Structural Classification of Proteins
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Fold: Arg-rich RNA binding peptides

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: Arg-rich RNA binding peptides [58321]

Superfamilies:

  1. 30S ribosomal protein THX [58322] (1)
    link to SUPERFAMILY database - Superfamily
    1. 30S ribosomal protein THX [58323] (1)
      1. 30S ribosomal protein THX [58324]
        1. Thermus thermophilus [TaxId: 274] [58325] (44) picpic
          SQ P62612
  2. HIV-1 REV fragments [58326] (1)
    link to SUPERFAMILY database - Superfamily
    1. HIV-1 REV fragments [58327] (1)
      1. HIV-1 REV fragments [58328]
        1. Human immunodeficiency virus type 1 [TaxId: 11676] [58329] (6) picpic
  3. RSG-1.2 peptide [58330] (1)
    link to SUPERFAMILY database - Superfamily
    1. RSG-1.2 peptide [58331] (1)
      1. RSG-1.2 peptide [58332]
        1. Human immunodeficiency virus type 1 [TaxId: 11676] [58333] (1) picpic
  4. TAT peptides [58334] (1)
    link to SUPERFAMILY database - Superfamily
    1. TAT peptides [58335] (2)
      1. TAT peptides [58336]
        1. Human immunodeficiency virus type 1 [TaxId: 11676] [58337] (1) picpic
        2. Bovine immunodeficiency virus [TaxId: 11657] [58338] (2) picpic
  5. Box B RNA-binding N peptide [58339] (1)
    link to SUPERFAMILY database - Superfamily
    1. Box B RNA-binding N peptide [58340] (4)
      1. Box B RNA-binding N peptide [58341]
        1. Salmonella bacteriophage P22 [TaxId: 10754] [58342] (1) picpic
        2. Bacteriophage lambda [TaxId: 10710] [58343] (1) picpic
        3. Bacteriophage HK022 [TaxId: 10742] [70007] (1) picpic
        4. Bacteriophage phi-21 [TaxId: 10737] [90280] (1) picpic
  6. HTLV-1 peptide [58344] (1)
    link to SUPERFAMILY database - Superfamily
    1. HTLV-1 peptide [58345] (1)
      1. HTLV-1 peptide [58346]
        bound to its RNA aptamer target
        1. Synthetic [58347] (1) picpic
  7. Ilarvirus coat protein N-terminal fragment [118396] (1)
    link to SUPERFAMILY database - Superfamily
    1. Ilarvirus coat protein N-terminal fragment [118397] (1)
      N-terminal part of Pfam 01787; RNA-binding helix
      1. Ilarvirus coat protein N-terminal fragment [118398]
        1. Alfalfa mosaic virus (strain YSMV) [TaxId: 12325] [118399] (1) picpic
          SQ P24264 1-26
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk