Family: RPB6

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: RPB6/omega subunit-like [63561]
   core: 2 helices and adjacent loops
4. Superfamily: RPB6/omega subunit-like [63562]
   the bacterial omega and eukaryotic RPB6 subunits both function in polymerase assembly; the common core is involved in conserved interactions with other subunits
   uperfamily
5. Family: RPB6 [55294]

Protein Domains:

1. RPB6 [55295]
   essential subunit of RNA polymerases I, II and III
   1. Human (Homo sapiens) [TaxId: 9606] [55296] (1)
      1. 1qkl
         1. chain a [39754]
   2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64318] (30)
      SQ P20435; part of multichain biological unit
      1. 1twf
         complexed with mn, utp, zn
         1. chain f [112731]
      2. 1i50
         complexed with mn, zn
         1. chain f [61760]
      3. 1k83
         complexed with ilx, mn, trx, zn
         1. chain f [68281]
      4. 3cqz
         automatically matched to d1i3qf_
         complexed with ilx, trx, zn
         1. region f:72-155 [156931]
      5. 1i3q
         complexed with mg, zn
         1. chain f [61613]
      6. 2nvq
         automatically matched to d1i3qf_
         complexed with dut, mg, zn
         1. region f:72-155 [138640]
      7. 1twc
         complexed with gtp, mn, zn
         1. chain f [112717]
      8. 1twa
         complexed with atp, mn, zn
         1. chain f [112702]
      9. 1i6h
         complexed with mg, zn
         1. chain f [61837]
      10. 1twh
          complexed with atp, mn, zn
          1. chain f [112757]
      11. 2r7z
          automatically matched to d1i3qf_
          complexed with cpt, mg, zn
          1. region f:72-155 [151661]
      12. 2r92
          automatically matched to d1i3qf_
          complexed with mg, zn
          1. region f:72-155 [151748]
      13. 1twg
          complexed with ctp, mn, zn
          1. chain f [112744]
      14. 2nvy
          automatically matched to d1i3qf_
          complexed with mn, zn
          1. region f:72-155 [138686]
      15. 2r93
          automatically matched to d1i3qf_
          complexed with mg, zn
          1. region f:72-155 [151757]
      16. 2e2i
          automatically matched to d1i3qf_
          complexed with dgt, mg, zn
          1. region f:72-155 [132000]
      17. 2vum
          automatically matched to d1i3qf_
          complexed with bru, ilx, mg, trx, zn
          1. region f:72-155 [153551]
      18. 2e2j
          automatically matched to d1i3qf_
          complexed with g2p, mg, zn
          1. region f:72-154 [132013]
      19. 2b63
          automatically matched to d1i3qf_
          complexed with 5bu, mg, zn
          1. region f:72-155 [127924]
      20. 2ja7
          automatically matched to d1i3qf_
          complexed with bru, mg, tt, zn
          1. region f:72-155 [138197]
      21. 2ja7
          automatically matched to d1i3qf_
          complexed with bru, mg, tt, zn
          1. region r:72-155 [138213]
      22. 2nvx
          automatically matched to d1i3qf_
          complexed with dut, mg, zn
          1. region f:72-155 [138673]
      23. 2nvt
          automatically matched to d1i3qf_
          complexed with g2p, mg, zn
          1. region f:72-155 [138653]
      24. 2ja5
          automatically matched to d1i3qf_
          complexed with bru, mg, zn
          1. region f:72-155 [138165]
      25. 2ja8
          automatically matched to d1i3qf_
          complexed with bru, mg, tt, zn
          1. region f:72-155 [138229]
      26. 2b8k
          automatically matched to d1i3qf_
          complexed with zn
          1. region f:72-155 [128083]
      27. 2ja6
          automatically matched to d1i3qf_
          complexed with bru, mg, tt, zn
          1. region f:72-155 [138181]
      28. 2yu9
          automatically matched to d1i3qf_
          complexed with mg, utp, zn
          1. region f:72-155 [140070]
      29. 2e2h
          automatically matched to d1i3qf_
          complexed with gtp, mg, zn
          1. region f:72-154 [131987]
      30. 2nvz
          automatically matched to d1i3qf_
          complexed with mg, utp, zn
          1. region f:72-154 [138699]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk