Structural Classification of Proteins
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Superfamily: Antimicrobial beta-hairpin

not a true superfamily
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: Antimicrobial beta-hairpin [58251]
    contains beta-hairpin crosslinked by disulfide bridge(s)
  4. Superfamily: Antimicrobial beta-hairpin [58252]
    not a true superfamily
    link to SUPERFAMILY database - Superfamily

Families:

  1. Insect defense peptide thanatin [58256] (1)
    1. Insect defense peptide thanatin [58257]
      1. Podisus maculiventris [TaxId: 29025] [58258] (1)
        1. 8tfv picpic
          1. chain a [46071] picpiclink
  2. Androctonin [58259] (1)
    1. Androctonin [58260]
      1. Scorpion (Androctonus australis) [TaxId: 6858] [58261] (1)
        1. 1cz6 picpic
          1. chain a [46072] picpiclink
  3. Gomesin [75725] (1)
    1. Gomesin [75726]
      1. Mygalomorphae spider (Acanthoscurria gomesiana) [TaxId: 115339] [75727] (1)
        1. 1kfp picpic
          1. chain a [72423] picpiclink
  4. Tachyplesin I [82958] (2)
    1. Tachyplesin I [82959]
      horseshoe crab antimicrobial peptide
      1. Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853] [82960] (4)
        1. 1ma5 picpic
          1. chain a [78885] picpiclink
        2. 1ma2 picpic
          1. chain a [78882] picpiclink
        3. 1ma4 picpic
          1. chain a [78884] picpiclink
        4. 1ma6 picpic
          1. chain a [78886] picpiclink
      2. synthetic, polyphemusin I [111497] (1)
        1. 1rkk picpic
          1. chain a [104966] picpiclink
  5. theta defensin-like [58262] (2)
    1. Protegrin 1 (PG1) [58263]
      1. Pig (Sus scrofa) [TaxId: 9823] [58264] (1)
        1. 1pg1 picpic
          1. chain a [46073] picpiclink
    2. RTD-1 [64621]
      a cyclic antimicrobial defensin from rhesus macaque leukocytes
      1. Synthetic, based on Rhesus macaque sequence [64622] (1)
        1. 1hvz picpic
          1. chain a [61295] picpiclink
  6. Lactoferricin B (lfcinb) [58265] (1)
    1. Lactoferricin B (lfcinb) [58266]
      Antimicrobial peptide derived from bovine lactoferrin
      1. Synthetic, based on Bos taurus sequence [58267] (1)
        1. 1lfc picpic
          1. chain a [46074] picpiclink
  7. Hepcidin [82961] (2)
    1. Hepcidin [82962]
      1. Synthetic, based on human sequence [82963] (2)
        1. 1m4e picpic
          hepcidin-20
          1. chain a [78600] picpiclink
        2. 1m4f picpic
          hepcidin-25
          1. chain a [78601] picpiclink
      2. synthetic, based on the hybrid white striped bass sequence [118385] (1)
        SQ P82951 65-85
        1. 1s6w picpic
          1. chain a [112043] picpiclink
  8. Cyclic trypsin inhibitor STFI-1 [90265] (1)
    1. Cyclic trypsin inhibitor STFI-1 [90266]
      1. Sunflower (Helianthus annuus l.) [TaxId: 4232] [90267] (2)
        1. 1o8y picpic
          an acyclic permutant
          1. chain a [86682] picpiclink
        2. 1o8z picpic
          an acyclic permutant
          1. chain a [86683] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk