Superfamily: Membrane ion channel-forming peptide antibiotics containing D-aminoacids

uperfamily

Lineage:

1. Root: scop
2. Class: Peptides [58231]
   Peptides and fragments. Not a true class
3. Fold: Membrane ion channel-forming peptide antibiotics containing D-aminoacids [58232]
4. Superfamily: Membrane ion channel-forming peptide antibiotics containing D-aminoacids [58233]
   uperfamily

Families:

1. Gramicidin [58234] (1)
   1. Gramicidin [58235]
      different conformations
      1. Bacillus brevis [TaxId: 1393] [58236] (21)
         1. 1alz
            1. chain a [46039]
            2. chain b [46040]
         2. 1al4
            1. chain a [46041]
            2. chain b [46042]
         3. 1alx
            1. chain a [46043]
            2. chain b [46044]
         4. 1tk2
            complexed with ca, orn
            1. chain y [107068]
         5. 1av2
            1. chain a [46045]
            2. chain b [46046]
            3. chain c [46047]
            4. chain d [46048]
         6. 1bdw
            1. chain a [46031]
            2. chain b [46032]
         7. 1c4d
            1. chain a [46049]
            2. chain b [46050]
            3. chain c [46051]
            4. chain d [46052]
         8. 1gmk
            1. chain a [46053]
            2. chain b [46054]
            3. chain c [46055]
            4. chain d [46056]
         9. 1mic
            1. chain a [46037]
            2. chain b [46038]
         10. 1mag
             1. chain a [46033]
             2. chain b [46034]
         11. 1tkq
             Mini-gramicidin A
             1. chain a [107108]
             2. chain b [107109]
         12. 1ng8
             1. chain a [80478]
             2. chain b [80479]
         13. 1nrm
             1. chain a [80695]
             2. chain b [80696]
         14. 1nru
             1. chain a [80697]
             2. chain b [80698]
         15. 1nt5
             1. chain a [80726]
             2. chain b [80727]
         16. 1nt6
             1. chain a [80728]
             2. chain b [80729]
         17. 1kqe
             1. chain a [77486]
             2. chain b [77487]
         18. 1jno
             1. chain a [63198]
             2. chain b [63199]
         19. 1jo3
             1. chain a [63203]
             2. chain b [63204]
         20. 1jo4
             1. chain a [63205]
             2. chain b [63206]
         21. 1grm
             1. chain a [46035]
             2. chain b [46036]
2. Peptaibol [58237] (8)
   1. Chrysospermin C [58238]
      1. Hypomyces chrysospermus, congruent with Apiocrea chrysosperma [TaxId: 5131] [58239] (1)
         1. 1ee7
            1. chain a [46057]
   2. Zervamicin IIb [70003]
      1. Emericellopsis salmosynnemata [TaxId: 118885] [70004] (2)
         1. 1r9u
            1. chain a [111749]
         2. 1ih9
            1. chain a [66141]
   3. Antiamoebin I [82954]
      1. Emericellopsis [TaxId: 45244] [82955] (1)
         1. 1gq0
            1. chain a [76263]
   4. Alamecitin [58241]
      1. Trichoderma viride [TaxId: 5547] [58242] (1)
         1. 1amt
            1. chain a [46058]
            2. chain b [46059]
            3. chain c [46060]
   5. Trichotoxin_a50e [82956]
      1. Trichoderma viride [TaxId: 5547] [82957] (1)
         1. 1m24
            1. chain a [78466]
            2. chain b [78467]
   6. Cephaibol A [103698]
      1. Acremonium tubakii [TaxId: 146077] [103699] (1)
         1. 1ob4
            1. chain a [92749]
   7. Cephaibol B [103700]
      1. Acremonium tubakii [TaxId: 146077] [103701] (1)
         1. 1ob6
            1. chain a [92750]
            2. chain b [92751]
   8. Cephaibol C [103702]
      1. Acremonium tubakii [TaxId: 146077] [103703] (1)
         1. 1ob7
            1. chain a [92752]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk