Structural Classification of Proteins
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Superfamily: Domain of the SRP/SRP receptor G-proteins

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Four-helical up-and-down bundle [47161]
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. Superfamily: Domain of the SRP/SRP receptor G-proteins [47364]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Domain of the SRP/SRP receptor G-proteins [47365] (7)
    1. Signal sequence recognition protein Ffh [47366]
      1. Thermus aquaticus [TaxId: 271] [47367] (25)
        1. 1ls1 picpicxref
          complexed with mo5, oxy
          1. region a:1-88 [78170] picpiclink
        2. 2j45 picpicxrefxref
          automatically matched to d2ffha1
          complexed with ca, edo, mes, mrd, na
          1. region a:1-88 [137983] picpiclink
        3. 2j45 picpicxrefxref
          automatically matched to d2ffha1
          complexed with ca, edo, mes, mrd, na
          1. region b:1-88 [137985] picpiclink
        4. 2j46 picpicxrefxref
          automatically matched to d2ffha1
          complexed with act, cl, mn, mrd
          1. region a:1-88 [137987] picpiclink
        5. 2j46 picpicxrefxref
          automatically matched to d2ffha1
          complexed with act, cl, mn, mrd
          1. region b:1-88 [137989] picpiclink
        6. 2c04 picpicxrefxref
          automatically matched to d2ffha1
          complexed with ca, gcp
          1. region a:1-88 [129570] picpiclink
        7. 2c04 picpicxrefxref
          automatically matched to d2ffha1
          complexed with ca, gcp
          1. region b:1-88 [129572] picpiclink
        8. 2c03 picpicxrefxref
          automatically matched to d2ffha1
          complexed with dio, edo, gdp
          1. region a:1-88 [129566] picpiclink
        9. 2c03 picpicxrefxref
          automatically matched to d2ffha1
          complexed with dio, edo, gdp
          1. region b:1-88 [129568] picpiclink
        10. 1okk picpicxrefxrefxref
          complexed with bzp, edo, gcp, mo3, so4
          1. region a:4-88 [93259] picpiclink
        11. 1rj9 picpicxrefxrefxref
          complexed with gcp, mg
          1. region b:14-88 [97555] picpiclink
        12. 1ffh picpicxref
          complexed with mo5
          1. region a:2-88 [16960] picpiclink
        13. 2j7p picpicxrefxrefxrefxrefxrefxref
          automatically matched to d2ffha1
          complexed with edo, gnp, iod, k, mg
          1. region a:3-88 [138119] picpiclink
        14. 2j7p picpicxrefxrefxrefxrefxrefxref
          automatically matched to d2ffha1
          complexed with edo, gnp, iod, k, mg
          1. region b:4-88 [138121] picpiclink
        15. 1jpn picpicxref
          complexed with acy, gnp, oc3, oc4
          1. region a:1-88 [67039] picpiclink
          2. region b:1-88 [67041] picpiclink
        16. 1ng1 picpicxref
          complexed with acy, cd, edo, gdp, mo4, mo6
          1. region a:1-88 [16961] picpiclink
        17. 1o87 picpicxref
          complexed with cl, fmt, gdp, mo4, mo5
          1. region a:1-88 [92640] picpiclink
          2. region b:1-88 [92642] picpiclink
        18. 2ng1 picpicxref
          complexed with dox, edo, gdp; mutant
          1. region a:2-88 [16962] picpiclink
        19. 3ng1 picpicxref
          complexed with cd, edo, so4
          1. region a:1-88 [16963] picpiclink
          2. region b:1-88 [16964] picpiclink
        20. 2cnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d2ffha1
          complexed with 5gp, alf, gdp, mg
          1. region a:4-88 [130649] picpiclink
        21. 2cnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d2ffha1
          complexed with 5gp, alf, gdp, mg
          1. region b:4-88 [130651] picpiclink
        22. 2cnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d2ffha1
          complexed with 5gp, alf, gdp, mg
          1. region c:4-88 [130653] picpiclink
        23. 1jpj picpicxref
          complexed with gnp
          1. region a:1-88 [67024] picpiclink
        24. 2ffh picpicxrefxref
          complexed with cd, so4; mutant
          1. region a:1-88 [16965] picpiclink
          2. region b:1-88 [16966] picpiclink
          3. region c:1-88 [16967] picpiclink
        25. 2iy3 picpicxref
          automatically matched to d2ffha1
          1. region a:1-88 [137790] picpiclink
      2. Archaeon Acidianus ambivalens [TaxId: 2283] [63538] (2)
        1. 1j8y picpicxref
          mutant
          1. region f:3-86 [62747] picpiclink
        2. 1j8m picpicxref
          1. region f:3-86 [62742] picpiclink
      3. Archaeon Sulfolobus solfataricus [TaxId: 2287] [101121] (2)
        1. 1qzx picpicxrefxref
          1. region a:1-87 [96711] picpiclink
          2. region b:1-87 [96714] picpiclink
        2. 1qzw picpicxrefxref
          complexed with ccc, gtp
          1. region a:1-87 [96699] picpiclink
          2. region c:1-87 [96702] picpiclink
          3. region e:1-87 [96705] picpiclink
          4. region g:1-87 [96708] picpiclink
    2. Signal recognition particle receptor, FtsY [47368]
      1. Escherichia coli [TaxId: 562] [47369] (2)
        1. 2qy9 picpicxref
          automatically matched to d1ftsa1
          1. region a:201-284 [151469] picpiclink
        2. 1fts picpicxref
          1. region a:201-284 [16968] picpiclink
      2. Thermus aquaticus [TaxId: 271] [101122] (8)
        1. 1okk picpicxrefxrefxref
          complexed with bzp, edo, gcp, mo3, so4
          1. region d:21-78 [93261] picpiclink
        2. 1rj9 picpicxrefxrefxref
          complexed with gcp, mg
          1. region a:27-95 [97553] picpiclink
        3. 2j7p picpicxrefxrefxrefxrefxrefxref
          automatically matched to d1okkd1
          complexed with edo, gnp, iod, k, mg
          1. region d:22-78 [138123] picpiclink
        4. 2j7p picpicxrefxrefxrefxrefxrefxref
          automatically matched to d1okkd1
          complexed with edo, gnp, iod, k, mg
          1. region e:27-78 [138125] picpiclink
        5. 2iyl picpicxref
          automatically matched to d1okkd1
          complexed with gdp, so4
          1. region d:21-78 [137801] picpiclink
        6. 2cnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1okkd1
          complexed with 5gp, alf, gdp, mg
          1. region d:21-78 [130655] picpiclink
        7. 2cnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1okkd1
          complexed with 5gp, alf, gdp, mg
          1. region e:23-78 [130657] picpiclink
        8. 2cnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1okkd1
          complexed with 5gp, alf, gdp, mg
          1. region f:26-78 [130659] picpiclink
      3. Thermotoga maritima [TaxId: 2336] [109766] (1)
        SQ Q9WZ40
        1. 1vma picpicxref
          Structural genomics target
          complexed with cit, mg
          1. region a:1-81 [108887] picpiclink
          2. region b:1-81 [108889] picpiclink
    3. Signal recognition particle 54 kDa protein, SRP54 [116874]
      1. Mouse (Mus musculus) [TaxId: 10090] [116875] (1)
        SQ P14576 4-85
        1. 1wgw picpic
          Structural genomics target
          1. chain a [114625] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk