Structural Classification of Proteins
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Family: GntR-like transcriptional regulators

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: "Winged helix" DNA-binding domain [46785]
    contains a small beta-sheet (wing)
    link to SUPERFAMILY database - Superfamily
  5. Family: GntR-like transcriptional regulators [46804]

Protein Domains:

  1. Fatty acid responsive transcription factor FadR, N-terminal domain [46805]
    1. Escherichia coli [TaxId: 562] [46806] (5)
      1. 1hw1 picpicxref
        complexed with so4, zn
        1. region a:5-78 [16111] picpiclink
        2. region b:5-78 [16112] picpiclink
      2. 1e2x picpicxref
        CASP4
        complexed with so4
        1. region a:6-78 [16113] picpiclink
      3. 1h9g picpicxref
        complexed with coa, myr
        1. region a:5-78 [60827] picpiclink
      4. 1hw2 picpicxref
        protein/DNA complex; complexed with mg
        1. region a:7-78 [16114] picpiclink
        2. region b:7-78 [16115] picpiclink
      5. 1h9t picpicxref
        complex with fadB operator
        complexed with au, cl
        1. region a:5-78 [60847] picpiclink
        2. region b:5-78 [60849] picpiclink
  2. Transcriptional repressor TraR, N-terminal domain [140257]
    1. Streptomyces sp. [TaxId: 1931] [140258] (1)
      SQ Q54677 1-99
      78% identity to the UniProt entry species
      1. 1v4r picpic
        1. region a:1-100 [119835] picpiclink
  3. Transcriptional regulator YydK [158280]
    1. Bacillus subtilis [TaxId: 1423] [158281] (3)
      SQ Q45591 5-82
      1. 3bwg picpicxrefxrefxref
        complexed with edo
        1. region a:5-82 [155693] picpiclink
      2. 3bwg picpicxrefxrefxref
        automatically matched to 3BWG A:5-82
        complexed with edo
        1. region b:5-81 [155695] picpiclink
      3. 3bwg picpicxrefxrefxref
        automatically matched to 3BWG A:5-82
        complexed with edo
        1. region c:5-79 [155697] picpiclink
  4. Putative transcriptional regulator RHA1_ro03477 [158282]
    1. Rhodococcus sp. RHA1 [TaxId: 101510] [158283] (1)
      SQ Q0SB06 25-93
      1. 2hs5 picpicxref
        complexed with act
        1. region a:25-93 [147379] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk