Structural Classification of Proteins
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Superfamily: Cytochromes

Heme-containing proteins
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Four-helical up-and-down bundle [47161]
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. Superfamily: Cytochromes [47175]
    Heme-containing proteins
    link to SUPERFAMILY database - Superfamily

Families:

  1. Cytochrome b562 [47176] (1)
    1. Cytochrome b562 [47177]
      1. Escherichia coli [TaxId: 562] [47178] (6)
        1. 256b picpic
          complexed with hem, so4
          1. chain a [16539] picpiclink
          2. chain b [16540] picpiclink
        2. 1m6t picpic
          b562ril, a redesigned four helix bundle
          complexed with so4; mutant
          1. chain a [78705] picpiclink
        3. 1lm3 picpic
          complexed with hem, mg; mutant
          1. chain b [74027] picpiclink
          2. chain d [74028] picpiclink
        4. 1qq3 picpic
          complexed with heb; mutant
          1. chain a [16541] picpiclink
        5. 1qpu picpic
          complexed with hem
          1. chain a [16542] picpiclink
        6. 1apc picpic
          apo-form
          1. chain a [16543] picpiclink
  2. Cytochrome c'-like [47179] (9)
    1. Cytochrome c' [47180]
      1. Rhodospirillum molischianum [TaxId: 1083] [47181] (1)
        1. 2ccy picpic
          complexed with hem
          1. chain a [16544] picpiclink
          2. chain b [16545] picpiclink
      2. Chromatium vinosum [TaxId: 1049] [47182] (1)
        1. 1bbh picpic
          complexed with hem
          1. chain a [16546] picpiclink
          2. chain b [16547] picpiclink
      3. Alcaligenes denitrificans [TaxId: 32002] [47183] (1)
        1. 1cgn picpic
          complexed with hem
          1. chain a [16548] picpiclink
      4. Alcaligenes sp. [TaxId: 512] [47184] (5)
        1. 1e85 picpic
          complexed with hec, nmo
          1. chain a [16549] picpiclink
        2. 1e84 picpic
          complexed with hec
          1. chain a [16552] picpiclink
        3. 1cgo picpic
          complexed with hem
          1. chain a [16550] picpiclink
        4. 1e86 picpic
          complexed with cmo, hec
          1. chain a [16551] picpiclink
        5. 1e83 picpic
          complexed with hec
          1. chain a [16553] picpiclink
      5. Rhodocyclus gelatinosus [TaxId: 28068] [47185] (5)
        1. 2j8w picpic
          automatically matched to d1jafa_
          complexed with hem
          1. region a:1-128 [147931] picpiclink
        2. 2j8w picpic
          automatically matched to d1jafa_
          complexed with hem
          1. region b:1-128 [147932] picpiclink
        3. 2j9b picpic
          automatically matched to d1jafa_
          complexed with hem
          1. region a:1-127 [147935] picpiclink
        4. 2j9b picpic
          automatically matched to d1jafa_
          complexed with hem
          1. region b:1-128 [147936] picpiclink
        5. 1jaf picpic
          complexed with hem
          1. chain a [16554] picpiclink
          2. chain b [16555] picpiclink
      6. Rhodobacter capsulatus [TaxId: 1061] [47186] (4)
        1. 1cpq picpic
          complexed with hem
          1. chain a [16556] picpiclink
        2. 1rcp picpic
          complexed with hem
          1. chain a [16557] picpiclink
          2. chain b [16558] picpiclink
        3. 1cpr picpic
          complexed with hem, zn
          1. chain a [16559] picpiclink
        4. 1nbb picpic
          complexed with hem, nbn
          1. chain a [16560] picpiclink
          2. chain b [16561] picpiclink
      7. Rhodobacter sphaeroides [TaxId: 1063] [81734] (1)
        1. 1gqa picpic
          complexed with hec
          1. chain a [76275] picpiclink
          2. chain d [76276] picpiclink
      8. Rhodopseudomonas palustris [TaxId: 1076] [47187] (2)
        1. 1mqv picpic
          complexed with hem; mutant
          1. chain a [79415] picpiclink
          2. chain b [79416] picpiclink
        2. 1a7v picpic
          complexed with hem
          1. chain a [16562] picpiclink
          2. chain b [16563] picpiclink
    2. Cytochrome c-556 [101109]
      1. Rhodopseudomonas palustris [TaxId: 1076] [101110] (1)
        1. 1s05 picpic
          complexed with hem
          1. chain a [98254] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk