Structural Classification of Proteins
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Fold: Acyl carrier protein-like

4 helices, bundle; helix 3 is shorter than others; up-and-down

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Acyl carrier protein-like [47335]
    4 helices, bundle; helix 3 is shorter than others; up-and-down

Superfamilies:

  1. ACP-like [47336] (3)
    link to SUPERFAMILY database - Superfamily
    1. Acyl-carrier protein (ACP) [47337] (9)
      1. Acyl carrier protein [47338]
        1. Escherichia coli [TaxId: 562] [47339] (23) picpic
          SQ P02901
        2. Bacillus subtilis [TaxId: 1423] [63534] (2) picpic
        3. Mycobacterium tuberculosis [TaxId: 1773] [74711] (1) picpic
        4. Thermotoga maritima [TaxId: 2336] [109793] (1) picpic
          SQ Q9WY19
      2. Actinorhodin polyketide synthase acyl carrier protein, ACT ACP [47340]
        1. Streptomyces coelicolor, A3(2) [TaxId: 1902] [47341] (2) picpic
      3. Frenolicin polyketide synthase acyl carrier protein, Fren ACP [89038]
        1. Streptomyces roseofulvus [TaxId: 33902] [89039] (1) picpic
      4. Oxytetracycline polyketide synthase acyl carrier [101142]
        1. Streptomyces rimosus [TaxId: 1927] [101143] (1) picpic
      5. Type I fatty acid synthase ACP domain [89040]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [89041] (1) picpic
      6. Hypothetical protein Atu2571 [158427]
        1. Agrobacterium tumefaciens [TaxId: 358] [158428] (1) picpic
          SQ Q8UCC7 1-83
    2. Peptidyl carrier domain [47342] (1)
      1. Peptidyl carrier protein (PCP), thioester domain [47343]
        1. Bacillus brevis [TaxId: 1393] [47344] (4) picpic
    3. apo-D-alanyl carrier protein [63535] (1)
      1. apo-D-alanyl carrier protein [63536]
        1. Lactobacillus casei [TaxId: 1582] [63537] (2) picpic
  2. Colicin E immunity proteins [47345] (1)
    link to SUPERFAMILY database - Superfamily
    1. Colicin E immunity proteins [47346] (3)
      1. ImmE7 protein (Im7) [47347]
        1. Escherichia coli [TaxId: 562] [47348] (13) picpic
      2. ImmE8 (Im8) [47349]
        1. Escherichia coli [TaxId: 562] [47350] (2) picpic
      3. ImmE9 protein (Im9) [47351]
        1. Escherichia coli [TaxId: 562] [47352] (14) picpic
  3. Retrovirus capsid dimerization domain-like [47353] (2)
    link to SUPERFAMILY database - Superfamily
    1. Retrovirus capsid protein C-terminal domain [47354] (4)
      1. EIAV capsid protein p26 [47355]
        1. Equine infectious anemia virus [TaxId: 11665] [47356] (2) picpic
      2. HTLV-I capsid protein [47357]
        1. Human T-cell leukemia virus type 1 [TaxId: 11908] [47358] (1) picpic
      3. HIV capsid protein, dimerisation domain [47359]
        1. Human immunodeficiency virus type 1 [TaxId: 11676] [47360] (7) picpic
      4. RSV capsid protein [47361]
        1. Rous sarcoma virus [TaxId: 11886] [47362] (2) picpic
    2. SCAN domain [140466] (2)
      Pfam 02023; forms segment-swapped dimers compared to the retroviral capsid domain
      1. Zinc finger protein 42 [140467]
        1. Human (Homo sapiens) [TaxId: 9606] [140468] (2) picpic
          SQ P28698 37-128
      2. Zinc finger protein 174 [140469]
        1. Human (Homo sapiens) [TaxId: 9606] [140470] (2) picpic
          SQ Q15697 37-132
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk