Structural Classification of Proteins
Family: Ribonucleotide reductase-like
Lineage:
Root:
scop
Class:
All alpha proteins
[46456]
Fold:
Ferritin-like
[47239]
core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
Superfamily:
Ferritin-like
[47240]
contains bimetal-ion centre in the middle of the bundle
uperfamily
Family:
Ribonucleotide reductase-like
[47253]
Protein Domains:
Methane monooxygenase hydrolase alpha subunit [88789]
Methylococcus capsulatus
[TaxId: 414]
[88790] (43)
1mty
complexed with fe
chain d
[16742]
chain e
[16743]
1xvb
automatically matched to d1fzia_
complexed with 3br, bbu, bbx, bhl, ca, fe
region a:18-526
[122344]
1xvb
automatically matched to d1fzia_
complexed with 3br, bbu, bbx, bhl, ca, fe
region b:18-526
[122345]
1fz1
complexed with ca, fe, fmt
chain a
[16744]
chain b
[16745]
1xu5
automatically matched to d1fzia_
complexed with fe, iph, oh
region a:18-526
[122326]
1xu5
automatically matched to d1fzia_
complexed with fe, iph, oh
region b:18-526
[122327]
1xvg
automatically matched to d1fzia_
complexed with brj, ca, fe
region a:18-526
[122374]
1xvg
automatically matched to d1fzia_
complexed with brj, ca, fe
region b:18-526
[122375]
1fz7
complexed with ca, eoh, fe, fmt
chain a
[16752]
chain b
[16753]
1fz3
complexed with ca, fe, fmt
chain a
[16748]
chain b
[16749]
1fz0
complexed with ca, fe2
chain a
[16756]
chain b
[16757]
1xvf
automatically matched to d1fzia_
complexed with 3cl, fe
region a:18-526
[122368]
1xvf
automatically matched to d1fzia_
complexed with 3cl, fe
region b:18-526
[122369]
1xvc
automatically matched to d1fzia_
complexed with 5br, bmm, br, fe, fmt
region a:18-526
[122350]
1xvc
automatically matched to d1fzia_
complexed with 5br, bmm, br, fe, fmt
region b:18-526
[122351]
1fyz
complexed with ca, fe2
chain a
[16760]
chain b
[16761]
1fz2
complexed with ca, fe2
chain a
[16764]
chain b
[16765]
1fz8
complexed with 2bm, ca, fe
chain a
[60122]
chain b
[60123]
1fz6
complexed with ca, fe, moh
chain a
[60116]
chain b
[60117]
1mmo
complexed with acy, fe
chain d
[16770]
chain e
[16771]
1xmg
automatically matched to d1fzia_
complexed with ca
region a:18-526
[122153]
1xmg
automatically matched to d1fzia_
complexed with ca
region b:18-526
[122154]
1xmg
automatically matched to 1XMF C:2-389
complexed with ca
region c:2-389
[122155]
1xmg
automatically matched to 1XMF C:2-389
complexed with ca
region d:2-389
[122156]
1xmh
automatically matched to d1fzia_
complexed with co
region a:18-526
[122159]
1xmh
automatically matched to d1fzia_
complexed with co
region b:18-526
[122160]
1xmh
automatically matched to 1XMF C:2-389
complexed with co
region c:2-389
[122161]
1xmh
automatically matched to 1XMF C:2-389
complexed with co
region d:2-389
[122162]
1xu3
automatically matched to d1fzia_
complexed with bml, fe
region a:18-526
[122320]
1xu3
automatically matched to d1fzia_
complexed with bml, fe
region b:18-526
[122321]
1xvd
automatically matched to d1fzia_
complexed with fe, fpn
region a:18-526
[122356]
1xvd
automatically matched to d1fzia_
complexed with fe, fpn
region b:18-526
[122357]
1fz9
complexed with ca, eti, fe
chain a
[60128]
chain b
[60129]
1xmf
complexed with ca, mn
region c:2-389
[122149]
1xmf
automatically matched to d1fzia_
complexed with ca, mn
region a:18-526
[122147]
1xmf
automatically matched to d1fzia_
complexed with ca, mn
region b:18-526
[122148]
1xve
automatically matched to d1fzia_
complexed with 3bb, ca, fe
region a:18-526
[122362]
1xve
automatically matched to d1fzia_
complexed with 3bb, ca, fe
region b:18-526
[122363]
1xmf
automatically matched to 1XMF C:2-389
complexed with ca, mn
region d:2-389
[122150]
1fz5
complexed with ca, fe2
chain a
[16776]
chain b
[16777]
1fzh
complexed with ca, fe, xe
chain a
[60134]
chain b
[60135]
1fz4
complexed with ca, fe, fmt
chain a
[16772]
chain b
[16773]
1fzi
complexed with fe, xe
chain a
[60140]
chain b
[60141]
Methylosinus trichosporium
[TaxId: 426]
[88791] (2)
1mhy
complexed with fe
chain d
[16780]
1mhz
complexed with fe
chain d
[16782]
Methane monooxygenase hydrolase beta subunit [88792]
Methylococcus capsulatus
[TaxId: 414]
[88793] (31)
1mty
complexed with fe
chain b
[16740]
chain c
[16741]
1xvb
automatically matched to d1fyzc_
complexed with 3br, bbu, bbx, bhl, ca, fe
region c:2-389
[122346]
1xvb
automatically matched to d1fyzc_
complexed with 3br, bbu, bbx, bhl, ca, fe
region d:2-389
[122347]
1fz1
complexed with ca, fe, fmt
chain c
[16746]
chain d
[16747]
1xu5
automatically matched to d1fyzc_
complexed with fe, iph, oh
region c:2-389
[122328]
1xu5
automatically matched to d1fyzc_
complexed with fe, iph, oh
region d:2-389
[122329]
1xvg
automatically matched to d1fyzc_
complexed with brj, ca, fe
region c:2-389
[122376]
1xvg
automatically matched to d1fyzc_
complexed with brj, ca, fe
region d:2-389
[122377]
1fz7
complexed with ca, eoh, fe, fmt
chain c
[16754]
chain d
[16755]
1fz3
complexed with ca, fe, fmt
chain c
[16750]
chain d
[16751]
1fz0
complexed with ca, fe2
chain c
[16758]
chain d
[16759]
1xvf
automatically matched to d1fyzc_
complexed with 3cl, fe
region c:2-389
[122370]
1xvf
automatically matched to d1fyzc_
complexed with 3cl, fe
region d:2-389
[122371]
1xvc
automatically matched to d1fyzc_
complexed with 5br, bmm, br, fe, fmt
region c:2-389
[122352]
1xvc
automatically matched to d1fyzc_
complexed with 5br, bmm, br, fe, fmt
region d:2-388
[122353]
1fyz
complexed with ca, fe2
chain c
[16762]
chain d
[16763]
1fz2
complexed with ca, fe2
chain c
[16766]
chain d
[16767]
1fz8
complexed with 2bm, ca, fe
chain c
[60124]
chain d
[60125]
1fz6
complexed with ca, fe, moh
chain c
[60118]
chain d
[60119]
1mmo
complexed with acy, fe
chain b
[16768]
chain c
[16769]
1xu3
automatically matched to d1fyzc_
complexed with bml, fe
region c:2-389
[122322]
1xu3
automatically matched to d1fyzc_
complexed with bml, fe
region d:2-389
[122323]
1xvd
automatically matched to d1fyzc_
complexed with fe, fpn
region c:2-389
[122358]
1xvd
automatically matched to d1fyzc_
complexed with fe, fpn
region d:2-389
[122359]
1fz9
complexed with ca, eti, fe
chain c
[60130]
chain d
[60131]
1xve
automatically matched to d1fyzc_
complexed with 3bb, ca, fe
region c:2-389
[122364]
1xve
automatically matched to d1fyzc_
complexed with 3bb, ca, fe
region d:2-389
[122365]
1fz5
complexed with ca, fe2
chain c
[16778]
chain d
[16779]
1fzh
complexed with ca, fe, xe
chain c
[60136]
chain d
[60137]
1fz4
complexed with ca, fe, fmt
chain c
[16774]
chain d
[16775]
1fzi
complexed with fe, xe
chain c
[60142]
chain d
[60143]
Methylosinus trichosporium
[TaxId: 426]
[88794] (2)
1mhy
complexed with fe
chain b
[16781]
1mhz
complexed with fe
chain b
[16783]
Ribonucleotide reductase R2 [47257]
Escherichia coli
[TaxId: 562]
[47258] (24)
1mxr
complexed with cry, fe, hg
chain a
[85197]
chain b
[85198]
1jqc
complexed with hg, mn
chain a
[63229]
chain b
[63230]
1pm2
complexed with hg, mn; mutant
chain a
[94887]
chain b
[94888]
1jpr
complexed with hg, mn
chain a
[63224]
chain b
[63225]
1piy
complexed with fe, hg
chain a
[94710]
chain b
[94711]
1yfd
complexed with f2o, hg; mutant
region a:1-340
[123059]
1yfd
automatically matched to 1YFD A:1-340
complexed with f2o, hg; mutant
region b:1-340
[123060]
1pj1
complexed with fe, hg; mutant
chain a
[94716]
chain b
[94717]
1pj0
complexed with fe, hg; mutant
chain a
[94714]
chain b
[94715]
1piz
complexed with fe, hg; mutant
chain a
[94712]
chain b
[94713]
1xik
complexed with fe2, hg
chain a
[16784]
chain b
[16785]
1r65
complexed with fe2, hg
chain a
[97144]
chain b
[97145]
1rsr
complexed with azi, fe2, hg; mutant
chain a
[97815]
chain b
[97816]
1pim
complexed with fe, hg; mutant
chain a
[88117]
chain b
[88118]
1piu
complexed with fe, hg, o; mutant
chain a
[88119]
chain b
[88120]
1rib
complexed with feo
chain a
[16788]
chain b
[16789]
1biq
complexed with ehp, fe, fe2, hg, oh; mutant
chain a
[16786]
chain b
[16787]
1pfr
complexed with fe, hg; mutant
chain a
[16790]
chain b
[16791]
1rsv
complexed with azi, fe, hg; mutant
chain a
[97817]
chain b
[97818]
2av8
complexed with fe2, feo; mutant
chain a
[16792]
chain b
[16793]
1av8
complexed with feo
chain a
[16796]
chain b
[16797]
1rnr
complexed with fe, hg, oh; mutant
chain a
[16798]
chain b
[16799]
1mrr
complexed with hg, mn
chain a
[16794]
chain b
[16795]
2alx
automatically matched to d1jprb_
complexed with hg, mn
region a:1-339
[126986]
Salmonella typhimurium
[TaxId: 90371]
[47259] (4)
1r2f
complexed with fe
chain a
[16800]
chain b
[16801]
2r2f
complexed with fe, o
chain a
[16802]
chain b
[16803]
2bq1
automatically matched to d2r2fa_
complexed with dgt, fe, mg
region i:6-288
[128957]
2bq1
automatically matched to d2r2fa_
complexed with dgt, fe, mg
region j:6-286
[128958]
Corynebacterium ammoniagenes
[TaxId: 1697]
[69006] (6)
3dhz
automatically matched to d1uzrb_
complexed with fe2
region a:14-297
[157741]
3dhz
automatically matched to d1uzrb_
complexed with fe2
region b:14-297
[157742]
1kgn
complexed with fe, of2, of3
chain a
[68584]
chain b
[68585]
chain c
[68586]
chain d
[68587]
1kgp
complexed with mn
chain a
[68592]
chain b
[68593]
chain c
[68594]
chain d
[68595]
1oqu
complexed with act, fe, o2
chain a
[93435]
chain b
[93436]
chain c
[93437]
chain d
[93438]
1kgo
complexed with fe2
chain a
[68588]
chain b
[68589]
chain c
[68590]
chain d
[68591]
Mouse (Mus musculus)
[TaxId: 10090]
[47260] (5)
SQ
P11157
1w69
complexed with acy, fe2
chain a
[109217]
1w68
complexed with feo
chain a
[109216]
1h0o
complexed with co
chain a
[70845]
1xsm
complexed with fe
chain a
[16804]
1h0n
complexed with co
chain a
[70844]
Baker's yeast (Saccharomyces cerevisiae), Y2
[TaxId: 4932]
[88795] (2)
SQ
P09938
1jk0
heterodimer with Y4 isoform
complexed with zn
chain a
[63142]
1smq
chain a
[105766]
chain b
[105767]
chain c
[105768]
chain d
[105769]
Baker's yeast (Saccharomyces cerevisiae), Y4
[TaxId: 4932]
[88796] (2)
SQ
P49723
1jk0
heterodimer with Y2 isoform
complexed with zn
chain b
[63143]
1sms
complexed with hg
chain a
[105770]
chain b
[105771]
Chlamydia trachomatis
[TaxId: 813]
[109786] (1)
SQ
O84835
1syy
complexed with fe, pb
chain a
[106126]
Mycobacterium tuberculosis
[TaxId: 1773]
[109787] (1)
SQ
Q50549
10-291
1uzr
complexed with cit, fe, gol
chain a
[108178]
chain b
[108179]
chain c
[108180]
Human (Homo sapiens), RRM2
[TaxId: 9606]
[158401] (1)
SQ
P31350
66-350
2uw2
complexed with fe
region a:66-350
[152205]
delta 9-stearoyl-acyl carrier protein desaturase [47261]
Castor bean (Ricinus communis)
[TaxId: 3988]
[47262] (5)
1afr
complexed with fe2
chain a
[16805]
chain b
[16806]
chain c
[16807]
chain d
[16808]
chain e
[16809]
chain f
[16810]
1oq4
complexed with azi, fe
chain a
[87245]
chain b
[87246]
chain c
[87247]
chain d
[87248]
chain e
[87249]
chain f
[87250]
1oq9
complexed with act, fe
chain a
[87257]
1oqb
complexed with fe2
chain a
[87258]
chain b
[87259]
chain c
[87260]
chain d
[87261]
chain e
[87262]
chain f
[87263]
1oq7
complexed with sr
chain a
[87251]
chain b
[87252]
chain c
[87253]
chain d
[87254]
chain e
[87255]
chain f
[87256]
Phenylacetic acid degradation protein PaaC [101136]
Escherichia coli
[TaxId: 562]
[101137] (1)
1otk
structural genomics
chain a
[93521]
chain b
[93522]
Toluene, o-xylene monooxygenase oxygenase subunit TouA [109788]
contains the TouB(TmoB)-binding YHS (sub)domain (
Pfam 04945
) in the C-terminal part (401-450)
Pseudomonas stutzeri
[TaxId: 316]
[109789] (5)
SQ
O87798
2inc
automatically matched to d1t0qa_
complexed with fe, p6g
region a:2-492
[137524]
1t0q
complexed with fe, mcr, oh, so4
chain a
[106220]
2ind
automatically matched to d1t0qa_
complexed with mn, p6g
region a:2-492
[137527]
1t0s
complexed with bml, fe, mcr, oh
chain a
[106226]
1t0r
complexed with azi, fe, oh
chain a
[106223]
Toluene, o-xylene monooxygenase oxygenase subunit TouE [109790]
Pseudomonas stutzeri
[TaxId: 316]
[109791] (6)
SQ
O87802
2inc
automatically matched to d1t0rb_
complexed with fe, p6g
region b:8-329
[137525]
1t0q
complexed with fe, mcr, oh, so4
chain b
[106221]
2ind
automatically matched to d1t0rb_
complexed with mn, p6g
region b:8-330
[137528]
1t0s
complexed with bml, fe, mcr, oh
chain b
[106227]
1t0r
complexed with azi, fe, oh
chain b
[106224]
2rdb
automatically matched to d1t0rb_
complexed with fe, gol, mpo, p6g; mutant
region b:8-329
[151922]
Possible acyl-[acyl-carrier protein] desaturase [140442]
Mycobacterium tuberculosis
[TaxId: 1773]
[140443] (1)
SQ
O53442
8-274
1za0
complexed with edo, mn
region a:8-274
[124774]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk