Structural Classification of Proteins
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Fold: EF Hand-like

core: 4 helices; array of 2 hairpins, opened

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: EF Hand-like [47472]
    core: 4 helices; array of 2 hairpins, opened

Superfamilies:

  1. EF-hand [47473] (11)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
    link to SUPERFAMILY database - Superfamily
    1. Calbindin D9K [47474] (2) picpic
      made of two EF-hands only
    2. S100 proteins [47478] (17) picpic
      dimer: subunits are made of two EF-hands
    3. Polcalcin [89048] (3) picpic
      calcium-binding pollen allergen; two EF-hands per subunit
    4. Osteonectin [47489] (1) picpic
      5 helices; two EF-hands plus one of additional helices in the N-terminal part
    5. Parvalbumin [47492] (9) picpic
      6-helices; array of 3 hairpins, closed
      made with two-helical hairpin and two EF-hands
    6. Calmodulin-like [47502] (49) picpic
      Duplication: made with two pairs of EF-hands
    7. Eps15 homology domain (EH domain) [47543] (4) picpic
    8. Cbp40 (plasmodial specific CaII-binding protein LAV1-2) [81758] (1) picpic
      4 EF-hands assembled in a compact structure like the Penta-EF-hand proteins; contains additional N-terminal all-alpha subdomain
    9. Penta-EF-hand proteins [63550] (11) picpic
    10. EF-hand modules in multidomain proteins [47547] (8) picpic
    11. p25-alpha [140538] (2) picpic
      Pfam 05517; comprises two degenerate EF-hands and extra C-terminal helix, packed agains the bundle end
  2. Insect pheromone/odorant-binding proteins [47565] (1)
    the N-terminal extension, containing a few short helices, forms a flexible lid for the binding cavity
    link to SUPERFAMILY database - Superfamily
    1. Insect pheromone/odorant-binding proteins [47566] (6) picpic
  3. Hypothetical protein MTH865 [69025] (1)
    link to SUPERFAMILY database - Superfamily
    1. Hypothetical protein MTH865 [69026] (1) picpic
  4. Cloroperoxidase [47571] (1)
    duplication: consists of 2 similar domains composed of 2 EF hand-like motifs each
    link to SUPERFAMILY database - Superfamily
    1. Cloroperoxidase [47572] (1) picpic

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk