Structural Classification of Proteins
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Superfamily: IVS-encoded protein-like

IVS: Intervening sequence with conserved ORF in eubacterial 23S rRNA genes; forms a homopentamer with a toroid-shaped structure containing a tapered central channel

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bromodomain-like [47363]
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. Superfamily: IVS-encoded protein-like [158446]
    IVS: Intervening sequence with conserved ORF in eubacterial 23S rRNA genes; forms a homopentamer with a toroid-shaped structure containing a tapered central channel

Families:

  1. IVS-encoded protein-like [158447] (2)
    Pfam 05635
    1. Uncharacterized protein XCC0516 [158448]
      1. Xanthomonas campestris pv. campestris [TaxId: 340] [158449] (5)
        SQ Q8PD29 9-125
        1. 2gsc picpic
          1. region a:9-125 [147169] picpiclink
        2. 2gsc picpic
          automatically matched to 2GSC A:9-125
          1. region b:9-123 [147170] picpiclink
        3. 2gsc picpic
          automatically matched to 2GSC A:9-125
          1. region c:9-122 [147171] picpiclink
        4. 2gsc picpic
          automatically matched to 2GSC A:9-125
          1. region d:9-123 [147172] picpiclink
        5. 2gsc picpic
          automatically matched to 2GSC A:9-125
          1. region e:10-121 [147173] picpiclink
    2. Uncharacterized protein BT0352 [158450]
      1. Bacteroides thetaiotaomicron [TaxId: 818] [158451] (5)
        SQ Q8AAW0 1-115
        1. 2rld picpic
          complexed with ca, cl, edo
          1. region a:1-115 [152150] picpiclink
        2. 2rld picpic
          automatically matched to 2RLD A:1-115
          complexed with ca, cl, edo
          1. region b:5-115 [152151] picpiclink
        3. 2rld picpic
          automatically matched to 2RLD A:1-115
          complexed with ca, cl, edo
          1. region c:1-115 [152152] picpiclink
        4. 2rld picpic
          automatically matched to 2RLD A:1-115
          complexed with ca, cl, edo
          1. region d:7-114 [152153] picpiclink
        5. 2rld picpic
          automatically matched to 2RLD A:1-115
          complexed with ca, cl, edo
          1. region e:8-115 [152154] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk