Family: RNA polymerase subunit RPB10

Zn-binding site is near the N-terminus

Lineage:

1. Root: scop
2. Class: All alpha proteins [46456]
3. Fold: DNA/RNA-binding 3-helical bundle [46688]
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
4. Superfamily: RNA polymerase subunit RPB10 [46924]
   uperfamily
5. Family: RNA polymerase subunit RPB10 [46925]
   Zn-binding site is near the N-terminus

Protein Domains:

1. RNA polymerase subunit RPB10 [46926]
   1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [46927] (1)
      1. 1ef4
         complexed with zn
         1. chain a [16272]
   2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [63490] (30)
      SQ P22139; part of multichain biological unit
      1. 1twf
         complexed with mn, utp, zn
         1. chain j [112735]
      2. 1i50
         complexed with mn, zn
         1. chain j [61764]
      3. 1k83
         complexed with ilx, mn, trx, zn
         1. chain j [68285]
      4. 3cqz
         automatically matched to d1i3qj_
         complexed with ilx, trx, zn
         1. region j:1-65 [156933]
      5. 1i3q
         complexed with mg, zn
         1. chain j [61617]
      6. 2nvq
         automatically matched to d1i3qj_
         complexed with dut, mg, zn
         1. region j:1-65 [138644]
      7. 1twc
         complexed with gtp, mn, zn
         1. chain j [112721]
      8. 1twa
         complexed with atp, mn, zn
         1. chain j [112706]
      9. 1i6h
         complexed with mg, zn
         1. chain j [61841]
      10. 1twh
          complexed with atp, mn, zn
          1. chain j [112761]
      11. 2r7z
          automatically matched to d1i3qj_
          complexed with cpt, mg, zn
          1. region j:1-65 [151664]
      12. 2r92
          automatically matched to d1i3qj_
          complexed with mg, zn
          1. region j:1-65 [151751]
      13. 1twg
          complexed with ctp, mn, zn
          1. chain j [112748]
      14. 2nvy
          automatically matched to d1i3qj_
          complexed with mn, zn
          1. region j:1-65 [138690]
      15. 2r93
          automatically matched to d1i3qj_
          complexed with mg, zn
          1. region j:1-65 [151760]
      16. 2e2i
          automatically matched to d1i3qj_
          complexed with dgt, mg, zn
          1. region j:1-65 [132004]
      17. 2vum
          automatically matched to d1i3qj_
          complexed with bru, ilx, mg, trx, zn
          1. region j:1-65 [153554]
      18. 2e2j
          automatically matched to d1i3qj_
          complexed with g2p, mg, zn
          1. region j:1-65 [132017]
      19. 2b63
          automatically matched to d1i3qj_
          complexed with 5bu, mg, zn
          1. region j:1-65 [127929]
      20. 2ja7
          automatically matched to d1i3qj_
          complexed with bru, mg, tt, zn
          1. region j:1-65 [138203]
      21. 2ja7
          automatically matched to d1i3qj_
          complexed with bru, mg, tt, zn
          1. region v:1-65 [138219]
      22. 2nvx
          automatically matched to d1i3qj_
          complexed with dut, mg, zn
          1. region j:1-65 [138677]
      23. 2nvt
          automatically matched to d1i3qj_
          complexed with g2p, mg, zn
          1. region j:1-65 [138657]
      24. 2ja5
          automatically matched to d1i3qj_
          complexed with bru, mg, zn
          1. region j:1-65 [138171]
      25. 2ja8
          automatically matched to d1i3qj_
          complexed with bru, mg, tt, zn
          1. region j:1-65 [138235]
      26. 2b8k
          automatically matched to d1i3qj_
          complexed with zn
          1. region j:1-65 [128089]
      27. 2ja6
          automatically matched to d1i3qj_
          complexed with bru, mg, tt, zn
          1. region j:1-65 [138187]
      28. 2yu9
          automatically matched to d1i3qj_
          complexed with mg, utp, zn
          1. region j:1-65 [140074]
      29. 2e2h
          automatically matched to d1i3qj_
          complexed with gtp, mg, zn
          1. region j:1-65 [131991]
      30. 2nvz
          automatically matched to d1i3qj_
          complexed with mg, utp, zn
          1. region j:1-65 [138703]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk