Structural Classification of Proteins
Fold: Phospholipase A2, PLA2
common core: 2 helices, disulfide-linked, and a calcium-binding loop
Lineage:
Root:
scop
Class:
All alpha proteins
[46456]
Fold:
Phospholipase A2, PLA2
[48618]
common core: 2 helices, disulfide-linked, and a calcium-binding loop
Superfamilies:
Phospholipase A2, PLA2
[48619] (3)
uperfamily
Vertebrate phospholipase A2
[48623] (39)
Snake phospholipase A2 [48624]
Taiwan cobra (Naja naja atra)
[TaxId: 8656]
[48625] (2)
1poa
complexed with ca
chain a
[19514]
1pob
complexed with ca, gel
chain a
[19515]
chain b
[19516]
Indian cobra (Naja naja)
[TaxId: 35670]
[48626] (5)
1a3d
complexed with na
chain a
[19517]
1psh
complexed with ca
chain a
[19518]
chain b
[19519]
chain c
[19520]
1a3f
chain a
[19521]
chain b
[19522]
chain c
[19523]
1xxw
automatically matched to d1a3d__
complexed with acy, zn
region a:1-120
[122431]
1xxw
automatically matched to d1a3d__
complexed with acy, zn
region b:1-119
[122432]
Indian cobra (Naja naja), a C49 isoform 2
[TaxId: 35670]
[89166] (1)
1ows
zinc containing heterodimer of two different isoforms
complexed with nag, zn
chain a
[87491]
Indian cobra (Naja naja), isoform 3
[TaxId: 35670]
[89167] (1)
1ows
zinc containing heterodimer of two different isoforms
complexed with nag, zn
chain b
[87492]
Andaman cobra (Naja sagittifera), acidic isoform 1
[TaxId: 195058]
[89168] (1)
1sz8
complexed with acy, ca, po4
chain a
[99044]
Andaman cobra (Naja sagittifera), isoform 2
[TaxId: 195058]
[89169] (2)
heterodimer of two different isoforms
1s6b
heterodimer of two different isoforms
complexed with acy, ca, po4
chain a
[98592]
1mh2
zinc containing heterodimer of two different isoforms
complexed with acy, zn
chain a
[84960]
Andaman cobra (Naja sagittifera), isoform 3
[TaxId: 195058]
[89170] (2)
heterodimer of two different isoforms
1s6b
heterodimer of two different isoforms
complexed with acy, ca, po4
chain b
[98593]
1mh2
zinc containing heterodimer of two different isoforms
complexed with acy, zn
chain b
[84961]
Andaman cobra (Naja sagittifera), isoform 4
[TaxId: 195058]
[89171] (7)
SQ
P60045
8-126 # ! yet another isoform, 98% identity
1yxl
automatically matched to d1oxra_
complexed with acy, ca, po4
region a:1-120
[124191]
1ln8
complexed with ca, po4
chain a
[84634]
1oxr
complexed with aspirin
complexed with ain, ca
chain a
[93714]
1mf4
complexed with a designed peptide inhibitor
complexed with ca
chain a
[91261]
1td7
complexed with ca, nfl
chain a
[106771]
1zm6
automatically matched to d1t37a_
complexed with act
region a:1-120
[125335]
1t37
complexed with act
chain a
[99116]
Andaman cobra (Naja sagittifera), calcium-free isoform 5
[TaxId: 195058]
[89172] (2)
1mh8
possibly another isoform with isoleucine at second position
chain a
[84963]
1mh7
chain a
[84962]
King cobra (Ophiophagus hannah)
[TaxId: 8665]
[81939] (1)
1gp7
complexed with ca
chain a
[76251]
chain b
[76252]
chain c
[76253]
King cobra (Ophiophagus hannah), an acidic isoform
[TaxId: 8665]
[101482] (1)
1m8t
complexed with ca, hez
chain a
[91227]
chain b
[91228]
chain c
[91229]
chain d
[91230]
chain e
[91231]
chain f
[91232]
Western diamondback rattlesnake (Crotalus atrox)
[TaxId: 8730]
[48627] (1)
1pp2
chain r
[19524]
chain l
[19525]
Snake (Agkistrodon halys)
[TaxId: 8714]
[48628] (9)
1m8r
complexed with bu1, cd
chain a
[78812]
1psj
complexed with ca
chain a
[19526]
1bk9
complexed with bu1, ca, pbp
chain a
[19527]
1m8s
complexed with bu1, cd
chain a
[78813]
1jia
complexed with ca
chain a
[19528]
chain b
[19529]
1b4w
chain a
[19536]
chain b
[19537]
chain c
[19538]
chain d
[19539]
1bjj
complexed with ca
chain a
[19530]
chain b
[19531]
chain c
[19532]
chain d
[19533]
chain e
[19534]
chain f
[19535]
1c1j
complexed with bog, cd
chain a
[70061]
chain b
[70062]
chain c
[70063]
chain d
[70064]
1a2a
complexed with cl
chain a
[19540]
chain b
[19541]
chain c
[19542]
chain d
[19543]
chain e
[19544]
chain f
[19545]
chain g
[19546]
chain h
[19547]
Eastern cottonmouth snake (Agkistrodon piscivorus piscivorus)
[TaxId: 8716]
[48629] (2)
1vap
chain a
[19548]
chain b
[19549]
1ppa
complexed with anl
chain a
[19550]
Broad-banded copperhead (Agkistrodon contortrix laticinctus)
[TaxId: 37195]
[101483] (3)
1s8i
complexed with so4
chain a
[98735]
1s8h
complexed with so4
chain a
[98734]
1s8g
complexed with gol, lau, so4
chain a
[98733]
Viper (Deinagkistrodon acutus)
[TaxId: 36307]
[69122] (1)
1ijl
complexed with ca, zn
chain a
[66163]
chain b
[66164]
Snake (Daboia russellii pulchella), different isoforms
[TaxId: 97228]
[48630] (57)
SQ
P59071
2g58
automatically matched to d1cl5a_
complexed with phq, so4
region a:1-133
[134645]
1zwp
automatically matched to d1cl5a_
complexed with moh, nim, so4
region a:1-133
[125749]
1tk4
complexed with so4
chain a
[107073]
1tj9
complexed with acy, so4
chain a
[107015]
1skg
complexed with moh, so4
chain a
[98901]
1sxk
complexed with bha, so4
chain a
[99027]
2oyf
automatically matched to d1cl5a_
complexed with acy, iac, so4
region a:1-133
[139432]
1sqz
complexed with cbz, so4
chain a
[98975]
1tjq
complexed with cbz, moh, so4
chain a
[107049]
1tg1
complexed with acy, cbz, moh, so4
chain a
[106888]
1th6
complexed with oin, so4
chain a
[106907]
2arm
automatically matched to d1cl5a_
complexed with oin, so4
region a:1-133
[127208]
1tjk
complexed with so4
chain a
[107026]
1sv3
complexed with ann, so4
chain a
[99015]
2dv8
automatically matched to d1cl5a_
complexed with imn, so4
region a:1-133
[131764]
2q1p
automatically matched to d1cl5a_
complexed with pol, so4
region a:1-133
[139787]
2pyc
automatically matched to d1cl5a_
complexed with act, ccn, so4
region a:1-133
[139780]
1fv0
complexed with aristolochic acid
complexed with 9ar, act, cry, dox, so4
chain a
[70147]
chain b
[70148]
1tg4
complexed with so4
chain a
[106889]
1tdv
complexed with so4
chain a
[106786]
1q7a
complexed with moh, opb, so4
chain a
[96025]
1oxl
complexed with co3, ida, so4
chain a
[93702]
chain b
[93703]
1kpm
complexed with vitamin E
complexed with acy, vit
chain a
[72844]
chain b
[72845]
1jq9
complexed with a designed peptide inhibitor, chain P
complexed with acy
chain a
[77149]
chain b
[77150]
2qvd
automatically matched to d1cl5a_
complexed with ber
region a:1-133
[151387]
1tgm
complexed with ain, ca, so4
chain a
[106900]
1q6v
complexed with so4
chain a
[95999]
2otf
automatically matched to d1cl5a_
complexed with 2tn
region a:1-133
[139312]
1jq8
complexed with a designed peptide inhibitor, chain P
complexed with acy, so4
chain a
[77147]
chain b
[77148]
1zyx
automatically matched to d1cl5a_
complexed with lcf, so4
region a:1-133
[125870]
1zr8
automatically matched to d1cl5a_
complexed with acy, ajm, so4
region a:1-133
[125528]
2qu9
automatically matched to d1cl5a_
complexed with eug, so4
region a:1-133
[151367]
2pb8
automatically matched to d1cl5a_
complexed with act
region a:1-133
[139646]
2qhw
automatically matched to d1cl5a_
complexed with pzz
region a:1-133
[150795]
2oli
automatically matched to d1cl5a_
complexed with iop
region a:1-133
[139137]
2dpz
automatically matched to d1cl5a_
complexed with so4, tyl
region a:1-133
[131618]
1fb2
chain a
[59758]
chain b
[59759]
2pws
automatically matched to d1cl5a_
complexed with ibp
region a:1-133
[139765]
2pmj
automatically matched to d1cl5a_
complexed with ccn, cou
region a:1-133
[139741]
2que
automatically matched to d1cl5a_
complexed with ajm, ann
region a:1-133
[151368]
2gns
automatically matched to d1cl5a_
complexed with so4
region a:1-133
[135416]
1tp2
complexed with acy, so4, tda
chain a
[107181]
chain b
[107182]
1oyf
complexed with acy, mhn, so4
chain a
[87595]
chain b
[87596]
1y38
automatically matched to d1cl5a_
complexed with g3p, na, pge, so4
region a:1-133
[122580]
1y38
automatically matched to d1cl5a_
complexed with g3p, na, pge, so4
region b:1-133
[122581]
2zbh
automatically matched to d1cl5a_
complexed with bvl
region a:1-133
[154321]
2o1n
automatically matched to d1cl5a_
region a:1-133
[138874]
1sv9
complexed with dif
chain a
[99021]
2b17
automatically matched to d1cl5a_
complexed with dif, so4
region a:1-133
[127661]
1cl5
complexed with vitamin E
chain a
[19551]
chain b
[19552]
2fnx
automatically matched to d1cl5a_
complexed with so4
region a:1-133
[133833]
2oub
automatically matched to d1cl5a_
complexed with 2tn
region a:1-133
[139377]
2oth
automatically matched to d1cl5a_
complexed with ccn, imn, nim
region a:1-133
[139313]
3cbi
automatically matched to d1cl5a_
complexed with ajm, ann
region a:1-133
[156155]
3cbi
automatically matched to d1cl5a_
complexed with ajm, ann
region b:1-133
[156156]
3cbi
automatically matched to d1cl5a_
complexed with ajm, ann
region c:1-133
[156157]
3cbi
automatically matched to d1cl5a_
complexed with ajm, ann
region d:1-133
[156158]
Mainland tiger snake (Notechis scutatus scutatus), notexin
[TaxId: 8663]
[48631] (1)
presynaptic neurotoxic phospholipase A2
1ae7
complexed with so4
chain a
[19553]
Mainland tiger snake (Notechis scutatus scutatus), notechis II-5
[TaxId: 8663]
[48632] (1)
neurotoxic phospholipase a2
2not
chain a
[19554]
chain b
[19555]
Bothrops pirajai, Piratoxin-II (PRTX-II)
[TaxId: 113192]
[48633] (1)
1qll
complexed with tda
chain a
[19556]
chain b
[19557]
Russell's viper (Vipera russelli)
[TaxId: 8707]
[48634] (1)
anticoagulant class II phospholipase A2
1vip
complexed with so4
chain a
[19558]
Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor
[TaxId: 8704]
[88517] (8)
1jlt
complex with catalytic subunit
complexed with mpd
chain a
[66867]
1vpi
chain a
[19559]
1aok
complex with catalytic subunit
complexed with act
chain a
[19560]
1q5t
complexed with so4
chain a
[95932]
chain b
[95933]
1rgb
automatically matched to d1vpi__
complexed with eld
region a:1-133
[118769]
1rgb
automatically matched to d1vpi__
complexed with eld
region b:1-133
[118770]
1rgb
automatically matched to d1vpi__
complexed with eld
region k:1-133
[118771]
1rgb
automatically matched to d1vpi__
complexed with eld
region l:1-133
[118772]
Sand viper (Vipera ammodytes meridionalis), vipoxin catalytic subunit
[TaxId: 8704]
[88518] (2)
1jlt
complex with inhibitory subunit
complexed with mpd
chain b
[66868]
1aok
complex with inhibitory subunit
complexed with act
chain b
[19561]
Siamese russell's viper (Daboia russelli siamensis), RV7 inhibitory subunit
[TaxId: 343250]
[101484] (1)
1oqs
complex with catalytic subunit
chain a
[93427]
chain c
[93429]
chain e
[93431]
chain g
[93433]
Siamese russell's viper (Daboia russelli siamensis), RV4 catalytic subunit
[TaxId: 343250]
[101485] (1)
1oqs
complex with inhibitory subunit
chain b
[93428]
chain d
[93430]
chain f
[93432]
chain h
[93434]
Saw-scaled viper (Echis carinatus)
[TaxId: 40353]
[101486] (1)
1oz6
complexed with ca
chain a
[93805]
Indian krait (Bungarus caeruleus), different isoforms
[TaxId: 132961]
[48636] (8)
SQ
Q6SLM1
# fragment; SQ
Q9DF52
28-145 # ! 74% sequence identity
1u4j
complexed with acy, cl, man, na
chain a
[107673]
chain b
[107674]
1g0z
complexed with cl; mutant
chain a
[83263]
chain b
[83264]
1g2x
trimeric isoform
chain a
[83265]
chain b
[83266]
chain c
[83267]
1fe5
complexed with ca
chain a
[19563]
1dpy
complexed with na
chain a
[19562]
2osn
automatically matched to d1g2xa_
complexed with cl
region a:3-120
[139300]
1tc8
complexed with na, tda
chain a
[106758]
1po8
complexed with na, shv
chain a
[94966]
Hundred-pace snake (Agkistrodon acutus)
[TaxId: 36307]
[74796] (2)
monomeric Lys-49 phospholipase A2 homologue
1mc2
complexed with ipa
chain a
[74622]
1mg6
chain a
[79091]
Many-banded krait (Bungarus multicinctus), beta2-bungarotoxin
[TaxId: 8616]
[48642] (1)
1bun
complexed with na
chain a
[19614]
Jararacussu (Bothrops jararacussu)
[TaxId: 8726]
[101487] (4)
SQ
Q8AXY1
17-138
1zlb
automatically matched to d1umvx_
region a:1-122
[125248]
1zl7
automatically matched to d1umvx_
complexed with ca, gol
region a:1-122
[125237]
1umv
acidic, non-myotoxic phospholipase A2
complexed with ca
chain x
[99630]
1u73
chain a
[113075]
chain b
[113076]
Terciopelo (Bothrops asper), myotoxin I
[TaxId: 8722]
[48644] (3)
1y4l
automatically matched to d1clpa_
complexed with ipa, p33, svr
region a:1-133
[122624]
1y4l
automatically matched to d1clpa_
complexed with ipa, p33, svr
region b:1-133
[122625]
1clp
mutant
chain a
[19615]
chain b
[19616]
Cerrophidion godmani, formerly Bothrops godmani
[TaxId: 44722]
[48645] (1)
Monomeric Lys-49 phospholipase A2 homologue
1god
chain a
[19617]
Snake (Bothrops pirajai), piratoxin III
[TaxId: 113192]
[69123] (1)
SQ
Q9IAT9
; Asp-49 phospholipase A2 homologue
1gmz
complexed with ioh
chain a
[65356]
chain b
[65357]
Neuwied's lancehead (Bothrops neuwiedi pauloensis), different isoforms
[TaxId: 95649]
[110032] (2)
1pa0
chain a
[104097]
chain b
[104098]
1pc9
chain a
[104107]
chain b
[104108]
Small-eye snake (Micropechis ikaheka), different isoforms
[TaxId: 66188]
[110033] (2)
SQ
Q8JFB2
# 65% sequence identity
1p7o
chain a
[104076]
chain b
[104077]
chain c
[104078]
chain d
[104079]
chain e
[104080]
chain f
[104081]
1ozy
complexed with so4
chain a
[104047]
chain b
[104048]
Phospholipase A2 [48637]
Human (Homo sapiens), synovial fluid
[TaxId: 9606]
[48638] (12)
1n28
complexed with ca; mutant
chain a
[91550]
chain b
[91551]
1kvo
complexed with ca, oap
chain a
[19564]
chain b
[19565]
chain c
[19566]
chain d
[19567]
chain e
[19568]
chain f
[19569]
1kqu
complexed with br4, ca
chain a
[91023]
1pod
complexed with ca
chain a
[19570]
1j1a
complexed with bhp, ca
chain a
[83961]
chain b
[83962]
1poe
complexed with ca, gel
chain a
[19571]
chain b
[19572]
1db4
chain a
[19574]
1bbc
chain a
[19573]
1ayp
complexed with ca, inb
chain a
[19575]
chain b
[19576]
chain c
[19577]
chain d
[19578]
chain e
[19579]
chain f
[19580]
1dcy
chain a
[19582]
1n29
complexed with ca; mutant
chain a
[91552]
1db5
chain a
[19581]
Cow (Bos taurus), pancreas
[TaxId: 9913]
[48639] (26)
SQ
P00593
1g4i
complexed with ca, cl, mpd
chain a
[60241]
1vl9
complexed with ca, cl, mpd; mutant
chain a
[113665]
2bax
automatically matched to d1c74a_
complexed with ca, cl, mpd, mrd; mutant
region a:1-123
[128250]
1une
complexed with ca
chain a
[19583]
1vkq
complexed with ca, cl, mpd; mutant
chain a
[108688]
4bp2
complexed with ca, mpd
chain a
[19584]
1bp2
complexed with ca, mpd
chain a
[19585]
1o3w
complexed with ca, mpd; mutant
chain a
[86616]
1gh4
complexed with ca, mpd; mutant
chain a
[60516]
1mkt
complexed with ca; mutant
chain a
[19587]
1bpq
complexed with ca; mutant
chain a
[19588]
2bpp
complexed with ca
chain a
[19589]
1c74
complexed with ca; mutant
chain a
[19593]
1ceh
complexed with ca; mutant
chain a
[19591]
1mkv
complexed with ca, gel
chain a
[19592]
1mku
complexed with ca; mutant
chain a
[19590]
1kvx
complexed with ca; mutant
chain a
[19597]
1fdk
complexed with ca, gle
chain a
[19596]
1irb
complexed with ca; mutant
chain a
[19586]
1mks
complexed with ca; mutant
chain a
[19594]
1kvy
complexed with ca; mutant
chain a
[19595]
1kvw
complexed with ca; mutant
chain a
[19598]
3bp2
complexed with ca, pvl
chain a
[19599]
1o2e
complexed with ann, ca; mutant
chain a
[92406]
2bp2
chain a
[19600]
1bvm
chain a
[19601]
Pig (Sus scrofa), pancreas
[TaxId: 9823]
[48640] (19)
1hn4
complexed with ca, mji, so4
chain a
[65893]
chain b
[65894]
2azy
automatically matched to d1hn4b_
complexed with ca, chd
region a:1-124
[127618]
2b00
automatically matched to d1hn4b_
complexed with ca, gch
region a:1-124
[127620]
1l8s
complexed with act, ca, lpe, na, po4
chain a
[77811]
chain b
[77812]
1fxf
complexed with ca, mji, po4
chain a
[60102]
chain b
[60103]
2b01
automatically matched to d1hn4b_
complexed with ca, cl, tud
region a:1-124
[127621]
1fx9
complexed with ca, mji, so4
chain a
[60100]
chain b
[60101]
2azz
automatically matched to d1hn4b_
complexed with ca, cl, tch
region a:1-124
[127619]
2phi
complexed with ca; mutant
chain a
[19602]
chain b
[19603]
2b03
automatically matched to d1hn4b_
complexed with ca, tud
region a:1-124
[127622]
2b04
automatically matched to d1hn4b_
complexed with ca, cho, cl
region a:1-124
[127623]
3p2p
complexed with ca; mutant
chain a
[19607]
chain b
[19608]
5p2p
complexed with ca, dhg; mutant
chain a
[19605]
chain b
[19606]
4p2p
complexed with ca
chain a
[19604]
1p2p
complexed with ca
chain a
[19609]
1pis
complexed with ca
chain a
[19610]
1sfw
complexed with ca
chain a
[19612]
1pir
complexed with ca
chain a
[19611]
1sfv
complexed with ca
chain a
[19613]
Human (Homo sapiens), SPLA2
[TaxId: 9606]
[74797] (2)
group X secretory phospholipase A2
1le6
complexed with ca, mpd
chain a
[73862]
chain b
[73863]
chain c
[73864]
1le7
complexed with ca, mpd
chain a
[73865]
chain b
[73866]
Insect phospholipase A2
[48620] (1)
Phospholipase A2 [48621]
European honeybee (Apis mellifera)
[TaxId: 7460]
[48622] (1)
1poc
complexed with ca, gel
chain a
[19513]
Prokaryotic phospholipase A2
[63630] (1)
Prokaryotic phospholipase A2 [63631]
Streptomyces violaceoruber
[TaxId: 1935]
[63632] (5)
1lwb
atomic resolution structure
chain a
[84728]
1faz
chain a
[59757]
1kp4
Calcium-bound form
complexed with ca
chain a
[77479]
1it4
complexed with ca
chain a
[76781]
1it5
chain a
[76782]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk