Structural Classification of Proteins
home mail help root up expand collapse

Fold: Triger factor/SurA peptide-binding domain-like

multihelical; irregular array of long and short helices

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Triger factor/SurA peptide-binding domain-like [109997]
    multihelical; irregular array of long and short helices

Superfamilies:

  1. Triger factor/SurA peptide-binding domain-like [109998] (2)
    there are sequence and functional similarities between the families, but their structural similarity is obscured by conformational flexibility (in the TF family)
    link to SUPERFAMILY database - Superfamily
    1. TF C-terminus [109999] (2)
      Pfam 05698; includes the upstream linker region not covered by the Pfam model
      1. Trigger factor, C-terminal domain [110000]
        1. Escherichia coli [TaxId: 562] [110001] (2)
          SQ P22257
          1. 1w26 picpicxrefxref
            1. region a:248-432 [109085] picpiclink
            2. region b:248-432 [109088] picpiclink
          2. 2vrh picpicxrefxrefxrefxrefxref
            automatically matched to d1w26a1
            1. region a:248-431 [153506] picpiclink
        2. Vibrio cholerae [TaxId: 666] [110002] (1)
          SQ Q9KQS5
          1. 1t11 picpicxrefxref
            1. region a:248-376 [106236] picpiclink
            2. region b:248-376 [106239] picpiclink
    2. Porin chaperone SurA, peptide-binding domain [81828] (1)
      1. Porin chaperone SurA, peptide-binding domain [81829]
        1. Escherichia coli [TaxId: 562] [81830] (3)
          1. 1m5y picpicxref
            1. region a:25-164,a:395-427 [78664] picpiclink
            2. region b:25-163,b:396-427 [78667] picpiclink
            3. region c:25-163,c:396-427 [78670] picpiclink
            4. region d:25-163,d:396-428 [78673] picpiclink
          2. 2pv3 picpicxrefxref
            automatically matched to d1m5yd1
            1. region a:25-163,a:396-427 [149882] picpiclink
          3. 2pv3 picpicxrefxref
            automatically matched to d1m5yd1
            1. region b:25-163,b:396-427 [149884] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk