Family: IVS-encoded protein-like

Pfam 05635

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: Bromodomain-like [47363]
   4 helices; bundle; minor mirror variant of up-and-down topology
4. Superfamily: IVS-encoded protein-like [158446]
   IVS: Intervening sequence with conserved ORF in eubacterial 23S rRNA genes; forms a homopentamer with a toroid-shaped structure containing a tapered central channel
5. Family: IVS-encoded protein-like [158447]
   Pfam 05635

Protein Domains:

1. Uncharacterized protein XCC0516 [158448]
   1. Xanthomonas campestris pv. campestris [TaxId: 340] [158449] (5)
      SQ Q8PD29 9-125
      1. 2gsc
         1. region a:9-125 [147169]
      2. 2gsc
         automatically matched to 2GSC A:9-125
         1. region b:9-123 [147170]
      3. 2gsc
         automatically matched to 2GSC A:9-125
         1. region c:9-122 [147171]
      4. 2gsc
         automatically matched to 2GSC A:9-125
         1. region d:9-123 [147172]
      5. 2gsc
         automatically matched to 2GSC A:9-125
         1. region e:10-121 [147173]
2. Uncharacterized protein BT0352 [158450]
   1. Bacteroides thetaiotaomicron [TaxId: 818] [158451] (5)
      SQ Q8AAW0 1-115
      1. 2rld
         complexed with ca, cl, edo
         1. region a:1-115 [152150]
      2. 2rld
         automatically matched to 2RLD A:1-115
         complexed with ca, cl, edo
         1. region b:5-115 [152151]
      3. 2rld
         automatically matched to 2RLD A:1-115
         complexed with ca, cl, edo
         1. region c:1-115 [152152]
      4. 2rld
         automatically matched to 2RLD A:1-115
         complexed with ca, cl, edo
         1. region d:7-114 [152153]
      5. 2rld
         automatically matched to 2RLD A:1-115
         complexed with ca, cl, edo
         1. region e:8-115 [152154]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk