Structural Classification of Proteins
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Superfamily: HIV-1 gp41 fragments

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: HIV-1 gp41 fragments [70010]
  4. Superfamily: HIV-1 gp41 fragments [70011]
    link to SUPERFAMILY database - Superfamily

Families:

  1. HIV-1 gp41 fragments [70012] (4)
    1. HIV-1 gp41 TRP-rich peptide [70013]
      1. Synthetic [70014] (2)
        1. 1jau picpic
          bound to dpc micelles
          1. chain a [66474] picpiclink
        2. 1jav picpic
          bound to dpc micelles
          1. chain a [66475] picpiclink
    2. Peptide mimicking the loop 600-612 [82981]
      1. Synthetic [82982] (8)
        1. 1j9v picpic
          1. chain a [84136] picpiclink
        2. 1jar picpic
          1. chain a [84142] picpiclink
        3. 1jc8 picpic
          1. chain a [84153] picpiclink
        4. 1j8z picpic
          1. chain a [84134] picpiclink
        5. 1jaa picpic
          1. chain a [84137] picpiclink
        6. 1jcp picpic
          1. chain a [84166] picpiclink
        7. 1im7 picpic
          cyclic analogue
          1. chain a [76752] picpiclink
        8. 1j8n picpic
          1. chain a [84133] picpiclink
    3. Fragment 659-671 13-mer peptide [82983]
      2f5 mab epitope
      1. Synthetic [82984] (3)
        1. 1mzi picpic
          1. chain a [91498] picpiclink
        2. 1lcx picpic
          1. chain a [77883] picpiclink
        3. 1lb0 picpic
          1. chain a [77868] picpiclink
    4. N-Terminal fusion peptide [90288]
      1. Synthetic [90289] (1)
        1. 1p5a picpic
          1. chain a [87795] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk