Structural Classification of Proteins
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Fold: Antimicrobial helix

antibiotic peptide

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: Antimicrobial helix [58268]
    antibiotic peptide

Superfamilies:

  1. Antimicrobial helix [58269] (5)
    not a true superfamily
    link to SUPERFAMILY database - Superfamily
    1. Magainin [58270] (2)
      1. Magainin 2 [58271]
        1. Xenopus laevis [TaxId: 8355] [58272] (2)
          1. 2mag picpic
            1. chain a [46075] picpiclink
          2. 1dum picpic
            bound to phospholipid vesicles
            1. chain a [59136] picpiclink
            2. chain b [59137] picpiclink
      2. Cecropin A-Magainin 2 hybrid peptide [58273]
        1. synthetic, hybrid of Hyalophora cecropia and Xenopus laevis sequences [58274] (10)
          1. 1d9l picpic
            1. chain a [46080] picpiclink
          2. 1f0f picpic
            1. chain a [46083] picpiclink
          3. 1f0h picpic
            1. chain a [46085] picpiclink
          4. 1f0e picpic
            1. chain a [46076] picpiclink
          5. 1f0d picpic
            1. chain a [46081] picpiclink
          6. 1d9o picpic
            1. chain a [46077] picpiclink
          7. 1f0g picpic
            1. chain a [46084] picpiclink
          8. 1d9j picpic
            1. chain a [46082] picpiclink
          9. 1d9m picpic
            1. chain a [46079] picpiclink
          10. 1d9p picpic
            1. chain a [46078] picpiclink
    2. Moricin [75728] (2)
      1. Moricin [75729]
        1. Silkworm (Bombyx mori) [TaxId: 7091] [75730] (1)
          1. 1kv4 picpic
            1. chain a [73051] picpiclink
        2. Manduca sexta [TaxId: 7130] [161288] (1)
          1. 2jr8 picpic
            automatically matched to d1kv4a_
            1. region a:2-41 [148184] picpiclink
    3. Tachykinin peptides [82964] (3)
      1. Kassinin [82965]
        1. Frog (Kassina senegalensis) [TaxId: 8415] [82966] (1)
          1. 1myu picpic
            1. chain a [79677] picpiclink
      2. Eledoisin [82967]
        1. Octopod (Eledone moschata) [TaxId: 6641] [82968] (1)
          1. 1mxq picpic
            1. chain a [79670] picpiclink
      3. Neurokinin A [103706]
        1. Synthetic, mammalian sequence [103707] (1)
          1. 1n6t picpic
            1. chain a [91690] picpiclink
    4. Cytotoxic linear peptide IsCT [118386] (1)
      1. Cytotoxic linear peptide IsCT [118387]
        1. Scorpion (Opisthacanthus madagascariensis) [TaxId: 167108] [118388] (4)
          SQ Q8MMJ7 24-36
          1. 1t52 picpic
            1. chain a [112251] picpiclink
          2. 1t54 picpic
            1. chain a [112252] picpiclink
          3. 1t51 picpic
            1. chain a [112250] picpiclink
          4. 1t55 picpic
            1. chain a [112253] picpiclink
    5. Distinctin [144312] (2)
      1. Distinctin chain B [144313]
        1. synthetic [144314] (2)
          1. 1xkm picpicxrefxref
            1. region b:1-25 [122083] picpiclink
          2. 1xkm picpicxrefxref
            automatically matched to 1XKM B:1-25
            1. region d:1-25 [122085] picpiclink
      2. Distinctin chain A [144315]
        1. synthetic [144316] (2)
          1. 1xkm picpicxrefxref
            1. region c:1-22 [122084] picpiclink
          2. 1xkm picpicxrefxref
            1. region a:1-22 [122082] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk