Structural Classification of Proteins
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Fold: Bromodomain-like

4 helices; bundle; minor mirror variant of up-and-down topology

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bromodomain-like [47363]
    4 helices; bundle; minor mirror variant of up-and-down topology

Superfamilies:

  1. Bromodomain [47370] (1)
    link to SUPERFAMILY database - Superfamily
    1. Bromodomain [47371] (5)
      1. GCN5 [47372]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [47373] (1)
          1. 1e6i picpic
            complexed with acetylated H4 peptide
            1. chain a [16969] picpiclink
        2. Human (Homo sapiens) [TaxId: 9606] [47374] (3)
          1. 3d7c picpic
            automatically matched to d1f68a_
            1. region a:731-832 [157420] picpiclink
          2. 3d7c picpic
            automatically matched to d1f68a_
            1. region b:731-832 [157421] picpiclink
          3. 1f68 picpic
            mutant
            1. chain a [16970] picpiclink
      2. P300/CAF histone acetyltransferase bromodomain [47375]
        1. Human (Homo sapiens) [TaxId: 9606] [47376] (7)
          1. 1wum picpic
            automatically matched to d1jm4b_
            complexed with np2
            1. region a:715-832 [121297] picpiclink
          2. 1zs5 picpic
            automatically matched to d1jm4b_
            complexed with mib
            1. region a:715-832 [125589] picpiclink
          3. 2rnw picpic
            automatically matched to d1jm4b_
            1. region a:715-832 [152173] picpiclink
          4. 2rnx picpic
            automatically matched to d1jm4b_
            1. region a:715-832 [152174] picpiclink
          5. 1wug picpic
            automatically matched to d1jm4b_
            complexed with np1
            1. region a:715-832 [121286] picpiclink
          6. 1jm4 picpic
            complexed with HIV-1 tat peptide, chain A
            complexed with aly
            1. chain b [71746] picpiclink
          7. 1n72 picpic
            1. chain a [80213] picpiclink
      3. TAFII250 double bromodomain module [47377]
        1. Human (Homo sapiens) [TaxId: 9606] [47378] (1)
          1. 1eqf picpic
            complexed with so4
            1. region a:1359-1497 [16972] picpiclink
            2. region a:1498-1625 [16973] picpiclink
      4. CREB-binding protein, CBP [74712]
        1. Human (Homo sapiens) [TaxId: 9606] [74713] (5)
          1. 3dwy picpic
            automatically matched to d1jspb_
            complexed with edo
            1. region a:1084-1197 [157925] picpiclink
          2. 3dwy picpic
            automatically matched to d1jspb_
            complexed with edo
            1. region b:1085-1196 [157926] picpiclink
          3. 2d82 picpic
            automatically matched to d1jspb_
            complexed with ttr
            1. region a:1077-1197 [131327] picpiclink
          4. 2rny picpic
            automatically matched to d1jspb_
            1. region a:1077-1197 [152175] picpiclink
          5. 1jsp picpic
            complexed with p53 peptide, chain A
            complexed with aly
            1. chain b [71843] picpiclink
  2. alpha-ketoacid dehydrogenase kinase, N-terminal domain [69012] (1)
    link to SUPERFAMILY database - Superfamily
    1. alpha-ketoacid dehydrogenase kinase, N-terminal domain [69013] (3)
      1. Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) [69014]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [69015] (3)
          1. 1gkz picpicxref
            complexed with adp, cl, k, mg, xe
            1. region a:38-185 [65268] picpiclink
          2. 1gkx picpicxref
            complexed with cl
            1. region a:38-185 [65266] picpiclink
          3. 1gjv picpicxref
            complexed with cl, k, mg, sap
            1. region a:38-185 [65220] picpiclink
      2. Pyruvate dehydrogenase kinase [69016]
        1. Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116] [69017] (1)
          1. 1jm6 picpicxref
            complexed with adp, mg
            1. region a:1003-1169 [66876] picpiclink
            2. region b:1002-1169 [66878] picpiclink
        2. Human (Homo sapiens) [TaxId: 9606] [158429] (8)
          SQ Q15120 13-176
          1. 1y8o picpicxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with adp, k, lpa, mg
            1. region a:13-176 [144603] picpiclink
          2. 2pnr picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with red
            1. region a:13-176 [149696] picpiclink
          3. 2pnr picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with red
            1. region b:14-176 [149698] picpiclink
          4. 2pnr picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with red
            1. region e:13-176 [149701] picpiclink
          5. 2pnr picpicxrefxrefxrefxrefxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with red
            1. region f:14-176 [149703] picpiclink
          6. 2q8i picpicxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with gol, k, rdc, red
            1. region a:13-176 [150126] picpiclink
          7. 1y8p picpicxrefxref
            automatically matched to 1Y8N A:13-176
            complexed with atp, k, lpa, mg
            1. region a:13-176 [144605] picpiclink
          8. 1y8n picpicxrefxref
            complexed with k, lpa
            1. region a:13-176 [144601] picpiclink
  3. Acyl-CoA dehydrogenase C-terminal domain-like [47203] (2)
    multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
    link to SUPERFAMILY database - Superfamily
    1. Medium chain acyl-CoA dehydrogenase-like, C-terminal domain [47204] (12)
      1. Butyryl-CoA dehydrogenase, C-domain [47205]
        1. Megasphaera elsdenii [TaxId: 907] [47206] (1)
          1. 1buc picpicxref
            complexed with caa, fad
            1. region a:233-383 [16590] picpiclink
            2. region b:233-383 [16591] picpiclink
        2. Rat (Rattus norvegicus) [TaxId: 10116] [69018] (1)
          1. 1jqi picpicxref
            complexed with caa, fad
            1. region a:235-387 [67087] picpiclink
            2. region b:635-787 [67089] picpiclink
      2. Medium chain acyl-CoA dehydrogenase, C-domain [47207]
        1. Pig (Sus scrofa) [TaxId: 9823] [47208] (3)
          1. 3mde picpicxref
            complexed with co8, fad
            1. region a:242-395 [16594] picpiclink
            2. region b:242-395 [16595] picpiclink
          2. 3mdd picpicxref
            complexed with fad
            1. region a:242-395 [16592] picpiclink
            2. region b:242-395 [16593] picpiclink
          3. 1udy picpicxref
            complexed with cs8, fad
            1. region a:242-395 [99231] picpiclink
            2. region b:242-393 [99233] picpiclink
            3. region c:242-395 [99235] picpiclink
            4. region d:242-395 [99237] picpiclink
        2. Human (Homo sapiens) [TaxId: 9606] [47209] (8)
          SQ P11310 34-421
          1. 1egd picpicxref
            complexed with fad; mutant
            1. region a:242-396 [16596] picpiclink
            2. region b:242-396 [16597] picpiclink
            3. region c:242-396 [16598] picpiclink
            4. region d:242-396 [16599] picpiclink
          2. 1egc picpicxref
            complexed with co8, fad; mutant
            1. region a:242-396 [16600] picpiclink
            2. region b:242-396 [16601] picpiclink
            3. region c:242-396 [16602] picpiclink
            4. region d:242-396 [16603] picpiclink
          3. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1egca1
            complexed with amp, fad; mutant
            1. region a:242-395 [126005] picpiclink
          4. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1egca1
            complexed with amp, fad; mutant
            1. region b:242-395 [126007] picpiclink
          5. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1egca1
            complexed with amp, fad; mutant
            1. region c:242-395 [126009] picpiclink
          6. 2a1t picpicxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1egca1
            complexed with amp, fad; mutant
            1. region d:242-395 [126011] picpiclink
          7. 1ege picpicxref
            complexed with fad; mutant
            1. region a:242-396 [16604] picpiclink
            2. region b:242-396 [16605] picpiclink
            3. region c:242-396 [16606] picpiclink
            4. region d:242-396 [16607] picpiclink
          8. 1t9g picpicxrefxrefxref
            complexed with amp, fad
            1. region a:242-395 [106711] picpiclink
            2. region b:242-395 [106713] picpiclink
            3. region c:242-395 [106715] picpiclink
            4. region d:242-395 [106717] picpiclink
        3. Thermus thermophilus [TaxId: 274] [116882] (1)
          SQ Q5SJ70 32-409
          1. 1ukw picpicxref
            complexed with co, fad
            1. region a:259-410 [113263] picpiclink
            2. region b:259-410 [113265] picpiclink
      3. Isovaleryl-CoA dehydrogenase, C-domain [47210]
        1. Human (Homo sapiens) [TaxId: 9606] [47211] (1)
          1. 1ivh picpicxref
            complexed with cos, fad
            1. region a:242-392 [16608] picpiclink
            2. region b:242-392 [16609] picpiclink
            3. region c:242-392 [16610] picpiclink
            4. region d:242-392 [16611] picpiclink
      4. Isobutyryl-CoA dehydrogenase [101144]
        1. Human (Homo sapiens) [TaxId: 9606] [101145] (1)
          1. 1rx0 picpicxref
            complexed with 2mc, acy, egl, fad
            1. region a:241-393 [98007] picpiclink
            2. region b:241-393 [98009] picpiclink
            3. region c:241-393 [98011] picpiclink
            4. region d:241-393 [98013] picpiclink
      5. Protein FkbI [101146]
        involved in biosynthesis of methoxymalonyl extender unit of fk520 polyketide immunosuppressant
        1. Streptomyces hygroscopicus [TaxId: 1912] [101147] (1)
          1. 1r2j picpicxref
            complexed with fad
            1. region a:213-365 [96869] picpiclink
      6. Glutaryl-CoA dehydrogenase GCDH [109794]
        1. Human (Homo sapiens) [TaxId: 9606] [109795] (4)
          SQ Q92947
          1. 1siq picpicxref
            complexed with fad
            1. region a:239-392 [105585] picpiclink
          2. 2r0n picpicxref
            automatically matched to d1siqa1
            complexed with fad, tgc; mutant
            1. region a:239-392 [151506] picpiclink
          3. 1sir picpicxref
            complexed with fad, nbc
            1. region a:239-392 [105587] picpiclink
          4. 2r0m picpicxref
            automatically matched to d1siqa1
            complexed with 4ni, fad; mutant
            1. region a:239-392 [151504] picpiclink
      7. 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain [116883]
        1. Clostridium aminobutyricum [TaxId: 33953] [116884] (1)
          SQ P55792
          1. 1u8v picpicxref
            complexed with fad, fs4
            1. region a:276-490 [113196] picpiclink
            2. region b:276-490 [113198] picpiclink
            3. region c:276-490 [113200] picpiclink
            4. region d:276-490 [113202] picpiclink
      8. Nitroalkane oxidase [140471]
        1. Fusarium oxysporum [TaxId: 5507] [140472] (18)
          SQ Q8X1D8 261-430
          1. 2c12 picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, gol, pe4, spm
            1. region a:261-430 [129616] picpiclink
          2. 2c12 picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, gol, pe4, spm
            1. region b:261-430 [129618] picpiclink
          3. 2c12 picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, gol, pe4, spm
            1. region c:261-430 [129620] picpiclink
          4. 2c12 picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, gol, pe4, spm
            1. region d:261-430 [129622] picpiclink
          5. 2c12 picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, gol, pe4, spm
            1. region e:261-430 [129624] picpiclink
          6. 2c12 picpicxrefxrefxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, gol, pe4, spm
            1. region f:261-430 [129626] picpiclink
          7. 2c0u picpicxrefxrefxrefxref
            complexed with fad, nbt
            1. region a:261-430 [129607] picpiclink
          8. 2c0u picpicxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, nbt
            1. region b:261-430 [129609] picpiclink
          9. 2c0u picpicxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, nbt
            1. region c:261-430 [129611] picpiclink
          10. 2c0u picpicxrefxrefxrefxref
            automatically matched to 2C0U A:261-430
            complexed with fad, nbt
            1. region d:261-430 [129613] picpiclink
          11. 2reh picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region a:261-430 [151973] picpiclink
          12. 2reh picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region b:261-430 [151975] picpiclink
          13. 2reh picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region c:261-430 [151977] picpiclink
          14. 2reh picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region d:261-430 [151979] picpiclink
          15. 2zaf picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region a:261-430 [154277] picpiclink
          16. 2zaf picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region b:261-430 [154279] picpiclink
          17. 2zaf picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region c:261-430 [154281] picpiclink
          18. 2zaf picpicxrefxrefxrefxref
            automatically matched to d2c0ua1
            complexed with fad; mutant
            1. region d:261-430 [154283] picpiclink
      9. Acyl-CoA dehydrogenase [140473]
        1. Thermus thermophilus [TaxId: 274] [140474] (8)
          SQ Q5SGZ2 235-387
          1. 2d29 picpicxrefxref
            automatically matched to 1WS9 A:235-387
            complexed with fad
            1. region a:235-387 [131157] picpiclink
          2. 2d29 picpicxrefxref
            automatically matched to 1WS9 A:235-387
            complexed with fad
            1. region b:235-387 [131159] picpiclink
          3. 2cx9 picpicxrefxrefxrefxref
            automatically matched to 1WS9 A:235-387
            complexed with cl
            1. region a:235-387 [130985] picpiclink
          4. 2cx9 picpicxrefxrefxrefxref
            automatically matched to 1WS9 A:235-387
            complexed with cl
            1. region b:235-387 [130987] picpiclink
          5. 2cx9 picpicxrefxrefxrefxref
            automatically matched to 1WS9 A:235-387
            complexed with cl
            1. region c:235-387 [130989] picpiclink
          6. 2cx9 picpicxrefxrefxrefxref
            automatically matched to 1WS9 A:235-387
            complexed with cl
            1. region d:235-387 [130991] picpiclink
          7. 1ws9 picpicxrefxref
            1. region a:235-387 [121223] picpiclink
          8. 1ws9 picpicxrefxref
            automatically matched to 1WS9 A:235-387
            1. region b:235-387 [121225] picpiclink
    2. acyl-CoA oxidase C-terminal domains [74714] (2)
      duplication: tandem repeat of this fold
      1. Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 [74715]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [74716] (3)
          1. 2ddh picpicxref
            automatically matched to d1is2a1
            complexed with fad, hxd
            1. region a:278-460 [131394] picpiclink
          2. 2ddh picpicxref
            automatically matched to d1is2a2
            complexed with fad, hxd
            1. region a:475-655 [131395] picpiclink
          3. 1is2 picpicxref
            complexed with fad
            1. region a:272-460 [71382] picpiclink
            2. region a:475-655 [71383] picpiclink
            3. region b:278-458 [71385] picpiclink
            4. region b:475-655 [71386] picpiclink
      2. Acyl-coenzyme A oxidase 1, domains 3 and 4 [116885]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [116886] (1)
          SQ O65202
          1. 1w07 picpicxref
            complexed with ca, cl, fad, pt; mutant
            1. region a:273-461 [114046] picpiclink
            2. region a:462-659 [114047] picpiclink
            3. region b:273-461 [114049] picpiclink
            4. region b:462-659 [114050] picpiclink
  4. Plant invertase/pectin methylesterase inhibitor [101148] (1)
    contains a short alpha-hairpin at the N-terminal extension
    link to SUPERFAMILY database - Superfamily
    1. Plant invertase/pectin methylesterase inhibitor [101149] (2)
      Pfam 04043
      1. Invertase inhibitor [101150]
        1. Common tobacco (Nicotiana tabacum) [TaxId: 4097] [101151] (9)
          1. 2cj4 picpic
            automatically matched to d1rj1a_
            complexed with act, so4
            1. region a:4-150 [130518] picpiclink
          2. 2cj4 picpic
            automatically matched to d1rj1a_
            complexed with act, so4
            1. region b:5-150 [130519] picpiclink
          3. 2cj7 picpic
            automatically matched to d1rj1a_
            complexed with iod
            1. region a:4-150 [130522] picpiclink
          4. 2cj5 picpic
            automatically matched to d1rj1a_
            complexed with act, so4
            1. region a:4-150 [130520] picpiclink
          5. 1rj1 picpic
            1. chain a [97526] picpiclink
          6. 1rj4 picpic
            complexed with btb, cd
            1. chain a [97527] picpiclink
            2. chain b [97528] picpiclink
            3. chain c [97529] picpiclink
            4. chain d [97530] picpiclink
          7. 2cj6 picpic
            automatically matched to d1rj1a_
            complexed with iod
            1. region a:5-150 [130521] picpiclink
          8. 2cj8 picpic
            automatically matched to d1rj1a_
            complexed with iod
            1. region a:4-150 [130523] picpiclink
          9. 2cj8 picpic
            automatically matched to d1rj1a_
            complexed with iod
            1. region b:5-149 [130524] picpiclink
      2. Pectin methylesterase inhibitor 1, PMEI1 [116887]
        forms dimers and trimers by swapping the extra N-terminal hairpins
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [116888] (3)
          SQ Q9LNF2 28-176
          1. 1x91 picpic
            mutant
            1. chain a [114975] picpiclink
          2. 1x90 picpic
            mutant
            1. chain a [114973] picpiclink
            2. chain b [114974] picpiclink
          3. 1x8z picpic
            1. chain a [114970] picpiclink
            2. chain b [114971] picpiclink
            3. chain c [114972] picpiclink
  5. Mob1/phocein [101152] (1)
    common fold is elaborated with additional short helices; contains a zinc-binding site
    link to SUPERFAMILY database - Superfamily
    1. Mob1/phocein [101153] (2)
      1. Mob1a [101154]
        1. Human (Homo sapiens) [TaxId: 9606] [101155] (1)
          1. 1pi1 picpic
            complexed with zn
            1. chain a [94699] picpiclink
        2. African clawed frog (Xenopus laevis) [TaxId: 8355] [109796] (1)
          SQ Q7T1M9 33-215
          1. 1r3b picpic
            1. chain a [104786] picpiclink
  6. Bacteriocin immunity protein-like [109797] (2)
    link to SUPERFAMILY database - Superfamily
    1. Carnobacteriocin B2 immunity protein [109798] (1)
      1. Carnobacteriocin B2 immunity protein [109799]
        1. Carnobacterium piscicola [TaxId: 2751] [109800] (1)
          SQ P38582
          1. 1tdp picpic
            1. chain a [106781] picpiclink
    2. EntA-Im [140475] (1)
      1. Enterocine A immunity protein, EntA-Im [140476]
        1. Enterococcus faecium [TaxId: 1352] [140477] (3)
          SQ Q47785 3-82
          1. 2bl8 picpic
            complexed with flc
            1. region a:4-103 [146154] picpiclink
          2. 2bl8 picpic
            automatically matched to 2BL8 A:4-103
            complexed with flc
            1. region c:4-103 [146155] picpiclink
          3. 2bl7 picpic
            mutant
            1. region a:3-82 [128729] picpiclink
  7. LemA-like [140478] (1)
    helices 2 and 3 are shorther than helices 1 and 4
    link to SUPERFAMILY database - Superfamily
    1. LemA-like [140479] (1)
      Pfam 04011
      1. Hypothetical protein TM0961 [140480]
        1. Thermotoga maritima [TaxId: 2336] [140481] (1)
          SQ Q9X056 35-183
          1. 2etd picpic
            complexed with cl, mly
            1. region a:35-183 [132353] picpiclink
  8. MAST3 pre-PK domain-like [140482] (1)
    this domain precedes the Protein Kinase domain in Microtubule-associated serine/threonine-protein kinase 3 (MAST3)
    link to SUPERFAMILY database - Superfamily
    1. MAST3 pre-PK domain-like [140483] (1)
      1. Microtubule-associated serine/threonine-protein kinase 3, MAST3 (KIAA0561) [140484]
        1. Human (Homo sapiens) [TaxId: 9606] [140485] (1)
          SQ O60307 181-281
          1. 1v9v picpic
            1. region a:8-108 [119898] picpiclink
  9. PA2201 N-terminal domain-like [140486] (1)
    link to SUPERFAMILY database - Superfamily
    1. PA2201 N-terminal domain-like [140487] (1)
      trimerisation domain
      1. Hypothetical protein PA2201 [140488]
        1. Pseudomonas aeruginosa [TaxId: 287] [140489] (3)
          SQ Q9I1R6 6-129
          1. 2fef picpicxrefxrefxref
            complexed with edo
            1. region a:6-129 [133343] picpiclink
          2. 2fef picpicxrefxrefxref
            automatically matched to 2FEF A:6-129
            complexed with edo
            1. region b:6-129 [133345] picpiclink
          3. 2fef picpicxrefxrefxref
            automatically matched to 2FEF A:6-129
            complexed with edo
            1. region c:6-129 [133347] picpiclink
  10. Nqo1C-terminal domain-like [140490] (1)
    contains extra C-terminal helix that caps the bundle at one end and Fe4-S4 cluster at the other end
    link to SUPERFAMILY database - Superfamily
    1. Nqo1C-terminal domain-like [140491] (1)
      PfamB 000336; sequence similarity to the Fe4-S4 ferredoxins in the cluser-binding site
      1. NADH-quinone oxidoreductase chain 1, Nqo1 [140492]
        1. Thermus thermophilus [TaxId: 274] [140493] (4)
          SQ Q56222 334-438
          1. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with fes, fmn, sf4
            1. region 1:334-438 [134121] picpiclink
          2. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2FUG 1:334-438
            complexed with fes, fmn, sf4
            1. region a:334-438 [134134] picpiclink
          3. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2FUG 1:334-438
            complexed with fes, fmn, sf4
            1. region j:334-438 [134147] picpiclink
          4. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2FUG 1:334-438
            complexed with fes, fmn, sf4
            1. region s:334-438 [134160] picpiclink
  11. Bacillus cereus metalloprotein-like [158430] (1)
    Duplication: tandem repeat of two domains of this fold with similar sequences; binds a dimetal ion cluster between the repeats
    1. Bacillus cereus metalloprotein-like [158431] (2)
      1. Uncharacterized protein BCE_G9241_1042 [158432]
        1. Bacillus cereus [TaxId: 1396] [158433] (12)
          SQ Q4MW04 11-144! SQ Q4MW04 145-274
          1. 3d19 picpic
            complexed with fe, mg; mutant
            1. region a:11-144 [157176] picpiclink
          2. 3d19 picpic
            complexed with fe, mg; mutant
            1. region a:145-274 [157177] picpiclink
          3. 3d19 picpic
            automatically matched to 3D19 A:11-144
            complexed with fe, mg; mutant
            1. region b:14-144 [157178] picpiclink
          4. 3d19 picpic
            automatically matched to 3D19 A:145-274
            complexed with fe, mg; mutant
            1. region b:145-274 [157179] picpiclink
          5. 3d19 picpic
            automatically matched to 3D19 A:11-144
            complexed with fe, mg; mutant
            1. region c:18-144 [157180] picpiclink
          6. 3d19 picpic
            automatically matched to 3D19 A:145-274
            complexed with fe, mg; mutant
            1. region c:145-274 [157181] picpiclink
          7. 3d19 picpic
            automatically matched to 3D19 A:11-144
            complexed with fe, mg; mutant
            1. region d:16-144 [157182] picpiclink
          8. 3d19 picpic
            automatically matched to 3D19 A:145-274
            complexed with fe, mg; mutant
            1. region d:145-274 [157183] picpiclink
          9. 3d19 picpic
            automatically matched to 3D19 A:11-144
            complexed with fe, mg; mutant
            1. region e:18-144 [157184] picpiclink
          10. 3d19 picpic
            automatically matched to 3D19 A:145-274
            complexed with fe, mg; mutant
            1. region e:145-274 [157185] picpiclink
          11. 3d19 picpic
            automatically matched to 3D19 A:11-144
            complexed with fe, mg; mutant
            1. region f:18-144 [157186] picpiclink
          12. 3d19 picpic
            automatically matched to 3D19 A:145-274
            complexed with fe, mg; mutant
            1. region f:145-274 [157187] picpiclink
      2. Uncharacterized protein BCE_G9241_0798 [158434]
        1. Bacillus cereus [TaxId: 1396] [158435] (40)
          SQ Q4MWP8 125-259! SQ Q4MWP8 4-124
          1. 3dby picpic
            complexed with edo, fe
            1. region a:5-125 [157486] picpiclink
          2. 3dby picpic
            complexed with edo, fe
            1. region a:126-260 [157487] picpiclink
          3. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region b:5-125 [157488] picpiclink
          4. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region b:126-260 [157489] picpiclink
          5. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region c:5-125 [157490] picpiclink
          6. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region c:126-260 [157491] picpiclink
          7. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region d:5-125 [157492] picpiclink
          8. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region d:126-260 [157493] picpiclink
          9. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region e:5-125 [157494] picpiclink
          10. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region e:126-260 [157495] picpiclink
          11. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region f:5-125 [157496] picpiclink
          12. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region f:126-260 [157497] picpiclink
          13. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region g:5-125 [157498] picpiclink
          14. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region g:126-260 [157499] picpiclink
          15. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region h:5-125 [157500] picpiclink
          16. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region h:126-260 [157501] picpiclink
          17. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region i:5-125 [157502] picpiclink
          18. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region i:126-260 [157503] picpiclink
          19. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region j:5-125 [157504] picpiclink
          20. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region j:126-260 [157505] picpiclink
          21. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region k:5-125 [157506] picpiclink
          22. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region k:126-260 [157507] picpiclink
          23. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region l:5-125 [157508] picpiclink
          24. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region l:126-260 [157509] picpiclink
          25. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region m:5-125 [157510] picpiclink
          26. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region m:126-260 [157511] picpiclink
          27. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region n:5-125 [157512] picpiclink
          28. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region n:126-260 [157513] picpiclink
          29. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region o:5-125 [157514] picpiclink
          30. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region o:126-260 [157515] picpiclink
          31. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region p:5-125 [157516] picpiclink
          32. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region p:126-260 [157517] picpiclink
          33. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region q:5-125 [157518] picpiclink
          34. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region q:126-260 [157519] picpiclink
          35. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region r:5-125 [157520] picpiclink
          36. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region r:126-260 [157521] picpiclink
          37. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region s:5-125 [157522] picpiclink
          38. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region s:126-260 [157523] picpiclink
          39. 3dby picpic
            automatically matched to 3DBY A:5-125
            complexed with edo, fe
            1. region t:5-125 [157524] picpiclink
          40. 3dby picpic
            automatically matched to 3DBY A:126-260
            complexed with edo, fe
            1. region t:126-260 [157525] picpiclink
  12. Ta0600-like [158436] (1)
    1. Ta0600-like [158437] (2)
      Pfam 03685; UPF0147
      1. Uncharacterized protein MMP1188 [158438]
        1. Methanococcus maripaludis [TaxId: 39152] [158439] (4)
          SQ Q6LY05 4-91
          1. 2qzg picpic
            1. region a:4-91 [151482] picpiclink
          2. 2qzg picpic
            automatically matched to 2QZG A:4-91
            1. region b:4-91 [151483] picpiclink
          3. 2qzg picpic
            automatically matched to 2QZG A:4-91
            1. region c:4-90 [151484] picpiclink
          4. 2qzg picpic
            automatically matched to 2QZG A:4-91
            1. region d:6-90 [151485] picpiclink
      2. Uncharacterized protein Ta0600 [158440]
        1. Thermoplasma acidophilum [TaxId: 2303] [158441] (1)
          SQ Q9HKJ8 2-86
          1. 2qsb picpic
            complexed with so4
            1. region a:2-86 [151315] picpiclink
  13. DsbB-like [158442] (1)
    contains an extra helix in a long loop between helices 3 and 4
    1. DsbB-like [158443] (1)
      Pfam 02600
      1. Disulfide bond formation protein DsbB [158444]
        1. Escherichia coli [TaxId: 562] [158445] (1)
          SQ P0A6M2 14-162
          1. 2hi7 picpicxref
            complexed with uq1, zn; mutant
            1. region b:14-162 [145393] picpiclink
  14. IVS-encoded protein-like [158446] (1)
    IVS: Intervening sequence with conserved ORF in eubacterial 23S rRNA genes; forms a homopentamer with a toroid-shaped structure containing a tapered central channel
    1. IVS-encoded protein-like [158447] (2)
      Pfam 05635
      1. Uncharacterized protein XCC0516 [158448]
        1. Xanthomonas campestris pv. campestris [TaxId: 340] [158449] (5)
          SQ Q8PD29 9-125
          1. 2gsc picpic
            1. region a:9-125 [147169] picpiclink
          2. 2gsc picpic
            automatically matched to 2GSC A:9-125
            1. region b:9-123 [147170] picpiclink
          3. 2gsc picpic
            automatically matched to 2GSC A:9-125
            1. region c:9-122 [147171] picpiclink
          4. 2gsc picpic
            automatically matched to 2GSC A:9-125
            1. region d:9-123 [147172] picpiclink
          5. 2gsc picpic
            automatically matched to 2GSC A:9-125
            1. region e:10-121 [147173] picpiclink
      2. Uncharacterized protein BT0352 [158450]
        1. Bacteroides thetaiotaomicron [TaxId: 818] [158451] (5)
          SQ Q8AAW0 1-115
          1. 2rld picpic
            complexed with ca, cl, edo
            1. region a:1-115 [152150] picpiclink
          2. 2rld picpic
            automatically matched to 2RLD A:1-115
            complexed with ca, cl, edo
            1. region b:5-115 [152151] picpiclink
          3. 2rld picpic
            automatically matched to 2RLD A:1-115
            complexed with ca, cl, edo
            1. region c:1-115 [152152] picpiclink
          4. 2rld picpic
            automatically matched to 2RLD A:1-115
            complexed with ca, cl, edo
            1. region d:7-114 [152153] picpiclink
          5. 2rld picpic
            automatically matched to 2RLD A:1-115
            complexed with ca, cl, edo
            1. region e:8-115 [152154] picpiclink
  15. YqcC-like [158452] (1)
    1. YqcC-like [158453] (1)
      Pfam 04287; DUF446
      1. Hypothetical protein YqcC [158454]
        1. Escherichia coli [TaxId: 562] [158455] (1)
          SQ Q46919 1-109
          1. 2hgk picpic
            1. region a:1-109 [147284] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk