families:

Protein prenylyltransferase [48440] (3)
1. Protein farnesyltransferase alpha-subunit [48441]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [48442] (29)
    SQ Q04631 55-369
    1. 1d8d
      complex with K-ras4b peptide substrate
      1. chain a [19185]
    2. 1jcr
      complexed with acy, fpp, zn
      1. chain a [66506]
    3. 1kzp
      complex with k-ras4b peptide product
      complexed with acy, far, zn
      1. chain a [77640]
    4. 1jcs
      complexed with acy, fii, zn
      1. chain a [66508]
    5. 1kzo
      complex with k-ras4b peptide product and farnesyl diphosphate substrate bound simultaneously
      complexed with acy, far, fpp, zn
      1. chain a [77638]
    6. 2r2l
      automatically matched to d1o1ra_
      complexed with fpp, pb9, zn
      1. region a:54-368 [151535]
    7. 1o1t
      complexed with 2nh, mg, zn
      1. chain a [86551]
    8. 1o5m
      complexed with 336, fpp, zn
      1. chain a [92507]
    9. 1o1r
      complexed with grg, zn
      1. chain a [86547]
    10. 1o1s
      complexed with 1nh, zn
      1. chain a [86549]
    11. 1ft1
      complexed with zn
      1. chain a [19186]
    12. 1sa5
      complexed with acy, bmv, fpp, zn
      1. chain a [105404]
    13. 1s64
      complexed with 778, cl, mes, so4, zn
      1. chain a [105287]
      2. chain c [105289]
      3. chain e [105291]
      4. chain g [105293]
      5. chain i [105295]
      6. chain k [105297]
    14. 1n4q
      complexed with cl, mgm, tth, zn
      1. chain a [91635]
      2. chain c [91637]
      3. chain e [91639]
      4. chain g [91641]
      5. chain i [91643]
      6. chain k [91645]
    15. 1n4s
      complexed with cl, grg, tth, zn
      1. chain a [91659]
      2. chain c [91661]
      3. chain e [91663]
      4. chain g [91665]
      5. chain i [91667]
      6. chain k [91669]
    16. 2bed
      automatically matched to d1o1ra_
      complexed with 736, fpp, zn
      1. region a:54-366 [128375]
    17. 1qbq
      complexed with ace, act, hfp, zn
      1. chain a [19187]
    18. 1n4p
      complexed with cl, grg, tth, zn
      1. chain a [91623]
      2. chain c [91625]
      3. chain e [91627]
      4. chain g [91629]
      5. chain i [91631]
      6. chain k [91633]
    19. 3dpy
      automatically matched to d1d8da_
      complexed with acy, fpp, zn
      1. region a:55-377 [157825]
    20. 1n4r
      complexed with cl, mes, so4, tth, zn
      1. chain a [91647]
      2. chain c [91649]
      3. chain e [91651]
      4. chain g [91653]
      5. chain i [91655]
      6. chain k [91657]
    21. 1d8e
      complex with k-ras4b peptide substrate and FPP analog
      complexed with ace, fii
      1. chain a [19188]
    22. 1nl4
      complexed with ftl, hfp, zn; mutant
      1. chain a [80617]
    23. 1n95
      complexed with fth, hfp, zn
      1. chain a [80333]
    24. 1ft2
      complexed with fpp, zn
      1. chain a [19190]
    25. 1fpp
      complexed with fpp, po4, zn
      1. chain a [19189]
    26. 1ni1
      complexed with 2c5, hfp, zn
      1. chain a [91888]
    27. 1x81
      complexed with jan, zn
      1. chain a [114953]
    28. 1n9a
      complexed with fti, hfp, zn
      1. chain a [80338]
    29. 1n94
      complexed with hfp, tin, zn
      1. chain a [80331]
  2. Human (Homo sapiens) [TaxId: 9606] [69093] (20)
    SQ P49354
    1. 2h6f
      automatically matched to d1s63a_
      complexed with acy, far, suc, zn; mutant
      1. region a:55-369 [136185]
    2. 2h6h
      automatically matched to d1s63a_
      complexed with acy, far, suc, zn; mutant
      1. region a:55-369 [136188]
    3. 1tn6
      complexed with acy, fii, suc, zn; mutant
      1. chain a [112527]
    4. 2iej
      automatically matched to d1s63a_
      complexed with act, fii, s48, suc, zn
      1. region a:55-369 [137313]
    5. 1s63
      complexed with 778, fpp, suc, zn
      1. chain a [105285]
    6. 1ld8
      complexed with acy, fpp, suc, u49, zn
      1. chain a [73838]
    7. 2h6g
      automatically matched to d1s63a_
      complexed with ger, suc, zn; mutant
      1. region a:55-369 [136187]
    8. 1mzc
      complexed with bne, fpp, suc, zn
      1. chain a [85239]
    9. 1sa4
      complexed with fpp, jan, suc, zn
      1. chain a [105402]
    10. 1ld7
      complexed with fpp, suc, u66, zn
      1. chain a [73836]
    11. 1jcq
      complexed with 739, acy, fpp, suc, zn; mutant
      1. chain a [66504]
    12. 1tn7
      complexed with acy, fii, zn
      1. chain a [112529]
    13. 1tn8
      complexed with acy, fii, zn; mutant
      1. chain a [112531]
    14. 1tno
      complexed with cl, mes, mgm, zn
      1. chain a [112545]
      2. chain c [112547]
      3. chain e [112549]
      4. chain g [112551]
      5. chain i [112553]
      6. chain k [112555]
    15. 1tny
      complexed with cl, mes, mgm, zn
      1. chain a [112569]
      2. chain c [112571]
      3. chain e [112573]
      4. chain g [112575]
      5. chain i [112577]
      6. chain k [112579]
    16. 1tnu
      complexed with cl, mes, mgm, zn
      1. chain a [112557]
      2. chain c [112559]
      3. chain e [112561]
      4. chain g [112563]
      5. chain i [112565]
      6. chain k [112567]
    17. 1tnb
      complexed with cl, mes, mgm, zn
      1. chain a [112533]
      2. chain c [112535]
      3. chain e [112537]
      4. chain g [112539]
      5. chain i [112541]
      6. chain k [112543]
    18. 1tnz
      complexed with cl, mes, mgm, zn
      1. chain a [112581]
      2. chain c [112583]
      3. chain e [112585]
      4. chain g [112587]
      5. chain i [112589]
      6. chain k [112591]
    19. 2f0y
      automatically matched to d1s63a_
      complexed with 3mn, fpp, zn
      1. region a:55-368 [132681]
    20. 2h6i
      automatically matched to d1s63a_
      complexed with ger, suc, zn; mutant
      1. region a:55-369 [136189]
2. Rab geranylgeranyltransferase alpha-subunit, N-terminal domain [48443]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [48444] (2)
    1. 1dce
      complexed with zn
      1. region a:1-241,a:351-443 [19191]
      2. region c:1-241,c:351-443 [19192]
    2. 1ltx
      complexed with cl, far, zn2; mutant
      1. region a:24-241,a:351-443 [84711]