Structural Classification of Proteins
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Superfamily: Antimicrobial beta-hairpin

not a true superfamily
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: Antimicrobial beta-hairpin [58251]
    contains beta-hairpin crosslinked by disulfide bridge(s)
  4. Superfamily: Antimicrobial beta-hairpin [58252]
    not a true superfamily
    link to SUPERFAMILY database - Superfamily

Families:

  1. Insect defense peptide thanatin [58256] (1)
    1. Insect defense peptide thanatin [58257]
      1. Podisus maculiventris [TaxId: 29025] [58258] (1) picpic
  2. Androctonin [58259] (1)
    1. Androctonin [58260]
      1. Scorpion (Androctonus australis) [TaxId: 6858] [58261] (1) picpic
  3. Gomesin [75725] (1)
    1. Gomesin [75726]
      1. Mygalomorphae spider (Acanthoscurria gomesiana) [TaxId: 115339] [75727] (1) picpic
  4. Tachyplesin I [82958] (2)
    1. Tachyplesin I [82959]
      horseshoe crab antimicrobial peptide
      1. Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853] [82960] (4) picpic
      2. synthetic, polyphemusin I [111497] (1) picpic
  5. theta defensin-like [58262] (2)
    1. Protegrin 1 (PG1) [58263]
      1. Pig (Sus scrofa) [TaxId: 9823] [58264] (1) picpic
    2. RTD-1 [64621]
      a cyclic antimicrobial defensin from rhesus macaque leukocytes
      1. Synthetic, based on Rhesus macaque sequence [64622] (1) picpic
  6. Lactoferricin B (lfcinb) [58265] (1)
    1. Lactoferricin B (lfcinb) [58266]
      Antimicrobial peptide derived from bovine lactoferrin
      1. Synthetic, based on Bos taurus sequence [58267] (1) picpic
  7. Hepcidin [82961] (2)
    1. Hepcidin [82962]
      1. Synthetic, based on human sequence [82963] (2) picpic
      2. synthetic, based on the hybrid white striped bass sequence [118385] (1) picpic
        SQ P82951 65-85
  8. Cyclic trypsin inhibitor STFI-1 [90265] (1)
    1. Cyclic trypsin inhibitor STFI-1 [90266]
      1. Sunflower (Helianthus annuus l.) [TaxId: 4232] [90267] (2) picpic

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk