Structural Classification of Proteins
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Fold: Antimicrobial beta-hairpin

contains beta-hairpin crosslinked by disulfide bridge(s)

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: Antimicrobial beta-hairpin [58251]
    contains beta-hairpin crosslinked by disulfide bridge(s)

Superfamilies:

  1. Antimicrobial beta-hairpin [58252] (8)
    not a true superfamily
    link to SUPERFAMILY database - Superfamily
    1. Insect defense peptide thanatin [58256] (1)
      1. Insect defense peptide thanatin [58257]
        1. Podisus maculiventris [TaxId: 29025] [58258] (1)
          1. 8tfv picpic
            1. chain a [46071] picpiclink
    2. Androctonin [58259] (1)
      1. Androctonin [58260]
        1. Scorpion (Androctonus australis) [TaxId: 6858] [58261] (1)
          1. 1cz6 picpic
            1. chain a [46072] picpiclink
    3. Gomesin [75725] (1)
      1. Gomesin [75726]
        1. Mygalomorphae spider (Acanthoscurria gomesiana) [TaxId: 115339] [75727] (1)
          1. 1kfp picpic
            1. chain a [72423] picpiclink
    4. Tachyplesin I [82958] (2)
      1. Tachyplesin I [82959]
        horseshoe crab antimicrobial peptide
        1. Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853] [82960] (4)
          1. 1ma5 picpic
            1. chain a [78885] picpiclink
          2. 1ma2 picpic
            1. chain a [78882] picpiclink
          3. 1ma4 picpic
            1. chain a [78884] picpiclink
          4. 1ma6 picpic
            1. chain a [78886] picpiclink
        2. synthetic, polyphemusin I [111497] (1)
          1. 1rkk picpic
            1. chain a [104966] picpiclink
    5. theta defensin-like [58262] (2)
      1. Protegrin 1 (PG1) [58263]
        1. Pig (Sus scrofa) [TaxId: 9823] [58264] (1)
          1. 1pg1 picpic
            1. chain a [46073] picpiclink
      2. RTD-1 [64621]
        a cyclic antimicrobial defensin from rhesus macaque leukocytes
        1. Synthetic, based on Rhesus macaque sequence [64622] (1)
          1. 1hvz picpic
            1. chain a [61295] picpiclink
    6. Lactoferricin B (lfcinb) [58265] (1)
      1. Lactoferricin B (lfcinb) [58266]
        Antimicrobial peptide derived from bovine lactoferrin
        1. Synthetic, based on Bos taurus sequence [58267] (1)
          1. 1lfc picpic
            1. chain a [46074] picpiclink
    7. Hepcidin [82961] (2)
      1. Hepcidin [82962]
        1. Synthetic, based on human sequence [82963] (2)
          1. 1m4e picpic
            hepcidin-20
            1. chain a [78600] picpiclink
          2. 1m4f picpic
            hepcidin-25
            1. chain a [78601] picpiclink
        2. synthetic, based on the hybrid white striped bass sequence [118385] (1)
          SQ P82951 65-85
          1. 1s6w picpic
            1. chain a [112043] picpiclink
    8. Cyclic trypsin inhibitor STFI-1 [90265] (1)
      1. Cyclic trypsin inhibitor STFI-1 [90266]
        1. Sunflower (Helianthus annuus l.) [TaxId: 4232] [90267] (2)
          1. 1o8y picpic
            an acyclic permutant
            1. chain a [86682] picpiclink
          2. 1o8z picpic
            an acyclic permutant
            1. chain a [86683] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk