Fold: Heme oxygenase-like

multihelical; bundle

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: Heme oxygenase-like [48612]
   multihelical; bundle

Superfamilies:

1. Heme oxygenase-like [48613] (4)
   duplication: contains two structural repeats of 3-helical motif
   uperfamily
   1. Eukaryotic type heme oxygenase [48614] (5)
      1. Heme oxygenase-1 (HO-1) [48615]
         1. Human (Homo sapiens) [TaxId: 9606] [48616] (26)
            SQ P09601
            1. 1n45
               complexed with hem, so4
               1. chain a [79981]
               2. chain b [79982]
            2. 1ozw
               complexed with hem, no; mutant
               1. chain a [93858]
               2. chain b [93859]
            3. 1ozl
               complexed with hem, no; mutant
               1. chain a [93848]
               2. chain b [93849]
            4. 3czy
               automatically matched to d1ni6c_
               complexed with ad8, hem
               1. region a:10-223 [157159]
            5. 3czy
               automatically matched to d1ni6c_
               complexed with ad8, hem
               1. region b:10-223 [157160]
            6. 1oyl
               complexed with hem; mutant
               1. chain a [93732]
               2. chain b [93733]
            7. 1ozr
               complexed with hem; mutant
               1. chain a [93855]
               2. chain b [93856]
            8. 1xjz
               complexed with hem; mutant
               1. region a:10-223 [122049]
            9. 1xjz
               automatically matched to 1XJZ A:10-223
               complexed with hem; mutant
               1. region b:10-223 [122050]
            10. 1xk3
                complexed with hem, no; mutant
                1. chain a [115400]
                2. chain b [115401]
            11. 1oze
                complexed with hem; mutant
                1. chain a [93819]
                2. chain b [93820]
            12. 1twn
                automatically matched to d1ni6c_
                complexed with ver
                1. region a:10-223 [119366]
            13. 1twn
                automatically matched to d1ni6c_
                complexed with ver
                1. region b:10-223 [119367]
            14. 1ni6
                heme-free structure
                complexed with cl, tre
                1. chain a [85734]
                2. chain b [85735]
                3. chain c [85736]
                4. chain d [85737]
            15. 1xk2
                complexed with hem; mutant
                1. chain a [115398]
                2. chain b [115399]
            16. 1xk0
                complexed with hem, no; mutant
                1. region a:10-223 [122051]
            17. 1xk0
                automatically matched to 1XK0 A:10-223
                complexed with hem, no; mutant
                1. region b:10-223 [122052]
            18. 1twr
                automatically matched to d1ni6c_
                complexed with no, ver
                1. region a:10-223 [119369]
            19. 1twr
                automatically matched to d1ni6c_
                complexed with no, ver
                1. region b:10-223 [119370]
            20. 1s8c
                complexed with bla
                1. chain a [105364]
                2. chain b [105365]
                3. chain c [105366]
                4. chain d [105367]
            21. 1s13
                complexed with 2fh
                1. chain a [105152]
                2. chain b [105153]
            22. 1xk1
                complexed with hem; mutant
                1. region a:10-223 [122053]
            23. 1xk1
                automatically matched to 1XK1 A:10-223
                complexed with hem; mutant
                1. region b:10-223 [122054]
            24. 1t5p
                complexed with 1fh
                1. chain a [106463]
                2. chain b [106464]
            25. 1n3u
                complexed with cl, hem
                1. chain a [79973]
                2. chain b [79974]
            26. 1oyk
                complexed with hem; mutant
                1. chain a [93730]
                2. chain b [93731]
         2. Rat (Rattus norvegicus) [TaxId: 10116] [48617] (13)
            SQ P06762 11-222
            1. 1j02
               complexed with hem, nmo
               1. chain a [90732]
            2. 1ix4
               complexed with cmo, hem
               1. chain a [90715]
            3. 2e7e
               automatically matched to d1dvga_
               complexed with cyn, hem
               1. region a:11-222 [132063]
            4. 1ivj
               complexed with azi, hem
               1. chain a [76844]
            5. 1vgi
               complexed with fmt, hem, xe
               1. chain a [108622]
            6. 1ulx
               complexed with cmo, hem
               1. chain a [107941]
            7. 1ix3
               complexed with cyn, hem
               1. chain a [90714]
            8. 1ubb
               complexed with hem
               1. chain a [99160]
            9. 1dvg
               complexed with hem; mutant
               1. chain a [19510]
               2. chain b [19511]
            10. 1j2c
                complexed with bla, fe
                1. chain a [90780]
            11. 1dve
                complexed with hem
                1. chain a [19512]
            12. 2dy5
                automatically matched to d1dvga_
                complexed with 224, cl, hem
                1. region a:10-223 [131890]
            13. 1irm
                1. chain a [71347]
                2. chain b [71348]
                3. chain c [71349]
         3. Synechocystis sp. [TaxId: 1143] [117032] (1)
            SQ P72849 2-223
            1. 1we1
               complexed with cl, hem, ioh, po4
               1. chain a [114542]
               2. chain b [114543]
               3. chain c [114544]
               4. chain d [114545]
      2. Heme oxygenase HmuO [89159]
         1. Corynebacterium diphtheriae [TaxId: 1717] [89160] (14)
            SQ P71119
            1. 1wzd
               automatically matched to d1iw1a_
               complexed with gol, so4, yok
               1. region a:7-213 [121493]
            2. 1wzd
               automatically matched to d1iw1a_
               complexed with gol, so4, yok
               1. region b:7-213 [121494]
            3. 1iw0
               complexed with hem, so4, suc
               1. chain a [83720]
               2. chain b [83721]
               3. chain c [83722]
            4. 1iw1
               complexed with hem, so4, suc
               1. chain a [83723]
               2. chain b [83724]
               3. chain c [83725]
            5. 2z68
               automatically matched to d1iw1a_
               complexed with na, so4, til
               1. region a:7-213 [154174]
            6. 2z68
               automatically matched to d1iw1a_
               complexed with na, so4, til
               1. region b:7-213 [154175]
            7. 1wnx
               complexed with hem, na, so4; mutant
               1. chain a [114768]
               2. chain b [114769]
            8. 1v8x
               complexed with hem, oxy, so4, suc
               1. chain a [108432]
               2. chain b [108433]
               3. chain c [108434]
            9. 1wnw
               complexed with hem, iod, na, so4; mutant
               1. chain a [114765]
               2. chain b [114766]
               3. chain c [114767]
            10. 1wzg
                automatically matched to d1iw1a_
                complexed with gol, so4, yom
                1. region a:7-213 [121501]
            11. 1wzg
                automatically matched to d1iw1a_
                complexed with gol, so4, yom
                1. region b:7-213 [121502]
            12. 1wnv
                complexed with hem, so4; mutant
                1. chain a [114762]
                2. chain b [114763]
                3. chain c [114764]
            13. 1wzf
                automatically matched to d1iw1a_
                complexed with gol, so4, yol
                1. region a:7-213 [121499]
            14. 1wzf
                automatically matched to d1iw1a_
                complexed with gol, so4, yol
                1. region b:7-213 [121500]
      3. Heme oxygenase 2 [140948]
         1. Synechocystis sp. pcc 6803 [TaxId: 1148] [140949] (6)
            SQ P74133 2-250
            1. 1wov
               complexed with hem
               1. region a:2-250 [121124]
            2. 1wov
               automatically matched to 1WOV A:2-250
               complexed with hem
               1. region b:2-250 [121125]
            3. 1wox
               automatically matched to 1WOV A:2-250
               complexed with hem, no
               1. region a:2-250 [121128]
            4. 1wox
               automatically matched to 1WOV A:2-250
               complexed with hem, no
               1. region b:2-250 [121129]
            5. 1wow
               automatically matched to 1WOV A:2-250
               complexed with hem
               1. region a:2-250 [121126]
            6. 1wow
               automatically matched to 1WOV A:2-250
               complexed with hem
               1. region b:2-250 [121127]
   2. Heme oxygenase HemO (PigA) [63627] (2)
      1. Heme oxygenase HemO (PigA) [63628]
         gram-negative bacterial heme oxygenase/iron-starvation protein
         1. Neisseria meningitidis [TaxId: 487] [63629] (4)
            1. 1j77
               complexed with hem
               1. chain a [62674]
            2. 1p3u
               complexed with hem, no
               1. chain a [94069]
            3. 1p3t
               complexed with hem
               1. chain a [94068]
            4. 1p3v
               complexed with cmo, hem
               1. chain a [94070]
         2. Pseudomonas aeruginosa [TaxId: 287] [110027] (1)
            SQ O69002
            1. 1sk7
               complexed with hem, so4
               1. chain a [105671]
   3. TENA/THI-4 [101458] (8)
      Pfam 03070; HO-related family lacking the heme-binding site
      1. Putative transcriptional activator PF1337 [101459]
         1. Archaeon Pyrococcus furiosus [TaxId: 2261] [101460] (1)
            1. 1rtw
               structural genomics; NESG target PRF34
               complexed with mp5, po4
               1. chain a [97823]
               2. chain b [97824]
               3. chain c [97825]
               4. chain d [97826]
      2. Seed maturation protein-related At3g16990 [101461]
         1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [101462] (4)
            structural genomics
            1. 2f2g
               automatically matched to d1q4mb_
               complexed with hmh, so4
               1. region a:5-219 [132816]
            2. 2f2g
               automatically matched to d1q4mb_
               complexed with hmh, so4
               1. region b:5-219 [132817]
            3. 2q4x
               automatically matched to d1q4mb_
               complexed with hmh, so4
               1. region a:5-219 [139880]
            4. 2q4x
               automatically matched to d1q4mb_
               complexed with hmh, so4
               1. region b:5-219 [139881]
      3. Hypothetical transcriptional regulator PH1161 [110028]
         1. Pyrococcus horikoshii [TaxId: 53953] [110029] (1)
            SQ O58873
            1. 1udd
               1. chain a [107776]
               2. chain b [107777]
               3. chain c [107778]
               4. chain d [107779]
      4. Transcriptional activator TenA [110030]
         1. Bacillus subtilis [TaxId: 1423] [110031] (10)
            SQ P25052
            1. 1to9
               complexed with hmh
               1. chain a [107172]
               2. chain b [107173]
            2. 1yak
               automatically matched to d1to9a_
               complexed with hmh
               1. region a:2-220 [122833]
            3. 1yak
               automatically matched to d1to9a_
               complexed with hmh
               1. region b:2-219 [122834]
            4. 1yak
               automatically matched to d1to9a_
               complexed with hmh
               1. region c:3-220 [122835]
            5. 1yak
               automatically matched to d1to9a_
               complexed with hmh
               1. region d:2-220 [122836]
            6. 1yaf
               automatically matched to d1to9a_
               1. region a:2-220 [122814]
            7. 1yaf
               automatically matched to d1to9a_
               1. region b:2-220 [122815]
            8. 1yaf
               automatically matched to d1to9a_
               1. region c:2-219 [122816]
            9. 1yaf
               automatically matched to d1to9a_
               1. region d:2-219 [122817]
            10. 1tyh
                1. chain a [107458]
                2. chain b [107459]
                3. chain d [107460]
                4. chain e [107461]
      5. Hypothetical protein TTHA0169 (TT2028) [140950]
         1. Thermus thermophilus [TaxId: 274] [140951] (2)
            SQ Q5SLX4 9-188
            1. 1wwm
               1. region a:11-190 [121363]
            2. 1wwm
               automatically matched to 1WWM A:11-190
               1. region b:13-190 [121364]
      6. TenA homolog PAE0170 [140952]
         1. Archaeon Pyrobaculum aerophilum [TaxId: 13773] [140953] (8)
            SQ Q8ZZM9 2-212
            1. 2gm8
               automatically matched to 2GM7 A:2-212
               complexed with edo, hmh
               1. region a:2-212 [135368]
            2. 2gm8
               automatically matched to 2GM7 A:2-212
               complexed with edo, hmh
               1. region b:2-212 [135369]
            3. 2gm8
               automatically matched to 2GM7 A:2-212
               complexed with edo, hmh
               1. region c:2-212 [135370]
            4. 2gm8
               automatically matched to 2GM7 A:2-212
               complexed with edo, hmh
               1. region d:2-212 [135371]
            5. 2gm7
               complexed with gol, pe4, po4
               1. region a:2-212 [135364]
            6. 2gm7
               automatically matched to 2GM7 A:2-212
               complexed with gol, pe4, po4
               1. region b:2-212 [135365]
            7. 2gm7
               automatically matched to 2GM7 A:2-212
               complexed with gol, pe4, po4
               1. region c:2-212 [135366]
            8. 2gm7
               automatically matched to 2GM7 A:2-212
               complexed with gol, pe4, po4
               1. region d:2-212 [135367]
      7. Putative transcriptional regulator SP0716 (SPr0628) [140954]
         1. Streptococcus pneumoniae [TaxId: 1313] [140955] (3)
            SQ Q97RS7 3-221
            1. 1z72
               automatically matched to 2A6B A:3-221
               complexed with acy, mg
               1. region a:4-220 [124583]
            2. 1z72
               automatically matched to 2A6B A:3-221
               complexed with acy, mg
               1. region b:3-220 [124584]
            3. 2a6b
               1. region a:3-221 [126235]
      8. Hypothetical protein BT3146 [140956]
         1. Bacteroides thetaiotaomicron [TaxId: 818] [140957] (9)
            SQ Q8A309 10-240
            1. 2a2m
               complexed with act, edo
               1. region a:10-240 [126039]
            2. 2a2m
               automatically matched to 2A2M A:10-240
               complexed with act, edo
               1. region b:10-240 [126040]
            3. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region a:10-239 [126044]
            4. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region b:10-239 [126045]
            5. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region c:10-239 [126046]
            6. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region d:11-239 [126047]
            7. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region e:10-239 [126048]
            8. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region f:11-239 [126049]
            9. 2a2o
               automatically matched to 2A2M A:10-240
               complexed with edo, k
               1. region g:10-239 [126050]
   4. PqqC-like [101463] (2)
      Pfam 05312
      1. Coenzyme PQQ synthesis protein C, PqqC [101464]
         1. Klebsiella pneumoniae [TaxId: 573] [101465] (2)
            1. 1otv
               mutant
               1. chain a [93526]
               2. chain b [93527]
            2. 1otw
               complexed with peo, pqq; mutant
               1. chain a [93528]
               2. chain b [93529]
      2. Hypothetical protein CT610 [101466]
         contains a di-iron centre similar to that of the ferritin-like superfamily
         1. Chlamydia trachomatis [TaxId: 813] [101467] (1)
            1. 1rcw
               complexed with fe
               1. chain a [97299]
               2. chain b [97300]
               3. chain c [97301]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk