Family: Atu0492-like

duplication: similar subunit structure to the AhpD family, but the putative active site is conserved in different relative location; new hexameric architecture; similar dimeric interface to the CMD-like family

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: AhpD-like [69117]
   multihelical; contains 4-helical bundle and 2-helical arm
4. Superfamily: AhpD-like [69118]
   probable biological unit contains six domains of this fold arranged with 32 symmetry
   uperfamily
5. Family: Atu0492-like [140970]
   duplication: similar subunit structure to the AhpD family, but the putative active site is conserved in different relative location; new hexameric architecture; similar dimeric interface to the CMD-like family

Protein Domains:

1. Hypothetical protein Atu0492 [140971]
   1. Agrobacterium tumefaciens [TaxId: 358] [140972] (6)
      SQ Q8UI08 2-148
      1. 2gmy
         1. region a:2-148 [135398]
      2. 2gmy
         automatically matched to 2GMY A:2-148
         1. region b:2-146 [135399]
      3. 2gmy
         automatically matched to 2GMY A:2-148
         1. region c:2-147 [135400]
      4. 2gmy
         automatically matched to 2GMY A:2-148
         1. region d:2-146 [135401]
      5. 2gmy
         automatically matched to 2GMY A:2-148
         1. region e:2-146 [135402]
      6. 2gmy
         automatically matched to 2GMY A:2-148
         1. region f:2-148 [135403]
2. Hypothetical protein PA0269 [140973]
   1. Pseudomonas aeruginosa [TaxId: 287] [140974] (10)
      SQ Q9I6M1 2-144! SQ Q9I6M1 2-145
      1. 2o4d
         1. region a:2-145 [138907]
      2. 2ijc
         1. region a:2-144 [137465]
      3. 2ijc
         automatically matched to 2IJC A:2-144
         1. region b:3-144 [137466]
      4. 2ijc
         automatically matched to 2IJC A:2-144
         1. region c:3-144 [137467]
      5. 2ijc
         automatically matched to 2IJC A:2-144
         1. region d:3-144 [137468]
      6. 2ijc
         automatically matched to 2IJC A:2-144
         1. region e:3-144 [137469]
      7. 2ijc
         automatically matched to 2IJC A:2-144
         1. region f:2-144 [137470]
      8. 2ijc
         automatically matched to 2IJC A:2-144
         1. region g:3-144 [137471]
      9. 2ijc
         automatically matched to 2IJC A:2-144
         1. region h:3-144 [137472]
      10. 2ijc
          automatically matched to 2IJC A:2-144
          1. region i:2-144 [137473]
3. Uncharacterized protein Dgeo_1446 [158821]
   1. Deinococcus geothermalis [TaxId: 68909] [158822] (2)
      SQ Q1IYE3 10-195
      1. 2oyo
         complexed with mpd
         1. region a:10-195 [149068]
      2. 2oyo
         automatically matched to 2OYO A:10-195
         complexed with mpd
         1. region b:10-195 [149069]
4. Uncharacterized protein TM1040_2465 [158823]
   1. Silicibacter sp. tm1040 [TaxId: 292414] [158824] (2)
      SQ Q1GDR9 1-190
      1. 2pfx
         complexed with act, cl, pg4
         1. region a:1-190 [149452]
      2. 2pfx
         automatically matched to 2PFX A:1-190
         complexed with act, cl, pg4
         1. region b:1-190 [149453]
5. Uncharacterized protein Reut_A2532 [158825]
   1. Ralstonia eutropha [TaxId: 106590] [158826] (12)
      SQ Q46Y90 5-194
      1. 2prr
         complexed with peg, pge
         1. region a:5-194 [149803]
      2. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region b:5-194 [149804]
      3. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region c:5-193 [149805]
      4. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region d:5-193 [149806]
      5. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region e:5-194 [149807]
      6. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region f:5-194 [149808]
      7. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region g:5-193 [149809]
      8. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region h:5-194 [149810]
      9. 2prr
         automatically matched to 2PRR A:5-194
         complexed with peg, pge
         1. region i:5-193 [149811]
      10. 2prr
          automatically matched to 2PRR A:5-194
          complexed with peg, pge
          1. region j:5-192 [149812]
      11. 2prr
          automatically matched to 2PRR A:5-194
          complexed with peg, pge
          1. region k:5-193 [149813]
      12. 2prr
          automatically matched to 2PRR A:5-194
          complexed with peg, pge
          1. region l:5-193 [149814]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk