Structural Classification of Proteins
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Superfamily: Bromodomain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bromodomain-like [47363]
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. Superfamily: Bromodomain [47370]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Bromodomain [47371] (5)
    1. GCN5 [47372]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [47373] (1)
        1. 1e6i picpic
          complexed with acetylated H4 peptide
          1. chain a [16969] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [47374] (3)
        1. 3d7c picpic
          automatically matched to d1f68a_
          1. region a:731-832 [157420] picpiclink
        2. 3d7c picpic
          automatically matched to d1f68a_
          1. region b:731-832 [157421] picpiclink
        3. 1f68 picpic
          mutant
          1. chain a [16970] picpiclink
    2. P300/CAF histone acetyltransferase bromodomain [47375]
      1. Human (Homo sapiens) [TaxId: 9606] [47376] (7)
        1. 1wum picpic
          automatically matched to d1jm4b_
          complexed with np2
          1. region a:715-832 [121297] picpiclink
        2. 1zs5 picpic
          automatically matched to d1jm4b_
          complexed with mib
          1. region a:715-832 [125589] picpiclink
        3. 2rnw picpic
          automatically matched to d1jm4b_
          1. region a:715-832 [152173] picpiclink
        4. 2rnx picpic
          automatically matched to d1jm4b_
          1. region a:715-832 [152174] picpiclink
        5. 1wug picpic
          automatically matched to d1jm4b_
          complexed with np1
          1. region a:715-832 [121286] picpiclink
        6. 1jm4 picpic
          complexed with HIV-1 tat peptide, chain A
          complexed with aly
          1. chain b [71746] picpiclink
        7. 1n72 picpic
          1. chain a [80213] picpiclink
    3. TAFII250 double bromodomain module [47377]
      1. Human (Homo sapiens) [TaxId: 9606] [47378] (1)
        1. 1eqf picpic
          complexed with so4
          1. region a:1359-1497 [16972] picpiclink
          2. region a:1498-1625 [16973] picpiclink
    4. CREB-binding protein, CBP [74712]
      1. Human (Homo sapiens) [TaxId: 9606] [74713] (5)
        1. 3dwy picpic
          automatically matched to d1jspb_
          complexed with edo
          1. region a:1084-1197 [157925] picpiclink
        2. 3dwy picpic
          automatically matched to d1jspb_
          complexed with edo
          1. region b:1085-1196 [157926] picpiclink
        3. 2d82 picpic
          automatically matched to d1jspb_
          complexed with ttr
          1. region a:1077-1197 [131327] picpiclink
        4. 2rny picpic
          automatically matched to d1jspb_
          1. region a:1077-1197 [152175] picpiclink
        5. 1jsp picpic
          complexed with p53 peptide, chain A
          complexed with aly
          1. chain b [71843] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk