Superfamily: TraM-like

uperfamily

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: TraM-like [140580]
   multihelical oligomeric protein; structure of whole subunit is not known; the N-terminal part is implicated in DNA binding, the middle region forms tetrameric parallel coiled coil, surrounded by the C-terminal helices
4. Superfamily: TraM-like [140581]
   uperfamily

Families:

1. TraM-like [140582] (2)
   Pfam 05261
   1. TraM [140583]
      also includes the N-terminal domain structure 1dp3, previously classified into a different family (scop_fa 63566)
      1. Escherichia coli [TaxId: 562] [140584] (2)
         SQ P10026 50-127! SQ P10026 60-167
         1. 2g7o
            1. region a:60-127 [134736]
         2. 2g9e
            mutant
            1. region a:60-127 [134799]
      2. Escherichia coli K12 (Escherichia coli K-12) [TaxId: 83333] [158509] (8)
         1. 3d8a
            automatically matched to d2g7oa1
            1. region a:60-122 [157448]
         2. 3d8a
            automatically matched to d2g7oa1
            1. region b:60-122 [157449]
         3. 3d8a
            automatically matched to d2g7oa1
            1. region c:60-122 [157450]
         4. 3d8a
            automatically matched to d2g7oa1
            1. region d:60-122 [157451]
         5. 3d8a
            automatically matched to d2g7oa1
            1. region e:60-122 [157452]
         6. 3d8a
            automatically matched to d2g7oa1
            1. region f:60-122 [157453]
         7. 3d8a
            automatically matched to d2g7oa1
            1. region g:60-122 [157454]
         8. 3d8a
            automatically matched to d2g7oa1
            1. region h:60-122 [157455]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk