Structural Classification of Proteins
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Superfamily: SAM/Pointed domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: SAM/Pointed domain [47769]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Pointed domain [47770] (7)
    1. Ets-1 transcription factor pointed domain [47771]
      1. Mouse (Mus musculus) [TaxId: 10090] [47772] (1)
        1. 1bqv picpic
          CASP3
          1. chain a [17932] picpiclink
    2. Etv6 transcription factor pointed domain (Tel SAM) [74735]
      1. Human (Homo sapiens) [TaxId: 9606] [74736] (2)
        1. 1ji7 picpic
          complexed with mse, so4
          1. chain a [71682] picpiclink
          2. chain b [71683] picpiclink
          3. chain c [71684] picpiclink
        2. 1lky picpic
          complexed with so4; mutant
          1. chain a [73985] picpiclink
          2. chain c [73987] picpiclink
          3. chain e [73989] picpiclink
          4. chain b [73986] picpiclink
          5. chain d [73988] picpiclink
          6. chain f [73990] picpiclink
      2. Escherichia coli [TaxId: 562] [158525] (2)
        1. 2qb0 picpic
          automatically matched to d1ji7c_
          complexed with mn
          1. region a:15-91 [150324] picpiclink
        2. 2qb0 picpic
          automatically matched to d1ji7c_
          complexed with mn
          1. region c:15-91 [150325] picpiclink
    3. Ets DNA-binding protein pokkuri (Yan) [109863]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [109864] (2)
        SQ Q01842 42-118
        1. 1sv0 picpicxref
          mutant
          1. chain a [106035] picpiclink
          2. chain b [106036] picpiclink
        2. 1sv4 picpic
          mutant
          1. chain a [106041] picpiclink
          2. chain b [106042] picpiclink
    4. Modulator of the activity of Ets (MAE, CG15085-PA) [109865]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [109866] (1)
        SQ Q9I7G2 94-173
        1. 1sv0 picpicxref
          mutant
          1. chain c [106037] picpiclink
          2. chain d [106038] picpiclink
    5. GABP-alpha subunit [109867]
      1. Mouse (Mus musculus) [TaxId: 10090] [109868] (1)
        SQ Q00422 168-254 # structure of the Ets domain (320-429) is also known (scop_sp 46868)
        1. 1sxd picpic
          1. chain a [106079] picpiclink
    6. Transcriptional regulator ERG [109869]
      1. Human (Homo sapiens) [TaxId: 9606] [109870] (1)
        SQ P11308 115-208
        1. 1sxe picpic
          1. chain a [106080] picpiclink
  2. SAM (sterile alpha motif) domain [47773] (16)
    1. EphA4 receptor tyrosine kinases [47774]
      1. Mouse (Mus musculus) [TaxId: 10090] [47775] (1)
        1. 1b0x picpic
          1. chain a [17933] picpiclink
    2. EphB2 receptor [47776]
      1. Human (Homo sapiens) [TaxId: 9606] [47777] (2)
        1. 1b4f picpic
          1. chain a [17934] picpiclink
          2. chain b [17935] picpiclink
          3. chain c [17936] picpiclink
          4. chain d [17937] picpiclink
          5. chain e [17938] picpiclink
          6. chain f [17939] picpiclink
          7. chain g [17940] picpiclink
          8. chain h [17941] picpiclink
        2. 1f0m picpic
          1. chain a [17942] picpiclink
      2. Chicken (Gallus gallus) [TaxId: 9031] [47778] (1)
        1. 1sgg picpic
          1. chain a [17943] picpiclink
    3. C-terminal domain of p73 [47779]
      1. Human (Homo sapiens) [TaxId: 9606] [47780] (2)
        1. 1dxs picpic
          1. chain a [17944] picpiclink
        2. 1cok picpic
          1. chain a [17945] picpiclink
    4. Polyhomeotic [74737]
      1. Drosophila melanogaster [TaxId: 7227] [74738] (3)
        1. 1kw4 picpic
          complexed with mse; mutant
          1. chain a [73077] picpiclink
        2. 1pk1 picpicxrefxref
          mutant
          1. region a:12-79 [118711] picpiclink
        3. 1pk1 picpicxrefxref
          automatically matched to 1PK1 A:12-79
          mutant
          1. region c:13-78 [118713] picpiclink
    5. RNA-binding protein Smaug [89075]
      1. Drosophila melanogaster [TaxId: 7227] [89076] (1)
        1. 1oxj picpicxref
          1. region a:594-655 [87517] picpiclink
    6. Ephrin type-A receptor 8, C-terminal domain [101242]
      1. Human (Homo sapiens) [TaxId: 9606] [101243] (1)
        1. 1ucv picpic
          1. chain a [99191] picpiclink
    7. Ste50p, N-terminal domain [101244]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [101245] (2)
        1. 1z1v picpic
          automatically matched to d1uqva_
          1. region a:33-102 [124365] picpiclink
        2. 1uqv picpic
          1. chain a [99798] picpiclink
    8. Serine/threonine-protein kinase ste11 [101246]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [101247] (3)
        1. 1ow5 picpic
          1. chain a [93630] picpiclink
        2. 1x9x picpic
          automatically matched to d1ow5a_
          1. region a:8-67 [121829] picpiclink
        3. 1x9x picpic
          automatically matched to d1ow5a_
          1. region b:91-150 [121830] picpiclink
    9. Sam-domain protein samsn-1 [101248]
      1. Mouse (Mus musculus) [TaxId: 10090] [101249] (1)
        1. 1v38 picpic
          1. chain a [100280] picpiclink
    10. C-terminal domain of p63 [116934]
      1. Human (Homo sapiens) [TaxId: 9606] [116935] (1)
        SQ Q9H3D4 544-610
        1. 1rg6 picpic
          1. chain a [111800] picpiclink
    11. Sh3 and multiple ankyrin repeat domains 3 (Shank3) [140616]
      1. Rat(Rattus norvegicus) [TaxId: 10116] [140617] (6)
        SQ Q9JLU4 1749-1815
        1. 2f3n picpic
          mutant
          1. region a:2-65 [132885] picpiclink
        2. 2f3n picpic
          automatically matched to 2F3N A:2-65
          mutant
          1. region b:2-65 [132886] picpiclink
        3. 2f3n picpic
          automatically matched to 2F3N A:2-65
          mutant
          1. region c:2-63 [132887] picpiclink
        4. 2f44 picpic
          automatically matched to 2F3N A:2-65
          complexed with cl, zn; mutant
          1. region a:2-65 [132911] picpiclink
        5. 2f44 picpic
          automatically matched to 2F3N A:2-65
          complexed with cl, zn; mutant
          1. region b:2-65 [132912] picpiclink
        6. 2f44 picpic
          automatically matched to 2F3N A:2-65
          complexed with cl, zn; mutant
          1. region c:2-63 [132913] picpiclink
    12. Connector enhancer of kinase suppressor of Ras 1, CNK1 [140618]
      1. Human (Homo sapiens) [TaxId: 9606] [140619] (1)
        SQ Q969H4 1-78
        1. 1wwv picpic
          1. region a:8-85 [121378] picpiclink
    13. Polycomb protein Scm [140620]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [140621] (5)
        SQ Q9VHA0 795-871
        1. 1pk3 picpic
          complexed with bme; mutant
          1. region a:17-79 [118715] picpiclink
        2. 1pk3 picpic
          automatically matched to 1PK3 A:17-79
          complexed with bme; mutant
          1. region b:17-79 [118716] picpiclink
        3. 1pk3 picpic
          automatically matched to 1PK3 A:17-79
          complexed with bme; mutant
          1. region c:17-79 [118717] picpiclink
        4. 1pk1 picpicxrefxref
          mutant
          1. region b:17-79 [118712] picpiclink
        5. 1pk1 picpicxrefxref
          automatically matched to 1PK1 B:17-79
          mutant
          1. region d:17-79 [118714] picpiclink
    14. Sphingomyelin synthase 1, SMS1 [140622]
      Phosphatidylcholine:ceramide cholinephosphotransferase 1
      1. Mouse (Mus musculus) [TaxId: 10090] [140623] (1)
        SQ Q8VCQ6 1-84
        1. 2d8c picpic
          1. region a:7-91 [131328] picpiclink
    15. Centaurin-delta 1 (Arap2) [140624]
      1. Human(Homo sapiens) [TaxId: 9606] [140625] (1)
        SQ Q8WZ64 1-78
        1. 1x40 picpic
          1. region a:8-85 [121675] picpiclink
  3. Variant SAM domain [158526] (2)
    shares a sequence motif with Pfam 07647, but has a distinct packing of helices
    1. Deleted in Liver Cancer 2, DLC2 [158527]
      1. Human (Homo sapiens) [TaxId: 9606] [158528] (2)
        SQ Q9Y3M8 50-120
        1. 2h80 picpic
          1. region a:11-81 [147238] picpiclink
        2. 2jw2 picpic
          automatically matched to 2H80 A:11-81
          1. region a:11-81 [148224] picpiclink
    2. Deleted in liver cancer 1 protein, DLC-1 [158529]
      1. Human (Homo sapiens) [TaxId: 9606] [158530] (2)
        SQ Q96QB1 1-76! SQ Q96QB1 1-78
        1. 2dky picpic
          1. region a:8-85 [146539] picpiclink
        2. 2gyt picpic
          1. region a:1-76 [147195] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk