Structural Classification of Proteins
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Family: DNA-binding domain of telomeric protein

part of Pfam 00249 (Myb/SANT domain)

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: Homeodomain-like [46689]
    consists only of helices
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA-binding domain of telomeric protein [46745]
    part of Pfam 00249 (Myb/SANT domain)

Protein Domains:

  1. DNA-binding domain of human telomeric protein, hTRF1 [46746]
    1. Human (Homo sapiens) [TaxId: 9606] [46747] (4)
      SQ P54274 379-430 # structure of dimerisation domain (62-265) is also known (scop_sp 63603)
      1. 1w0t picpic
        1. chain a [114070] picpiclink
        2. chain b [114071] picpiclink
      2. 1ity picpic
        1. chain a [71427] picpiclink
      3. 1iv6 picpic
        1. chain a [71441] picpiclink
      4. 1ba5 picpic
        1. chain a [16045] picpiclink
  2. Telomeric repeat binding factor 2, TRF2 [116784]
    1. Human (Homo sapiens) [TaxId: 9606] [116785] (4)
      SQ Q15554 446-500 # structure of dimerisation domain (43-245) is also known (scop_sp 63605)
      1. 1w0u picpic
        1. chain a [114072] picpiclink
        2. chain b [114073] picpiclink
      2. 1xg1 picpic
        1. region a:5-67 [121973] picpiclink
      3. 1vf9 picpic
        automatically matched to 1XG1 A:5-67
        1. region a:438-500 [120031] picpiclink
      4. 1vfc picpic
        automatically matched to 1XG1 A:5-67
        1. region a:438-500 [120032] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk