Structural Classification of Proteins
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Fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin

4 helices; folded leaf; right-handed superhelix

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47698]
    4 helices; folded leaf; right-handed superhelix

Superfamilies:

  1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47699] (3)
    can be classified as disulfide-rich
    link to SUPERFAMILY database - Superfamily
    1. Plant lipid-transfer and hydrophobic proteins [47700] (7)
      1. Soybean hydrophobic protein [47701]
        1. Soybean (Glycine max) [TaxId: 3847] [47702] (1)
          1. 1hyp picpic
            1. chain a [17806] picpiclink
      2. Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) [47703]
        1. Wheat (Triticum aestivum), L. seeds [TaxId: 4565] [47704] (3)
          1. 1bwo picpic
            complexed with lpc
            1. chain a [17807] picpiclink
            2. chain b [17808] picpiclink
          2. 1cz2 picpic
            complexed with prostaglandin b2
            complexed with e2p
            1. chain a [17809] picpiclink
          3. 1gh1 picpic
            1. chain a [17810] picpiclink
        2. Barley (Hordeum vulgare) [TaxId: 4513] [47705] (4)
          1. 1mid picpic
            complexed with lap
            1. chain a [91280] picpiclink
          2. 1be2 picpic
            complexed with plm
            1. chain a [17812] picpiclink
          3. 1lip picpic
            1. chain a [17811] picpiclink
          4. 1jtb picpic
            complexed with coa, plm
            1. chain a [17813] picpiclink
        3. Maize (Zea mays) [TaxId: 4577] [47706] (11)
          1. 1fk5 picpic
            complexed with fmt, ola
            1. chain a [59866] picpiclink
          2. 1mzm picpic
            complexed with fmt, plm
            1. chain a [17814] picpiclink
          3. 1fk1 picpic
            complexed with dao, fmt
            1. chain a [59862] picpiclink
          4. 1fk3 picpic
            complexed with fmt, pam
            1. chain a [59864] picpiclink
          5. 1fk4 picpic
            complexed with fmt, ste
            1. chain a [59865] picpiclink
          6. 1fk2 picpic
            complexed with fmt, myr
            1. chain a [59863] picpiclink
          7. 1fk0 picpic
            complexed with crc, fmt
            1. chain a [59861] picpiclink
          8. 1mzl picpic
            1. chain a [17815] picpiclink
          9. 1fk7 picpic
            complexed with fmt, rcl
            1. chain a [59868] picpiclink
          10. 1fk6 picpic
            complexed with fmt, lnl
            1. chain a [59867] picpiclink
          11. 1afh picpic
            1. chain a [17816] picpiclink
        4. Rice (Oryza sativa) [TaxId: 4530] [47707] (5)
          SQ P23096 26-116
          1. 1rzl picpic
            complexed with cxs, so4
            1. chain a [17817] picpiclink
          2. 1uvc picpic
            complexed with ste
            1. chain a [113445] picpiclink
            2. chain b [113446] picpiclink
          3. 1uvb picpic
            complexed with pam
            1. chain a [113444] picpiclink
          4. 1uva picpic
            complexed with myr
            1. chain a [113443] picpiclink
          5. 1bv2 picpic
            1. chain a [17818] picpiclink
      3. Non-specific lipid-transfer protein homologue (ns-LTP2) [81787]
        different pattern for Cys-pairing compared with ns-LTP1
        1. Rice (Oryza sativa) [TaxId: 4530] [81788] (1)
          1. 1l6h picpic
            1. chain a [77723] picpiclink
        2. Triticum turgidum [TaxId: 4571] [89073] (2)
          1. 1tuk picpic
            automatically matched to d1n89a_
            complexed with iod, pgm
            1. region a:1-67 [119342] picpiclink
          2. 1n89 picpic
            complexed with pgm
            1. chain a [85392] picpiclink
    2. Proteinase/alpha-amylase inhibitors [47708] (3)
      1. 0.19 alpha-amylase inhibitor [47709]
        1. Wheat (Triticum aestivum) [TaxId: 4565] [47710] (1)
          1. 1hss picpic
            1. chain a [17819] picpiclink
            2. chain b [17820] picpiclink
            3. chain c [17821] picpiclink
            4. chain d [17822] picpiclink
      2. Trypsin/alpha-amylase inhibitor RBI [47711]
        1. Eleusine coracana, seeds [TaxId: 4511] [47712] (3)
          1. 1tmq picpicxrefxref
            complexed with ca, cl
            1. chain b [17824] picpiclink
          2. 1b1u picpic
            mutant
            1. chain a [17823] picpiclink
          3. 1bip picpic
            1. chain a [17825] picpiclink
      3. Hageman factor/amylase inhibitor [47713]
        1. Maize (Zea mays) [TaxId: 4577] [47714] (2)
          1. 1bea picpic
            1. chain a [17826] picpiclink
          2. 1bfa picpic
            1. chain a [17827] picpiclink
    3. Seed storage protein, 2S albumin [47715] (3)
      two chains result from a single-chain precursor
      1. Napin BNIb [47716]
        1. Rape (Brassica napus) [TaxId: 3708] [47717] (1)
          1. 1pnb picpic
            1. chain a,b [17828] picpiclink
      2. 2S albumin RicC3 [101228]
        1. Castor bean (Ricinus communis) [TaxId: 3988] [101229] (1)
          1. 1psy picpic
            1. chain a [95081] picpiclink
      3. Methionine-rich 2S protein (albumin 8) [109847]
        1. Common sunflower (Helianthus annuus) [TaxId: 4232] [109848] (1)
          SQ P23110
          1. 1s6d picpic
            1. chain a [105307] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk