Structural Classification of Proteins
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Family: PadR-like

Pfam 03551; related to the MarR-like family (Pfam 01047)

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: "Winged helix" DNA-binding domain [46785]
    contains a small beta-sheet (wing)
    link to SUPERFAMILY database - Superfamily
  5. Family: PadR-like [116807]
    Pfam 03551; related to the MarR-like family (Pfam 01047)

Protein Domains:

  1. Predicted transcriptional regulator [116808]
    monomeric
    1. Clostridium thermocellum [TaxId: 1515] [116809] (1)
      SQ Q4CEJ8 4-106
      1. 1xma picpic
        complexed with hg, unx
        1. chain a [115477] picpiclink
        2. chain b [115478] picpiclink
  2. Hypothetical protein AphA [116810]
    contains extra C-terminal dimerisation domain
    1. Vibrio cholerae [TaxId: 666] [116811] (1)
      SQ Q9X399 # "winged helix" domain: 1-87, dimerisation domain: 91-179
      1. 1yg2 picpic
        Structural genomics target
        1. chain a [116681] picpiclink
  3. Hypothetical protein TM0937 [140277]
    1. Thermotoga maritima [TaxId: 2336] [140278] (1)
      SQ Q9X035 4-117
      1. 2esh picpic
        complexed with ca
        1. region a:4-117 [132325] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk