Structural Classification of Proteins
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Family: CopG-like

similar to the phage repressor family

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Ribbon-helix-helix [47597]
    core: 4 helices; array of 2 hairpins, opened
  4. Superfamily: Ribbon-helix-helix [47598]
    formerly Met repressor-like; dimeric proteins; the N-termini form a small beta-sheet ribbon
    link to SUPERFAMILY database - Superfamily
  5. Family: CopG-like [100970]
    similar to the phage repressor family

Protein Domains:

  1. Transcriptional repressor CopG [47605]
    plasmid-encoded
    1. Streptococcus agalactiae [TaxId: 1311] [47606] (3)
      1. 2cpg picpic
        1. chain a [17455] picpiclink
        2. chain b [17456] picpiclink
        3. chain c [17457] picpiclink
      2. 1ea4 picpic
        1. chain a [64861] picpiclink
        2. chain b [64862] picpiclink
        3. chain d [64863] picpiclink
        4. chain e [64864] picpiclink
        5. chain f [64865] picpiclink
        6. chain g [64866] picpiclink
        7. chain h [64867] picpiclink
        8. chain j [64868] picpiclink
        9. chain k [64869] picpiclink
        10. chain l [64870] picpiclink
      3. 1b01 picpic
        1. chain a [17458] picpiclink
        2. chain b [17459] picpiclink
  2. Plasmid partition protein ParG [101203]
    1. Salmonella enterica [TaxId: 28901] [101204] (1)
      1. 1p94 picpic
        1. chain a [94380] picpiclink
        2. chain b [94381] picpiclink
  3. Nickel responsive regulator NikR, N-terminal domain [101205]
    1. Escherichia coli [TaxId: 562] [101206] (11)
      1. 2hza picpicxrefxref
        automatically matched to d1q5va1
        complexed with 3cm, ni
        1. region a:1-48 [136907] picpiclink
      2. 2hza picpicxrefxref
        automatically matched to d1q5va1
        complexed with 3cm, ni
        1. region b:1-43 [136909] picpiclink
      3. 1q5v picpicxref
        1. region a:1-48 [95937] picpiclink
        2. region b:1-48 [95939] picpiclink
        3. region c:1-48 [95941] picpiclink
        4. region d:1-48 [95943] picpiclink
      4. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region a:1-48 [136916] picpiclink
      5. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region b:1-48 [136918] picpiclink
      6. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region c:1-48 [136920] picpiclink
      7. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region d:1-48 [136922] picpiclink
      8. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region e:1-48 [136924] picpiclink
      9. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region f:1-48 [136926] picpiclink
      10. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region g:1-48 [136928] picpiclink
      11. 2hzv picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1q5va1
        complexed with k, ni
        1. region h:1-48 [136930] picpiclink
    2. Archaeon Pyrococcus horikoshii [TaxId: 53953] [140543] (12)
      SQ O58316 1-50
      1. 2bj7 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, ni, pg4
        1. region a:1-50 [128608] picpiclink
      2. 2bj7 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, ni, pg4
        1. region b:1-50 [128610] picpiclink
      3. 2bj8 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, epe, ni, pg4
        1. region a:1-50 [128612] picpiclink
      4. 2bj8 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, epe, ni, pg4
        1. region b:1-50 [128614] picpiclink
      5. 2bj3 picpicxrefxrefxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
        1. region a:1-50 [128600] picpiclink
      6. 2bj3 picpicxrefxrefxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
        1. region b:2-50 [128602] picpiclink
      7. 2bj3 picpicxrefxrefxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
        1. region c:1-50 [128604] picpiclink
      8. 2bj3 picpicxrefxrefxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
        1. region d:2-50 [128606] picpiclink
      9. 2bj9 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with ni, pg4, po4
        1. region a:1-50 [128616] picpiclink
      10. 2bj9 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with ni, pg4, po4
        1. region b:1-50 [128618] picpiclink
      11. 2bj1 picpicxrefxref
        complexed with cl, ni
        1. region a:1-50 [128596] picpiclink
      12. 2bj1 picpicxrefxref
        automatically matched to 2BJ1 A:1-50
        complexed with cl, ni
        1. region b:1-50 [128598] picpiclink
  4. Uncharacterized protein HP0222 [158480]
    1. Helicobacter pylori [TaxId: 210] [158481] (2)
      SQ O25010 31-73
      1. 1x93 picpic
        1. region a:31-73 [145859] picpiclink
      2. 1x93 picpic
        automatically matched to 1X93 A:31-73
        1. region b:31-73 [145860] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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